BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,583,799	(T)_7→6	coding (49/1701 nt)	narQ →	NarQ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,583,793	0	T	.	98.5%	610.1 / 1.3	136	coding (43/1701 nt)	narQ	NarQ
Reads supporting (aligned to +/- strand): ref base T (0/2); new base . (55/79); total (55/81)
Fisher's exact test for biased strand distribution p-value = 5.15e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01

Only 100 of 153 total aligned reads displayed.

TGCGTTTCAGCGAACTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCCTTTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAA  >  NC_000913/2583701‑2583881

tGCGTTTCAGCGAACTGGAACATCAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCCt                                                                                          <  2:2595070/93‑1 (MQ=255)

 gggTTTCAGCGAACTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCCtt                                                                                         <  1:992965/91‑1 (MQ=255)

   gTTTCAGCGAACTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCCtttt                                                                                       >  2:1576762/1‑93 (MQ=255)

   gTTTCAGCGAACTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCCcttt                                                                                       >  2:123657/1‑93 (MQ=255)

       cAGCGAACTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCCttttttac                                                                                   >  1:175297/1‑91 (MQ=255)

        aGCGAACTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCCttttttaca                                                                                  <  1:3554421/93‑4 (MQ=255)

        aGCGAACTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCCttttttaca                                                                                  >  1:1566609/1‑90 (MQ=255)

        aGCGAACTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCCGGCCCCGGGCtccttttct                                                                                  >  2:4204631/1‑91 (MQ=255)

         gCGAACTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCCttttttacat                                                                                 >  2:4001024/1‑89 (MQ=255)

          cGAACTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACAtt                                                                               >  1:2443055/1‑93 (MQ=255)

           gAACTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATtg                                                                              <  1:189255/93‑1 (MQ=255)

             aCTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATtgtg                                                                            <  2:923196/93‑1 (MQ=255)

             aCTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATtgtg                                                                            <  1:4542927/93‑1 (MQ=255)

              cTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGtgc                                                                           >  1:2237228/1‑93 (MQ=255)

              cTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGtgc                                                                           <  1:3430389/93‑1 (MQ=255)

              cTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGtgc                                                                           <  2:789368/93‑1 (MQ=255)

              cTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGtgc                                                                           <  1:4631030/93‑1 (MQ=255)

               tGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGtgct                                                                          >  2:2028162/1‑93 (MQ=255)

               tGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGtgct                                                                          <  2:453351/93‑1 (MQ=255)

                ggAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGtgctg                                                                         >  2:4706957/1‑93 (MQ=255)

                 gAACATTAATGTTTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGtgctgc                                                                        >  2:2043695/1‑93 (MQ=255)

                 gAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGtgctgc                                                                        <  2:1015589/93‑1 (MQ=255)

                 gAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGtgctac                                                                        >  1:3682825/1‑91 (MQ=255)

                  aaCATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTgctgct                                                                       <  1:691139/93‑1 (MQ=255)

                   aCATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGctgctg                                                                      <  1:4297058/93‑1 (MQ=255)

                     aTTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTTTc                                                                    >  1:3373226/1‑93 (MQ=255)

                     aTTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTc                                                                    >  1:2061588/1‑93 (MQ=255)

                     aTTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTc                                                                    <  2:559350/93‑1 (MQ=255)

                      ttAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCg                                                                   >  1:1650512/1‑93 (MQ=255)

                      ttAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCg                                                                   >  1:1750316/1‑93 (MQ=255)

                      ttAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCg                                                                   >  2:1482489/1‑93 (MQ=255)

                       tAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGa                                                                  <  2:2368729/93‑1 (MQ=255)

                        aaTGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGAt                                                                 <  2:2520113/93‑1 (MQ=255)

                        aaTGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGAt                                                                 <  2:2520112/93‑1 (MQ=255)

                          tGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTc                                                               <  1:2907457/93‑1 (MQ=255)

                           gATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGCTTCt                                                              >  1:1777474/1‑93 (MQ=255)

                           gATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCt                                                              <  1:2059051/93‑1 (MQ=255)

                            aTTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCtt                                                             <  2:1435611/93‑1 (MQ=255)

                            aTTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCtt                                                             <  2:1808249/93‑1 (MQ=255)

                            aTTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCtt                                                             <  1:2682263/93‑1 (MQ=255)

                               ttttGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTcc                                                          >  1:1463775/1‑93 (MQ=255)

                                 ttGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑‑TTTTTACATTGTGCTGCTGTCGATTCTTTCCACg                                                       <  1:585718/93‑1 (MQ=255)

                                  tgtgGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACg                                                       <  1:580561/93‑1 (MQ=255)

                                   gtgGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACgg                                                      <  1:1200694/93‑1 (MQ=255)

                                    tgGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACggg                                                     >  2:4127175/1‑93 (MQ=255)

                                     ggAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGt                                                    <  1:4060751/93‑1 (MQ=255)

                                      gagaAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCCCGGGTa                                                   >  1:1593392/1‑93 (MQ=255)

                                        gaagaCGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATc                                                 >  2:554444/1‑93 (MQ=255)

                                          agaCGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGc                                               >  2:3796531/1‑93 (MQ=255)

                                           gaCGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGct                                              >  1:2907790/1‑93 (MQ=255)

                                           gaCGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGct                                              <  1:2276822/93‑1 (MQ=255)

                                            aCGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGctc                                             <  1:119170/93‑1 (MQ=255)

                                             cgcgTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGctct                                            <  1:4026085/93‑1 (MQ=255)

                                             cgcgTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGctct                                            <  1:3100408/93‑1 (MQ=255)

                                                gtgtGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCt                                         >  2:1840441/1‑93 (MQ=255)

                                                  gtgATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTaa                                       >  2:1233247/1‑93 (MQ=255)

                                                   tgATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCTGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAAc                                      >  2:4675632/1‑93 (MQ=255)

                                                   tgATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAAc                                      >  1:1346789/1‑93 (MQ=255)

                                                   ggATTGTAAATCGACCCGTGTCGGCCAGTCTGGCCCGGGCCTTTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCGCTGCTaa                                       <  2:2076232/92‑1 (MQ=255)

                                                     aTTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAActc                                    <  2:3370310/93‑1 (MQ=255)

                                                      ttGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAActct                                   >  1:449577/1‑93 (MQ=255)

                                                      ttGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAActct                                   <  1:3501808/93‑1 (MQ=255)

                                                          tAACCGACCCGTCTCGGCCAGTCTGGCACGGGCGTTTTTTGACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTGAAGCTGGc                                <  2:2702842/93‑1 (MQ=255)

                                                          tAAACGACCCGTCTCGGCCCGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGGATCGGTCTGCTAACTCTGGCg                               >  1:414474/1‑93 (MQ=255)

                                                           aaaCGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGa                              <  2:4449729/93‑1 (MQ=255)

                                                           aaaCGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGa                              >  2:353377/1‑93 (MQ=255)

                                                            aaCGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAg                             >  1:3017297/1‑93 (MQ=255)

                                                            aaCGACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAg                             <  1:2652183/93‑1 (MQ=255)

                                                              cGACCCGTCTCGGCCAGTCTGGCCCGGGCCTTTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGc                            <  2:3927565/93‑1 (MQ=255)

                                                               gACCCGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAg                          >  2:111069/1‑93 (MQ=255)

                                                                 cccGTCTCGGCCAGTCTGGCCCGGGCCTTTTTTT‑CATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGtt                        <  2:1571994/93‑1 (MQ=255)

                                                                 cccGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGtt                        <  2:4592615/93‑1 (MQ=255)

                                                                  ccGCCTCGGCCAGTCTGCCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTCTCCACGGGTATCGCTCTGCTAACTCTGTCAAGCAGttt                       <  2:1600450/93‑1 (MQ=255)

                                                                   cGTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTg                      <  1:1497889/93‑1 (MQ=255)

                                                                    gTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTgc                     <  1:4709711/93‑1 (MQ=255)

                                                                    gTCTCGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTGCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTgc                     <  2:4387273/93‑1 (MQ=255)

                                                                     tctcGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTgcg                    >  1:1871323/1‑93 (MQ=255)

                                                                      ctcGGCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTgcgc                   <  2:4230585/93‑1 (MQ=255)

                                                                         ggCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGAc                <  2:2865240/93‑1 (MQ=255)

                                                                         ggCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGAc                <  1:1734965/93‑1 (MQ=255)

                                                                         ggCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGAc                <  2:3170974/93‑1 (MQ=255)

                                                                         ggCCAGTCTGGCCCGGGCC‑TTTTTAACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGAc                <  2:1250311/93‑1 (MQ=255)

                                                                          gCCAGTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACg               >  1:3886702/1‑93 (MQ=255)

                                                                             cgTCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTg            <  1:801430/92‑1 (MQ=255)

                                                                               tCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAg          <  1:3557805/93‑1 (MQ=255)

                                                                               tCTGGCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAg          <  1:3647378/93‑1 (MQ=255)

                                                                                  ggCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCt       >  1:3276851/1‑93 (MQ=255)

                                                                                  ggCCCGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCt       >  1:3276852/1‑93 (MQ=255)

                                                                                    cccGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTAt     >  2:3761450/1‑93 (MQ=255)

                                                                                    cccGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTAt     <  2:2260114/93‑1 (MQ=255)

                                                                                     ccGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATc    >  2:1657389/1‑93 (MQ=255)

                                                                                     ccGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATc    >  2:2985435/1‑93 (MQ=255)

                                                                                     ccGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGGTTGCGCGACGGTGAGGatata    >  2:1828341/1‑92 (MQ=255)

                                                                                     ccGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATAGCTCTGCTTACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATc    >  2:1219396/1‑93 (MQ=255)

                                                                                      cGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCa   >  2:3611625/1‑93 (MQ=255)

                                                                                      cGGGCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCa   >  2:1146627/1‑93 (MQ=255)

                                                                                       gggCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCaa  <  2:1137269/93‑1 (MQ=255)

                                                                                       gggCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCaa  <  1:3361223/93‑1 (MQ=255)

                                                                                       gggCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCaa  >  2:673470/1‑93 (MQ=255)

                                                                                       gggCC‑TTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCaa  >  2:1635660/1‑93 (MQ=255)

TGCGTTTCAGCGAACTGGAACATTAATGATTTTTTGTGGAGAAGACGCGTGTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCCTTTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAA  >  NC_000913/2583701‑2583881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`