| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,957,560 | +C | intergenic (‑129/‑732) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,957,558 | 1 | . | C | 98.5% | 435.7 / ‑0.9 | 135 | intergenic (‑127/‑734) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Reads supporting (aligned to +/- strand): ref base . (0/2); new base C (57/75); total (57/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.16e-01 | |||||||||||
Only 100 of 143 total aligned reads displayed.
AGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑T‑G‑C‑TCGCA‑GGT‑C‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG > NC_000913/3957471‑3957645 | aGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGT‑c‑cc < 1:3528767/93‑2 (MQ=255)aGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGT‑c‑cc > 1:2983036/1‑92 (MQ=255)aGCATAATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGT‑c‑cc < 2:596647/93‑2 (MQ=255) aTGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCCGC‑G‑CTTCGCA‑GGT‑c‑cctca > 2:2461867/1‑89 (MQ=255) gATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAg > 2:1798487/1‑93 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAggg < 2:3044564/93‑1 (MQ=255) tCCGAAGATGCTAACGTATTTGTCAGTCAGGGAGTGGCTGGAACATATATGGAAAAACCCGGGAAATTCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAggg < 2:4234829/93‑1 (MQ=255) ccGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGG‑CTTCGCA‑GGTCC‑CTCAAgggg < 1:4260472/93‑1 (MQ=255) gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGgag < 2:4484044/93‑1 (MQ=255) aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGaa < 1:1396783/93‑1 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCC‑GGTCC‑CTCAAGGGGAGaaa > 1:4350201/1‑93 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGaaa > 1:2899088/1‑93 (MQ=255) tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGGAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CCCCAGGGGAGAAAAc > 2:1450562/1‑93 (MQ=255) tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAAc > 2:2159224/1‑93 (MQ=255) tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTa < 2:4326811/93‑1 (MQ=255) tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTa > 2:2468805/1‑93 (MQ=255) tAACGTAATTGTCAGACAGGAAATGGCTAGTACATATATGGCAAAAGCCAGGAAAATCCGA‑G‑CTTCGCA‑GGT‑CACTCAAGGGAAGAAAACTTa < 1:4196628/93‑1 (MQ=255) agcGTAATGGTAAGTCAGGGAGTGGCTGGTACATATAGGGCAAAAGCCGGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAg < 2:1742699/91‑1 (MQ=255) aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAg > 1:3451878/1‑93 (MQ=255) aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAg > 2:3003532/1‑93 (MQ=255) aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGG‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAg < 2:4744306/93‑1 (MQ=255) aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAgg < 2:1288017/93‑1 (MQ=255) gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGc > 2:4378360/1‑93 (MQ=255) gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGc > 1:1425633/1‑93 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCctc > 1:4702288/1‑93 (MQ=255) ttGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCctct < 2:3620030/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATGTATGGCAAAAGCCGGGAAAATCCGG‑G‑CTTCGCAGGGC‑C‑CTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:282603/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:2779441/93‑1 (MQ=255) gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTAt < 1:4420672/93‑1 (MQ=255) gtcagtcaGGGAGTGCCGGGTACATATAGGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTAt < 1:3541469/93‑1 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATg < 2:1909374/93‑1 (MQ=255) cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTAtcg > 2:232461/1‑91 (MQ=255) cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATgg < 1:1625363/93‑1 (MQ=255) gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCGAGGGGAGAAAACTTAGGGCCTCTATGGGc > 2:4689933/1‑93 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt > 2:754053/1‑93 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGG‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt < 2:114639/93‑1 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCAGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt < 1:1159694/93‑1 (MQ=255) cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑GGG‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTa > 1:1629085/1‑93 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 2:4616872/1‑93 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa > 2:2705324/1‑93 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa < 1:992955/93‑1 (MQ=255) ggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaa > 1:2598603/1‑93 (MQ=255) ggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaa < 2:3403298/93‑1 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa > 2:2403508/1‑93 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 1:852960/93‑1 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa > 1:4074900/1‑93 (MQ=255) gAGTGACTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 1:1126539/93‑1 (MQ=255) gTGGCTGGTCCATATATGGCAAAAGCCCGGAAAAACCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAAGGCCTCTATGGGATACAAAGt > 2:2012928/1‑93 (MQ=255) gTGGCTGGTACATATATGGCAAAAGCCGGGAAAATCC‑G‑GTCTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGt < 1:4255012/93‑1 (MQ=255) gTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGt < 1:1397864/93‑1 (MQ=255) tGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc > 1:777776/1‑93 (MQ=255) tGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc < 2:2284363/93‑1 (MQ=255) tGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc < 1:1024811/93‑1 (MQ=255) cTGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt > 2:1520120/1‑93 (MQ=255) tGGTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAATCTTAGGGCCTCTATGGGCTACAAAGTCATTa < 1:2916445/93‑1 (MQ=255) tGGAACATATATGGCAAACGCCAGAAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa < 2:63370/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACACAGTCATTAt > 1:508743/1‑93 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt > 1:3766076/1‑93 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 2:1636641/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 2:3307059/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 1:3480991/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt > 1:508741/1‑93 (MQ=255) gTACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc < 2:4680445/93‑1 (MQ=255) tACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGTGCTACAAAGTCATTATCg > 2:2970956/1‑93 (MQ=255) tACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGTGCTACAAAGTCATTATCg > 2:2970955/1‑93 (MQ=255) tACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg < 1:2119259/93‑1 (MQ=255) tACATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg > 1:105707/1‑93 (MQ=255) aCATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg < 1:2497532/93‑1 (MQ=255) cATATATGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg < 1:2074688/93‑1 (MQ=255) tatatGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa > 1:1444537/1‑93 (MQ=255) tatatGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa > 1:875851/1‑93 (MQ=255) tatatGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa > 2:4734310/1‑93 (MQ=255) atatGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt > 1:1822942/1‑93 (MQ=255) tatGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg < 1:744283/93‑1 (MQ=255) atGGCAAAAGCGCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATgg < 2:235256/93‑1 (MQ=255) atGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATgg < 1:2281113/93‑1 (MQ=255) atGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATgg < 2:2005597/93‑1 (MQ=255) tGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt > 1:4104442/1‑93 (MQ=255) tGGCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt > 2:3279773/1‑93 (MQ=255) ggCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtt < 2:326793/93‑1 (MQ=255) ggCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtt < 1:1461593/93‑1 (MQ=255) ggCAAAAGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtt < 2:1647124/93‑1 (MQ=255) cAAAAGCCCGGAAAATCC‑TGG‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat < 1:332671/93‑1 (MQ=255) aaaGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt > 1:2033833/1‑93 (MQ=255) aaGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttt > 1:2035176/1‑93 (MQ=255) aGCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttta < 2:537388/93‑1 (MQ=255) gCCTGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat > 1:1179011/1‑93 (MQ=255) gCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat < 1:2275320/93‑1 (MQ=255) gCCCGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat > 1:3174822/1‑93 (MQ=255) cccGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCCAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt < 1:2167410/93‑1 (MQ=255) cccGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt < 2:3251590/93‑1 (MQ=255) ccGGAAAATCCGG‑G‑CTTCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg > 1:327859/1‑93 (MQ=255) ggcttCGCA‑GGTGC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAg < 2:1957072/89‑1 (MQ=255) gcttCGCA‑GGGCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGc < 1:1688968/90‑1 (MQ=255) ttCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGa > 2:4545842/2‑93 (MQ=255) tCGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGat < 2:4257111/93‑1 (MQ=255) cGCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata < 2:3762992/93‑1 (MQ=255) gCA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat < 2:1789692/93‑1 (MQ=255) cA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATg > 2:3610167/1‑93 (MQ=255) cA‑GGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATg < 1:3824817/93‑1 (MQ=255) | AGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑T‑G‑C‑TCGCA‑GGT‑C‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG > NC_000913/3957471‑3957645 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |