| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,103,519 | +T | intergenic (‑268/‑530) | cpxR ← / → yiiP | transcriptional regulator in 2‑component system/putative transport system permease protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,103,519 | 1 | . | T | 99.5% | 743.9 / ‑3.8 | 213 | intergenic (‑268/‑530) | cpxR/yiiP | transcriptional regulator in 2‑component system/putative transport system permease protein |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base T (100/112); total (100/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
Only 100 of 248 total aligned reads displayed.
GGCCTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAG‑AC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCC > NC_000913/4103427‑4103611 | ggCCTCACCGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTAcgcagcgcag < 2:4713769/93‑1 (MQ=255)ggCCTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTAcgcagcgcag < 2:2510075/93‑1 (MQ=255)ggCCTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTAcgcagcgcag > 1:1746661/1‑93 (MQ=255)ggCCTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGGGAAGAACTTAcgcagcgcag > 1:1004266/1‑93 (MQ=255) gCCTCAACGCTGGCAGTCAGTTCATTAAGCCACGCCGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGCGAAGAACTTACGCAGcgcag‑a > 2:2998636/1‑93 (MQ=255) ccTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTAcgcagcgcagta < 2:2815203/93‑3 (MQ=255) cTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTAcgcagcgcagtac < 1:1933949/93‑4 (MQ=255) cTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTAcgcagcgcagtac > 1:1928174/1‑90 (MQ=255) tCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTAcgcagcgcagtacg > 1:2763423/1‑89 (MQ=255) tCAACGCTGGCAGTAAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGCCGATAACTGCCATCCGGGTGAAGAACTTAACCAGcgcag‑aacg > 2:1110610/1‑90 (MQ=255) aaCGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCgcagtac‑gca > 2:1158546/1‑93 (MQ=255) cGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCgcagtac‑gcaga < 1:4351917/93‑1 (MQ=255) ggCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCa < 1:1484449/93‑1 (MQ=255) gCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCat < 1:2805539/93‑1 (MQ=255) cagtcagtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCata < 2:3595255/93‑1 (MQ=255) agtcagtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCatat < 2:3480598/93‑1 (MQ=255) agtcagtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCatat < 2:1837806/93‑1 (MQ=255) agtcagtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCatat > 2:4000443/1‑93 (MQ=255) gtcagtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATg < 1:4039157/93‑1 (MQ=255) gtcagtTAATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATg > 2:4675222/1‑93 (MQ=255) tcagtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGt > 2:2922130/1‑93 (MQ=255) tcagtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGt < 2:1182077/93‑1 (MQ=255) tcagtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGt < 2:3858596/93‑1 (MQ=255) cagtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGtt < 1:2275377/93‑1 (MQ=255) cagtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGtt < 1:338746/93‑1 (MQ=255) agtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTc > 1:4191283/1‑93 (MQ=255) ttCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCgc > 2:1564642/1‑92 (MQ=255) ttCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTACGa < 2:902990/93‑1 (MQ=255) tCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGAc > 2:378550/1‑93 (MQ=255) aTTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACgg > 2:832616/1‑93 (MQ=255) aTTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACAGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACgg > 2:682466/1‑93 (MQ=255) ttAAGCCACACTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGc > 2:2126157/1‑93 (MQ=255) tAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCa < 1:1816007/93‑1 (MQ=255) ccACGCTGCTGAAGTCGGTTCGGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAg < 1:3471771/93‑1 (MQ=255) ccGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGtt < 2:1346870/92‑1 (MQ=255) aCGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGtt > 1:4182116/1‑93 (MQ=255) aCGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGtt > 1:2214629/1‑93 (MQ=255) aCGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGtt < 2:1277979/93‑1 (MQ=255) gctgctGAAGTCTGTTCAGGCGATAACTGGCTTCCGGGTGAAGATCTTACGCAGCGCAGAAC‑GCAGAGCCATTTGTTTGACGGCATAAGTTTa > 2:3618348/1‑93 (MQ=255) gctgctGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTa > 1:4642580/1‑93 (MQ=255) tgctgAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAAc > 2:1782061/1‑93 (MQ=255) tgctgAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAAc < 1:2133516/93‑1 (MQ=255) gctgAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAAcc > 1:3328356/1‑93 (MQ=255) ctgAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCg > 2:2316502/1‑93 (MQ=255) tgAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGa > 2:1053022/1‑93 (MQ=255) gAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGaa < 1:3056543/93‑1 (MQ=255) gAAGTCGGGGCAGGCGATAACTGGGATCCGGGTGAAGAGCTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGaa < 1:3032248/93‑1 (MQ=255) aGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACa < 2:4302027/93‑1 (MQ=255) gTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACAt > 1:1455527/1‑93 (MQ=255) tCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATc < 1:4561805/93‑1 (MQ=255) tCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATc < 1:4487117/93‑1 (MQ=255) ggTTCAGGCTATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTTC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAg < 2:4063589/93‑1 (MQ=255) ggTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAg < 1:37150/93‑1 (MQ=255) gTTCAGGCGATAACTGTCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGc < 1:1995873/93‑1 (MQ=255) gTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGc < 1:3238917/93‑1 (MQ=255) gTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGc < 2:1739613/93‑1 (MQ=255) cAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTc > 2:562608/1‑93 (MQ=255) cAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTc < 2:4599847/93‑1 (MQ=255) aGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTca > 1:2903295/1‑93 (MQ=255) aGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTca > 2:2171961/1‑93 (MQ=255) gCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTcagc < 2:2401855/93‑1 (MQ=255) gCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTcagc > 1:1765868/1‑93 (MQ=255) cGATAACTGGCCTCCGGGTGAAGCACTTCCGCCGCGCAG‑TCACCAGAGCTCTATGTTCGACGGTATAAGTTTAACCGAACATCAGCGTcagca < 1:187052/93‑1 (MQ=255) cGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTcagca < 1:3348604/93‑1 (MQ=255) gATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTcagcag > 2:2105423/1‑93 (MQ=255) gATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTcagcag > 2:2954027/1‑93 (MQ=255) gATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTcagcag > 1:4681049/1‑93 (MQ=255) aTAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGa > 1:3801279/1‑93 (MQ=255) aTAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGa < 1:2046626/93‑1 (MQ=255) aTAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGa > 2:261831/1‑93 (MQ=255) aTAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGa > 2:2689516/1‑93 (MQ=255) aaCTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATg < 2:1698112/93‑1 (MQ=255) aCTGGCATCAGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGc < 2:3147257/93‑1 (MQ=255) atGGCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCg < 2:949444/92‑1 (MQ=255) ggCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGCTGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCgag > 2:1903410/1‑93 (MQ=255) ggCATCCGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCgag > 1:1579638/1‑93 (MQ=255) tCCGGGGGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCt > 2:3382105/1‑93 (MQ=255) ccGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCtt > 1:238515/1‑93 (MQ=255) cGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTa < 1:10342/93‑1 (MQ=255) cGGGTGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTa < 1:3957714/93‑1 (MQ=255) tGAAGAACTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCa > 1:1313073/1‑93 (MQ=255) gaagaaCTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCaa > 1:3979446/1‑93 (MQ=255) gaagaaCTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCaa < 2:165135/93‑1 (MQ=255) aagaaCTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAAc > 2:616183/1‑93 (MQ=255) aagaaCTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAAc > 1:3603167/1‑93 (MQ=255) agaaCTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACa < 1:724118/93‑1 (MQ=255) agaaCTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACa < 1:578689/93‑1 (MQ=255) gaaCTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAg > 1:4082403/1‑93 (MQ=255) gaaCTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAg < 1:2922038/93‑1 (MQ=255) aCTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGc < 2:4250556/93‑1 (MQ=255) aCTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGc < 2:1351675/93‑1 (MQ=255) cTTACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGcc < 1:4409177/93‑1 (MQ=255) ttACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGccc > 2:3353778/1‑93 (MQ=255) ttACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGccc < 2:2324934/93‑1 (MQ=255) tACGCAGCGCAGTAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCg > 1:255640/1‑93 (MQ=255) cgcagcgcagtAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGc < 2:2481946/93‑1 (MQ=255) gcagcgcagtAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCa < 2:4499254/93‑1 (MQ=255) agcgcagtAC‑GCAGAGCCGTATGTTCGACGGCTTAAGTTTGACCTACCCTCAGCGTCAGCAGATGCGAGATCTTATGCAACACGCTCGGCAcc > 2:3286493/1‑92 (MQ=255) agcgcagtAC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACg > 2:3258146/1‑93 (MQ=255) g‑ac‑gcagaGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGcc < 1:3276111/93‑1 (MQ=255) | GGCCTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAG‑AC‑GCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCC > NC_000913/4103427‑4103611 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |