| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,139,669 | +C | coding (233/330 nt) coding (132/159 nt) |
yijI → b4558 ← |
hypothetical protein hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,139,667 | 1 | . | C | 99.5% | 653.4 / ‑4.3 | 201 | coding (231/330 nt) coding (134/159 nt) | yijI b4558 | hypothetical protein hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base C (102/98); total (102/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 220 total aligned reads displayed.
GCTTCCTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑CC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCTTGCCGGACGCGCAT > NC_000913/4139575‑4139754 | gcTTCCTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTg > 1:4680583/1‑93 (MQ=255) cTTCCTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑c < 2:3757353/93‑1 (MQ=255) tCCTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑ccc > 2:4646561/1‑92 (MQ=255) tCCTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑ccc > 2:1372980/1‑92 (MQ=255) cTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAATGGCGCTTTTTGCGTTG‑ccctt > 1:1176269/1‑90 (MQ=255) cTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑ccctt > 2:2692818/1‑90 (MQ=255) tcgtcgGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCgg > 2:4731073/1‑93 (MQ=255) tcgtcgGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCgg > 1:3028267/1‑93 (MQ=255) cgtcgGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGt < 2:2118864/93‑1 (MQ=255) cgtcgGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGt > 1:307531/1‑93 (MQ=255) gtcgGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTc > 2:3658714/1‑93 (MQ=255) tcgGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCa > 2:1240581/1‑93 (MQ=255) gCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTg > 1:3926008/1‑93 (MQ=255) gctgggAAAGCAGAAACTGGCAGTTTACGCCCGCCAGTGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTAAGTgc < 2:627491/89‑1 (MQ=255) cccGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTgcg > 2:1455512/1‑93 (MQ=255) ccGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTgcgc > 1:1330552/1‑93 (MQ=255) ccGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTgcgc > 2:3298696/1‑93 (MQ=255) cGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCa > 1:4201531/1‑93 (MQ=255) cGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCa < 1:717846/93‑1 (MQ=255) ggAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAg > 2:757091/1‑93 (MQ=255) gAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAgg > 1:1984133/1‑93 (MQ=255) aaaTCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGt < 2:3946493/93‑1 (MQ=255) aaTCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGtt > 1:2327104/1‑93 (MQ=255) aTCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTa < 1:2356554/93‑1 (MQ=255) aTCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTa < 1:1127091/93‑1 (MQ=255) aTCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTa < 2:1619549/93‑1 (MQ=255) tCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTAt < 2:3102418/93‑1 (MQ=255) cAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATg < 1:3591604/93‑1 (MQ=255) cAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATg > 2:871860/1‑93 (MQ=255) gTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGcc > 2:3096749/1‑93 (MQ=255) aaCTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCAc < 1:1614383/93‑1 (MQ=255) cTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTc < 1:2623644/93‑1 (MQ=255) tGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCa > 2:2455003/1‑93 (MQ=255) ggCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCaa < 1:2800041/93‑1 (MQ=255) cAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAAtt < 1:1859765/93‑1 (MQ=255) cAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAAtt > 2:2467951/1‑93 (MQ=255) cAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAAtt < 2:2669089/93‑1 (MQ=255) gTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTtg < 2:2965938/93‑1 (MQ=255) ttATCGCCCGCCAGAGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTtgt > 2:2358623/1‑93 (MQ=255) tATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTtgtg > 2:2298171/1‑93 (MQ=255) tATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTtgtg < 1:412475/93‑1 (MQ=255) ttCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGtga < 1:1250286/92‑1 (MQ=255) ttCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGtga < 2:3404783/92‑1 (MQ=255) tCGGCCGGCAGCGTATCGGTGCCAATCACCGCAAGGGCGCTTTTGGCGTTG‑CCGTTGCGGTCAGTGCGCAGGTTATGCCTCTCAATTTGtgat < 2:3552227/93‑1 (MQ=255) tCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGTGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTGATGCCACTCAATTTGtgat > 2:1143509/1‑93 (MQ=255) tCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGtgat > 2:2258013/1‑93 (MQ=255) ccgccAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGaaa > 1:1439725/1‑93 (MQ=255) gccAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGaaaaa > 2:2199511/1‑93 (MQ=255) gccAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGaaaaa < 2:2341919/93‑1 (MQ=255) ccAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAg < 1:3719575/93‑1 (MQ=255) ccAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAg > 2:2022599/1‑93 (MQ=255) ccAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAg > 2:3195269/1‑93 (MQ=255) cAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGt > 2:1042421/1‑93 (MQ=255) aGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTa > 2:3337905/1‑93 (MQ=255) gCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTAt > 1:4725692/1‑93 (MQ=255) gCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTAt > 1:2931977/1‑93 (MQ=255) gCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTAt < 2:339736/93‑1 (MQ=255) cGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTAtt < 2:4358940/93‑1 (MQ=255) cGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTAtt < 1:4462712/93‑1 (MQ=255) gTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTa > 1:4599835/1‑93 (MQ=255) tATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTac > 2:2483362/1‑93 (MQ=255) tATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTac > 2:4470545/1‑93 (MQ=255) aTCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATGTGTGATGAAAAAGTATTaca < 2:163707/93‑1 (MQ=255) tCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTacac > 2:1662332/1‑93 (MQ=255) tCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTacac < 1:2309898/93‑1 (MQ=255) tCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTacac > 2:1099132/1‑93 (MQ=255) tCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTacac > 2:4102611/1‑93 (MQ=255) ggTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAg < 1:3692645/93‑1 (MQ=255) gTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGc < 1:1664045/93‑1 (MQ=255) tGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCg > 1:3984569/1‑93 (MQ=255) tGCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCg < 2:4119908/93‑1 (MQ=255) tGCCAATCAGCGCAAGGGCGCTCTGGCCGTTGCCC‑TTGCTGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCg < 1:2476746/93‑1 (MQ=255) gCCAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGt > 2:3047268/1‑93 (MQ=255) cAATCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTTAATTTGTGATGAAAAAGTATTACACAGCGttt > 1:3384265/1‑93 (MQ=255) aaTCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTc < 1:1812492/93‑1 (MQ=255) aaTCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTc < 1:3127931/93‑1 (MQ=255) aaTCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTc > 2:3174987/1‑93 (MQ=255) aaTCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTc < 1:3158845/93‑1 (MQ=255) aTCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCa > 2:2895589/1‑93 (MQ=255) aTCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCa > 1:2573475/1‑93 (MQ=255) aTCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCa < 1:2222017/93‑1 (MQ=255) tCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCaa < 2:1790407/93‑1 (MQ=255) tCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCaa > 2:3360981/1‑93 (MQ=255) tCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCaa > 1:638469/1‑93 (MQ=255) tCAGCGCAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCaa > 2:1378669/1‑93 (MQ=255) cAGCGCAAGGGTGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAAc > 1:3205850/1‑93 (MQ=255) gcgcAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGt > 1:806017/1‑93 (MQ=255) cgcAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTg < 2:553232/93‑1 (MQ=255) cgcAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTg < 1:2705984/93‑1 (MQ=255) cAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGc > 1:4331725/1‑93 (MQ=255) cAAGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGc < 1:1738902/93‑1 (MQ=255) aaGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCt < 1:1638931/93‑1 (MQ=255) aaGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCt > 2:2396135/1‑93 (MQ=255) aaGGGCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCt < 2:3733524/93‑1 (MQ=255) ggCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCTTGc > 2:1513678/1‑93 (MQ=255) ggCGCTTTTGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCTTGc > 1:2221384/1‑93 (MQ=255) ttttGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCTTGCCGGAc < 2:4037248/93‑1 (MQ=255) tttGGCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCTTGCCGGAcg < 1:170158/93‑1 (MQ=255) gCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCTTGCCGGACGCGCa < 1:2918187/93‑1 (MQ=255) gCGTTGCCC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCTTGCCGGACGCGCa < 1:353522/93‑1 (MQ=255) | GCTTCCTGTTCGTCGGCCCCGGAAATCAGTAACTGGCAGTTATCGCCCGCCAGCGTATCGGTGCCAATCAGCGCAAGGGCGCTTTTGGCGTTG‑CC‑TTGCGGTCAGTGCGCAGGTTATGCCACTCAATTTGTGATGAAAAAGTATTACACAGCGTTTCAACGTGGCTTGCCGGACGCGCAT > NC_000913/4139575‑4139754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |