BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,680,496	(C)_5→4	coding (323/729 nt)	rstA →	response transcriptional regulatory protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,680,492	0	C	.	100.0%	641.3 / NA	140	coding (319/729 nt)	rstA	response transcriptional regulatory protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (69/71); total (69/71)

Only 100 of 166 total aligned reads displayed.

GACCGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGCCCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGTCTC  >  NC_000913/1680400‑1680579

gACCGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGc                                                                                         >  1:2709183/1‑93 (MQ=255)

gACCGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGc                                                                                         <  1:3388150/93‑1 (MQ=255)

 aCCGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcc                                                                                        >  1:1792622/1‑93 (MQ=255)

   cGATTGTTCTTCTACCCTCTCTCGATAGCGATATGAACCACATCCGGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccc                                                                                      <  2:4442749/93‑1 (MQ=255)

   cGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccc                                                                                      <  2:1202253/93‑1 (MQ=255)

    gATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccct                                                                                     <  1:917717/93‑2 (MQ=255)

    gATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccct                                                                                     >  1:2848247/1‑92 (MQ=255)

    gATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGAAGcccct                                                                                     >  2:1969692/1‑92 (MQ=255)

     aTTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccctg                                                                                    <  1:1548570/93‑3 (MQ=255)

      ttGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccctgc                                                                                   <  2:246809/93‑4 (MQ=255)

       tGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccctgct                                                                                  <  2:2163594/93‑5 (MQ=255)

        gTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCctgctg                                                                                >  1:2102129/1‑93 (MQ=255)

        gTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCctgctg                                                                                >  1:2263898/1‑93 (MQ=255)

        gTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCctgctg                                                                                >  2:3080992/1‑93 (MQ=255)

         ttcttcTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGt                                                                               >  1:141085/1‑93 (MQ=255)

          tcttctAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGtt                                                                              <  2:2243966/93‑1 (MQ=255)

           cttctAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGttt                                                                             <  2:945249/93‑1 (MQ=255)

           cttctAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGttt                                                                             >  2:4360121/1‑93 (MQ=255)

            ttctAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGtttt                                                                            >  2:2712130/1‑93 (MQ=255)

              ctAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGc                                                                          <  2:118018/93‑1 (MQ=255)

                  ccTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAgc                                                                      <  1:2046935/93‑1 (MQ=255)

                  ccTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAgc                                                                      <  2:660182/93‑1 (MQ=255)

                    tctctcGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAgcgc                                                                    >  2:345027/1‑93 (MQ=255)

                      tctcGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGt                                                                  >  2:4156505/1‑93 (MQ=255)

                        tcGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGttt                                                                <  2:4110925/93‑1 (MQ=255)

                        tcGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGttt                                                                >  1:4406227/1‑93 (MQ=255)

                           aTAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACg                                                             >  1:4721635/1‑93 (MQ=255)

                            tAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGt                                                            >  1:2282523/1‑93 (MQ=255)

                            tAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGt                                                            >  1:4381333/1‑93 (MQ=255)

                             aGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGtt                                                           <  2:2037876/93‑1 (MQ=255)

                             aGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGtt                                                           <  1:86183/93‑1 (MQ=255)

                              gCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGttt                                                          >  1:4576402/1‑93 (MQ=255)

                              gCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGttt                                                          >  2:2217867/1‑93 (MQ=255)

                                 atatGCACCACATCCGGGCACTGGAAATGGGTGCCTGCGACTATATTCGCAAAACGACG‑CCCCTGCGGTTTTGCTAGCGCGTTTACGTTTGCa                                                       <  1:2663776/93‑1 (MQ=255)

                                 atatGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCa                                                       >  1:3054272/1‑93 (MQ=255)

                                  tatGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCAt                                                      <  1:3471464/93‑1 (MQ=255)

                                   atGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCAtt                                                     >  1:3692105/1‑93 (MQ=255)

                                    tGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCAttt                                                    >  2:4543343/1‑93 (MQ=255)

                                     gAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTg                                                   <  2:1476391/93‑1 (MQ=255)

                                       aCCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCg                                                 <  2:468539/93‑1 (MQ=255)

                                        ccACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGt                                                >  1:1101381/1‑93 (MQ=255)

                                         cacaTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTc                                               <  2:2881187/93‑1 (MQ=255)

                                         cacaTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTc                                               <  1:3667544/93‑1 (MQ=255)

                                         cacaTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTc                                               <  1:1220852/93‑1 (MQ=255)

                                         cacaTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTc                                               <  1:1314725/93‑1 (MQ=255)

                                          acaTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCa                                              >  2:3457227/1‑93 (MQ=255)

                                           caTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAg                                             <  2:2003441/93‑1 (MQ=255)

                                           caTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAg                                             <  2:1057431/93‑1 (MQ=255)

                                           caTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGAGTCAg                                             >  1:4538593/1‑93 (MQ=255)

                                            aTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGa                                            >  1:557896/1‑93 (MQ=255)

                                             tCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGaa                                           >  1:709347/1‑93 (MQ=255)

                                             tCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGaa                                           >  1:443796/1‑93 (MQ=255)

                                               cTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATg                                         >  2:3680637/1‑93 (MQ=255)

                                               cTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATg                                         >  2:3522728/1‑93 (MQ=255)

                                               cTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATg                                         >  1:3756534/1‑93 (MQ=255)

                                                tGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGa                                        <  2:1444068/93‑1 (MQ=255)

                                                 ggCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAg                                       >  2:1249529/1‑93 (MQ=255)

                                                  gCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGc                                      <  1:2679131/93‑1 (MQ=255)

                                                  gCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGc                                      <  1:1076311/93‑1 (MQ=255)

                                                   cACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCa                                     <  2:4728157/93‑1 (MQ=255)

                                                   cACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCa                                     >  1:1831971/1‑93 (MQ=255)

                                                   cACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCa                                     <  2:2589356/93‑1 (MQ=255)

                                                    aCTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCaa                                    <  2:3779319/93‑1 (MQ=255)

                                                     cTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCaac                                   >  1:3621085/1‑92 (MQ=255)

                                                      tGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGc                                  >  2:2066856/1‑93 (MQ=255)

                                                       ggAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGcc                                 >  2:1687980/1‑93 (MQ=255)

                                                         aaaTGGGTGCCTGCGACTATATTATCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCcac                               <  2:214553/93‑1 (MQ=255)

                                                             gggTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTg                           <  1:3910003/93‑1 (MQ=255)

                                                              ggTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGa                          <  2:2850236/93‑1 (MQ=255)

                                                                tGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGAcc                        >  1:1447024/1‑93 (MQ=255)

                                                                 gCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCa                       <  1:2888073/93‑1 (MQ=255)

                                                                   cTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCaca                     >  2:4706817/1‑91 (MQ=255)

                                                                   cTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCaaa                     >  2:1035252/1‑93 (MQ=255)

                                                                     gCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAgg                   <  1:2574888/93‑1 (MQ=255)

                                                                     gCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAgg                   >  1:244847/1‑93 (MQ=255)

                                                                      cGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTCGCGTCAGAATGAGCAAGCCACACTGACCAAAGGt                  <  1:2526055/93‑1 (MQ=255)

                                                                       gACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGCTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTc                 >  2:4253643/1‑93 (MQ=255)

                                                                        aCTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCt                >  2:2748423/1‑93 (MQ=255)

                                                                         cTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCtt               >  2:3334260/1‑93 (MQ=255)

                                                                          tataTTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTc              >  1:2161004/1‑93 (MQ=255)

                                                                          tataTTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTc              >  1:864426/1‑93 (MQ=255)

                                                                           atatTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCa             <  1:4093204/93‑1 (MQ=255)

                                                                           atatTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCa             <  1:2648497/93‑1 (MQ=255)

                                                                           atatTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCa             <  1:2648498/93‑1 (MQ=255)

                                                                            tatTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAg            <  1:3907403/93‑1 (MQ=255)

                                                                            tatTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAg            <  2:3403816/93‑1 (MQ=255)

                                                                            tatTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAg            >  2:21055/1‑93 (MQ=255)

                                                                             atTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAgg           >  2:4651798/1‑93 (MQ=255)

                                                                               tcgcAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGaa         <  1:1172665/90‑1 (MQ=255)

                                                                                ctcAAACCGACG‑CCCCTGCTGTTTTGTTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGaaa        <  1:2085162/93‑1 (MQ=255)

                                                                                 tcAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAAc       >  2:3845317/1‑93 (MQ=255)

                                                                                 tcAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAAc       >  2:502550/1‑93 (MQ=255)

                                                                                 tcAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAAc       >  2:4412322/1‑93 (MQ=255)

                                                                                 tcAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAAc       >  2:779473/1‑93 (MQ=255)

                                                                                   aaaaCGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGt     >  1:2306751/1‑93 (MQ=255)

                                                                                   aaaaCGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGt     <  2:3399147/93‑1 (MQ=255)

                                                                                   aaaaCGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGt     >  2:2245783/1‑93 (MQ=255)

                                                                                    aaaCGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGtc    >  1:2769835/1‑93 (MQ=255)

                                                                                     aaCGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGtct   <  2:1903571/93‑1 (MQ=255)

                                                                                      acgacg‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGtctc  <  1:496390/93‑1 (MQ=255)

GACCGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGCCCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGTCTC  >  NC_000913/1680400‑1680579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`