| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,448,543 | +C | intergenic (+48/‑90) | ytfQ → / → ytfR | putative LACI‑type transcriptional regulator/YtfR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,448,542 | 1 | . | C | 99.2% | 343.3 / ‑3.8 | 120 | intergenic (+47/‑91) | ytfQ/ytfR | putative LACI‑type transcriptional regulator/YtfR |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base C (64/55); total (64/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.56e-01 | |||||||||||
Only 100 of 127 total aligned reads displayed.
AAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCG‑G‑CGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG > NC_000913/4448461‑4448623 | aagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCgg > 2:1356555/1‑93 (MQ=37) gaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCg > 2:2989429/1‑93 (MQ=37) gaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCg > 1:4074328/1‑93 (MQ=37) aaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGa > 1:2896154/1‑93 (MQ=37) aaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGa < 2:1856431/93‑1 (MQ=37) aTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGAt > 2:3571215/1‑93 (MQ=37) ttAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATg > 1:528330/1‑93 (MQ=37) ttAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATg < 2:2180137/93‑1 (MQ=37) ttAGAGAAGAAGAAAAATATGGGGAATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATg > 2:3267301/1‑93 (MQ=25) tAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATgg < 1:2705302/93‑1 (MQ=37) tAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATgg < 1:2453252/93‑1 (MQ=37) agcgaagtagaaAACTATGGGGAATTGAAGGGTGCTATGCCTGATGCCGATTAGTAGGCCGGATAAGGCGCTCGCG‑CCCAGTCCGGCGATggg > 2:3758891/4‑92 (MQ=19) agagAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGt > 2:2838956/1‑93 (MQ=37) agagAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGt > 2:3758892/1‑93 (MQ=37) agagAAGAAGAAAAATATGGGGCATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGt > 1:2025859/1‑93 (MQ=25) gagaAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTg > 1:4369816/1‑93 (MQ=37) gagaAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTg > 1:3037463/1‑93 (MQ=37) aagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCAc > 1:2555288/1‑93 (MQ=37) agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACt < 1:3966012/93‑1 (MQ=37) agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACt > 2:2132841/1‑93 (MQ=37) agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACt < 1:277201/93‑1 (MQ=37) gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTg > 2:741458/1‑93 (MQ=37) aagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGa < 1:1438459/93‑1 (MQ=37) agaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGaa > 1:3242038/1‑93 (MQ=37) agaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGaa > 1:3242036/1‑93 (MQ=37) gaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAg < 2:2472126/93‑1 (MQ=37) aaaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGc > 1:260879/1‑93 (MQ=37) aaaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGc < 1:547422/93‑1 (MQ=37) aaaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGc > 1:508425/1‑93 (MQ=37) aaaaTATGGGGTATGGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGcc < 2:2292361/93‑1 (MQ=25) aaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCt < 2:425608/93‑1 (MQ=37) aaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTg > 1:3833138/1‑93 (MQ=37) atatGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGACAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGa > 1:3772709/1‑93 (MQ=37) tatGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGAt > 1:4170326/1‑93 (MQ=37) tatGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGAt < 2:786810/93‑1 (MQ=37) tatGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGAt > 1:215105/1‑93 (MQ=25) atGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATg > 1:1105365/1‑93 (MQ=25) atGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATg < 2:1995073/93‑1 (MQ=37) gggTATTGAGTTTTGCTATTCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGa < 1:2257442/93‑1 (MQ=21) gggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGa < 1:2037490/93‑1 (MQ=25) tATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGc > 2:4309385/1‑93 (MQ=25) aTTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCt > 1:3986171/1‑93 (MQ=25) aTTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCt > 1:939264/1‑93 (MQ=25) ttGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCtt < 1:567366/93‑1 (MQ=25) aGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAcc > 1:892464/1‑93 (MQ=25) gggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcg > 2:2621671/1‑93 (MQ=25) ttGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGt < 2:4309331/93‑1 (MQ=25) ttGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGt > 1:3709662/1‑93 (MQ=25) ttGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGt > 1:3709663/1‑93 (MQ=25) tGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTc < 1:2450460/93‑1 (MQ=25) tGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTc > 1:2980682/1‑93 (MQ=25) tcTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCTCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt < 1:1906558/92‑1 (MQ=25) gCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt < 1:1561812/93‑1 (MQ=25) cTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCtt < 2:1944178/93‑1 (MQ=25) cTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCtt < 1:3204192/93‑1 (MQ=25) tATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTa > 1:5490/1‑93 (MQ=21) tATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTa > 1:253266/1‑93 (MQ=25) tATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTa > 1:4649264/1‑93 (MQ=21) tGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATc < 2:240992/93‑1 (MQ=25) tGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATc > 1:172199/1‑93 (MQ=21) gCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa > 2:1189977/1‑93 (MQ=21) gCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa > 2:2236947/1‑93 (MQ=21) gCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa > 2:4581493/1‑93 (MQ=21) ccTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCAt < 1:2083303/93‑1 (MQ=21) ccTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCAt < 2:283195/93‑1 (MQ=21) cTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATg > 1:1585595/1‑93 (MQ=21) cTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATg > 1:2862924/1‑93 (MQ=21) cTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATg > 2:2912015/1‑93 (MQ=21) tGATGCCGATTCGTAGGCGGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGc < 2:1015942/93‑1 (MQ=21) tGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGc < 1:1773001/93‑1 (MQ=21) gATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGcc < 2:3782634/93‑1 (MQ=21) aTGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCt < 2:468634/93‑1 (MQ=21) aTGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCt < 2:1259964/93‑1 (MQ=21) aTGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCt > 2:3543074/1‑93 (MQ=21) tGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTa < 1:4431106/93‑1 (MQ=21) gCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTAc > 1:3403010/1‑93 (MQ=21) aTTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTggg < 1:130751/93‑1 (MQ=21) aTTCGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTggg > 2:1688134/1‑93 (MQ=21) cGTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGc < 2:4004477/93‑1 (MQ=21) gTAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCa > 1:4335397/1‑93 (MQ=21) tAGGCGGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAc < 2:3555035/93‑1 (MQ=21) tAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAc < 1:3996655/93‑1 (MQ=21) tAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAc < 2:1644583/93‑1 (MQ=21) tAGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAc < 1:4079938/93‑1 (MQ=21) aGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACg > 2:780588/1‑93 (MQ=21) aGGCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGGGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGTGAGCACg > 1:946165/1‑93 (MQ=18) ggCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGc < 1:4531120/93‑1 (MQ=21) gCCGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCt < 2:3733495/93‑1 (MQ=21) cGGATAGGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCttt < 2:1559/93‑1 (MQ=21) cGGATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCttt > 1:4247790/1‑93 (MQ=21) cGGATAAGGCCCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCttt < 2:3615565/93‑1 (MQ=21) ggATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTa < 2:1172559/93‑1 (MQ=25) ggATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTa < 1:126720/93‑1 (MQ=21) gATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTac > 2:1717578/1‑93 (MQ=25) gATAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTac > 2:4042624/1‑93 (MQ=21) aTAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTaca > 1:3571987/1‑93 (MQ=25) tAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTacac < 2:1619910/93‑1 (MQ=25) tAAGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTacac > 1:1299632/1‑93 (MQ=25) aaGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACAcc < 2:323595/93‑1 (MQ=25) aGGCGCTCGCGCCGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCg < 2:3124569/93‑1 (MQ=25) | AAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCG‑G‑CGCA‑TCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG > NC_000913/4448461‑4448623 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |