| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,978,570 | (G)6→7 | coding (71/1386 nt) | yifK → | putative amino acid/amine transport protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,978,564 | 1 | . | G | 98.4% | 400.0 / ‑0.9 | 124 | coding (65/1386 nt) | yifK | putative amino acid/amine transport protein |
| Reads supporting (aligned to +/- strand): ref base . (0/2); new base G (51/71); total (51/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01 | |||||||||||
Only 100 of 160 total aligned reads displayed.
AAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCAT > NC_000913/3978472‑3978651 | aaGCGTGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑g > 2:4543692/1‑93 (MQ=255) aaGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑g < 1:3025301/93‑1 (MQ=255) aaGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑g < 2:4185198/93‑1 (MQ=255) aGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑gg < 2:2280411/93‑1 (MQ=255) aGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑gg < 1:684845/93‑1 (MQ=255) gCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑ggg < 2:3327818/93‑1 (MQ=255) gCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑ggg < 2:436175/93‑1 (MQ=255) gCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑ggg > 1:970553/1‑93 (MQ=255) gCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑ggg < 1:1653893/93‑1 (MQ=255) aTGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑ggg‑g‑g > 1:1971331/1‑93 (MQ=255) tGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑ggg‑g‑gg < 1:3996537/93‑1 (MQ=255) tGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑ggg‑g‑gg > 1:331716/1‑93 (MQ=255) gCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑ggg‑g‑ggg > 2:1985476/1‑92 (MQ=255) gCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑ggg‑g‑ggg > 2:216266/1‑92 (MQ=255) gCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑ggg‑g‑ggg > 2:4569979/1‑92 (MQ=255) aaaCACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑ggg‑g‑gggca > 2:2112199/1‑90 (MQ=255) aaaCACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑ggg‑g‑gggca < 2:3534009/93‑4 (MQ=255) aacacaacacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑ggg‑g‑gggcac > 2:4245032/1‑89 (MQ=255) aacacaacacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑ggg‑g‑gggcac > 1:4244990/1‑89 (MQ=255) cacaacacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCa < 1:1965211/93‑1 (MQ=255) ccacacGAGGGTTAATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCAAACTCATCGCCC‑TG‑GGG‑G‑GGCACCAtt < 2:1154544/91‑1 (MQ=255) caacacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCAtt < 1:1064135/93‑1 (MQ=255) acacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTgg < 1:2712430/93‑1 (MQ=255) acacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTgg < 2:1932883/93‑1 (MQ=255) gAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTc > 2:1759980/1‑93 (MQ=255) gAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTc < 1:3571023/93‑1 (MQ=255) gAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTc < 1:2306240/93‑1 (MQ=255) aGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCg > 1:3272005/1‑93 (MQ=255) ggATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCgg < 1:2470962/93‑1 (MQ=255) gATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGc > 2:4165052/1‑93 (MQ=255) tttATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCt > 1:535408/1‑93 (MQ=255) ttATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTg < 2:213183/93‑1 (MQ=255) tATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGt < 2:3277305/93‑1 (MQ=255) tGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGttt > 2:2273255/1‑93 (MQ=255) tGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGttt < 2:4354289/93‑1 (MQ=255) ggCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTa < 2:3476747/93‑1 (MQ=255) ggCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTa < 2:4262503/93‑1 (MQ=255) ggCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTa < 1:1147137/93‑1 (MQ=255) gCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGGACCATTGGCGTCGGCCTGTTTAt > 2:3377866/1‑93 (MQ=255) gCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTAt < 1:1607419/93‑1 (MQ=255) cAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TGGGGG‑G‑GGCACCATTGGCGTCGGCCTGTTTAt < 2:1311776/93‑1 (MQ=255) cAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATg > 1:1483753/1‑93 (MQ=255) cAGACAACAACCCAGAGCTGCAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTAtc < 1:3153795/93‑2 (MQ=255) aGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATgg < 2:3363165/93‑1 (MQ=255) gATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATggg < 2:2594527/93‑1 (MQ=255) gATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATggg > 2:4684646/1‑93 (MQ=255) gATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCA‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATggg > 1:2974556/1‑93 (MQ=255) aTAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATgggg < 1:2895800/93‑1 (MQ=255) aaCAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGgc < 1:731772/93‑1 (MQ=255) aaCAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGgc > 1:156838/1‑93 (MQ=255) aaCCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGgccgcc > 1:1219566/1‑93 (MQ=255) aaCCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGgccgcc > 1:2380559/1‑93 (MQ=255) aaCCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGgccgcc < 1:3351936/93‑1 (MQ=255) aCCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCa < 2:2184394/93‑1 (MQ=255) ccAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAg > 2:3525766/1‑93 (MQ=255) ccAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAg < 2:1189972/93‑1 (MQ=255) cAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGt > 2:39165/1‑93 (MQ=255) agagCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGtc > 1:3467738/1‑92 (MQ=255) agCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTAcc < 2:609493/93‑1 (MQ=255) gCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTAccc > 2:490638/1‑93 (MQ=255) gCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTAccc < 2:2803486/93‑1 (MQ=255) gCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTAccc < 1:2439267/93‑1 (MQ=255) cTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCt > 1:2786513/1‑93 (MQ=255) tACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTg > 1:2606713/1‑93 (MQ=255) aGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGaaa < 1:1802302/93‑1 (MQ=255) aGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGaaa < 2:813824/93‑1 (MQ=255) gCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTTTGGGGGCCGCCAGTACCCTGCAAt > 2:3692110/1‑93 (MQ=255) gCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAAt > 1:541099/1‑93 (MQ=255) gggCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATgggc < 1:537381/93‑1 (MQ=255) gggCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATgggc < 2:3712826/93‑1 (MQ=255) gCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATgggccg < 1:2080679/93‑1 (MQ=255) gCTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATgggccg < 1:1056724/93‑1 (MQ=255) cTGGAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATgggccgg < 1:3562497/93‑1 (MQ=255) gAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGGACCATTGGCGTCGGCCTGTTTATGGGGGCAGCCAGTACCCTGAAATgggcagggcc > 1:895353/1‑93 (MQ=255) gAAGCTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATgggccgggcc < 1:3459047/93‑1 (MQ=255) cTCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATcc < 2:2767404/93‑1 (MQ=255) tCGACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCg < 1:675714/93‑1 (MQ=255) gACATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTa > 1:3598984/1‑93 (MQ=255) aCATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAt < 1:861608/93‑1 (MQ=255) aCATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAt < 1:4457476/93‑1 (MQ=255) cATATCGATCTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAtt < 1:4642254/93‑1 (MQ=255) cATATCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAtt < 2:4550939/93‑1 (MQ=255) atatCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGGCATCCGTAttg > 1:4148077/1‑93 (MQ=255) atatCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAttg < 1:133168/93‑1 (MQ=255) atatCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAttg > 2:1285968/1‑93 (MQ=255) tatCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAttgt > 1:3833681/1‑93 (MQ=255) tatCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAttgt > 2:4404369/1‑93 (MQ=255) aatCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAttgt < 1:998689/92‑1 (MQ=255) atCGACCTCATCGCCC‑TG‑GGG‑G‑GGCACCATAGGCGTCGACCTGTTTATGGGTGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAttgtt < 1:3078216/93‑1 (MQ=255) atCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAttgtt < 1:3975602/93‑1 (MQ=255) atCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAttgtt < 1:4160700/93‑1 (MQ=255) tCGAACTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTAttgttg > 2:2627376/1‑93 (MQ=255) aCTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCt < 1:624180/93‑1 (MQ=255) cTCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCta > 2:1253490/1‑93 (MQ=255) tCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCtat > 2:2405224/1‑93 (MQ=255) tCATCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCtat > 2:3223517/1‑93 (MQ=255) cATCGCCCGG‑‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCtata < 1:3606334/93‑1 (MQ=255) cATCGCCC‑T‑‑GGG‑GAGGCACCATTGGCGTCGGCCTGTTTATGGGGCCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCtata < 2:1925594/93‑1 (MQ=255) tCGCCC‑TG‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATatc < 1:757348/93‑1 (MQ=255) cGCCC‑T‑‑GGGTG‑GGCCCCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATatca < 2:869415/93‑1 (MQ=255) | AAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑T‑‑GGG‑G‑GGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCAT > NC_000913/3978472‑3978651 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |