BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,594,797	(C)_6→7	coding (1314/3978 nt)	ydeK ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,594,791	1	.	C	95.3%	330.0 / 8.4	107	coding (1320/3978 nt)	ydeK	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (2/3); new base C (69/33); total (71/36)
Fisher's exact test for biased strand distribution p-value = 3.32e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 117 total aligned reads displayed.

CGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TT‑‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAGCCCCTGATTA  >  NC_000913/1594701‑1594878

cGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCACTGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TT‑‑cc                                                                                       >  1:1101031/1‑93 (MQ=255)

cGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TT‑‑cc                                                                                       <  1:3484533/93‑1 (MQ=255)

    aCGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TT‑‑cccccc                                                                                   <  1:405965/93‑1 (MQ=255)

     cGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TT‑‑ccccccc                                                                                  <  1:131605/93‑2 (MQ=255)

     cGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TT‑‑ccccccc                                                                                  <  1:2782246/93‑2 (MQ=255)

      gAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TT‑‑cccccccg                                                                                 >  2:420861/1‑91 (MQ=255)

       aaCTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TT‑‑cccccccgt                                                                                >  2:2409316/1‑90 (MQ=255)

       aaCTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TT‑‑cccccccgt                                                                                <  2:4660217/93‑4 (MQ=255)

        aCTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TT‑‑cccccccgtg                                                                               >  2:4560891/1‑89 (MQ=255)

          ttACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCgtggt                                                                              >  1:3793823/1‑93 (MQ=255)

           tACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACTAATGGTGGTACAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCgtggtg                                                                             >  1:4546826/1‑93 (MQ=255)

           tACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTAGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCgtggtg                                                                             >  2:4095259/1‑93 (MQ=255)

            tccGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGa                                                                            <  1:3658976/92‑1 (MQ=255)

             ccGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGAt                                                                           >  1:2251899/1‑93 (MQ=255)

               gCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGc                                                                         >  2:3977346/1‑93 (MQ=255)

               gCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGc                                                                         >  2:3977345/1‑93 (MQ=255)

               gCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGc                                                                         >  2:2538895/1‑93 (MQ=255)

               gCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGc                                                                         <  1:1106184/93‑1 (MQ=255)

               gCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGc                                                                         >  2:1039160/1‑93 (MQ=255)

               gCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGc                                                                         >  1:3835740/1‑93 (MQ=255)

               gCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGc                                                                         >  1:3384680/1‑93 (MQ=255)

               gCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGc                                                                         >  1:245552/1‑93 (MQ=255)

               cccATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TC‑‑CCCCCCGTGGTGATGCt                                                                        <  1:534990/92‑1 (MQ=255)

                 cATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTg                                                                       >  1:3738877/1‑93 (MQ=255)

                   tCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TT‑‑CCCCCCGTGGTGATGCTGACa                                                                    >  1:3135204/1‑93 (MQ=255)

                    cGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACa                                                                    <  2:2652326/93‑1 (MQ=255)

                     gCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACAt                                                                   <  1:4249415/93‑1 (MQ=255)

                     gCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACAt                                                                   >  1:1713222/1‑93 (MQ=255)

                       tAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTc                                                                 >  1:2556760/1‑93 (MQ=255)

                       tAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTc                                                                 <  1:1457095/93‑1 (MQ=255)

                        aaTATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTcc                                                                >  1:445088/1‑93 (MQ=255)

                        aaTATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTcc                                                                <  1:4005977/93‑1 (MQ=255)

                        aaTATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTcc                                                                <  1:2826552/93‑1 (MQ=255)

                         atatTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTTACCTCTCAC‑ATTT‑‑CCCCCCGTGGTGATGCTGACATTccc                                                               >  2:4218750/1‑93 (MQ=255)

                         atatTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTccc                                                               <  2:689587/93‑1 (MQ=255)

                         atatTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTccc                                                               >  2:2517192/1‑93 (MQ=255)

                         atatTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTccc                                                               >  2:2723786/1‑93 (MQ=255)

                         atatTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTccc                                                               >  2:2939075/1‑93 (MQ=255)

                          tatTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCg                                                              <  1:1841339/93‑1 (MQ=255)

                          tatTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCg                                                              <  1:675285/93‑1 (MQ=255)

                            ttGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGAc                                                            <  2:2236506/93‑1 (MQ=255)

                            ttGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGAc                                                            <  1:1875194/93‑1 (MQ=255)

                             tGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACg                                                           <  2:2010878/93‑1 (MQ=255)

                                ggTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCg                                                        <  2:3109295/93‑1 (MQ=255)

                                ggTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TT‑‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCgg                                                       <  1:3996049/93‑1 (MQ=255)

                                 gTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCgg                                                       >  2:3556316/1‑93 (MQ=255)

                                      cGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTtct                                                  >  2:2492878/1‑93 (MQ=255)

                                       gACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTCCCCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTtct                                                  <  1:4704221/93‑1 (MQ=255)

                                       gACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTtctc                                                 >  1:2193898/1‑93 (MQ=255)

                                          gCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCAt                                              >  2:565259/1‑93 (MQ=255)

                                          gCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCAt                                              >  2:3419137/1‑93 (MQ=255)

                                           cccGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATa                                             >  2:1850826/1‑93 (MQ=255)

                                            ccGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATaa                                            >  2:3051221/1‑93 (MQ=255)

                                            ccGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATaa                                            >  2:1729076/1‑93 (MQ=255)

                                             cGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAAc                                           >  1:4582063/1‑93 (MQ=255)

                                             cGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAAc                                           >  1:875643/1‑93 (MQ=255)

                                               cAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCg                                         >  1:618343/1‑93 (MQ=255)

                                                aaCACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGa                                        >  1:58105/1‑93 (MQ=255)

                                                 acacCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAg                                       >  2:3932105/1‑93 (MQ=255)

                                                 acacCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAg                                       >  2:594756/1‑93 (MQ=255)

                                                 acacCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAg                                       >  1:4625797/1‑93 (MQ=255)

                                                    ccAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGa                                    >  1:3299044/1‑93 (MQ=255)

                                                    ccAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGa                                    >  1:3299043/1‑93 (MQ=255)

                                                    ccAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGa                                    >  1:1284020/1‑93 (MQ=255)

                                                     cAATGGTGTTATAGACATTCTTAGTGTCCTCCCAC‑C‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGaa                                   <  1:65896/93‑1 (MQ=255)

                                                     cAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGaa                                   <  2:2391866/93‑1 (MQ=255)

                                                      aaTGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAAc                                  >  2:1298304/1‑93 (MQ=255)

                                                            ggtATAGACATTCTTATTGCCCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTtcctc                            <  2:1822105/93‑1 (MQ=255)

                                                            ggtATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTtcctc                            >  2:3851231/1‑93 (MQ=255)

                                                            ggtATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTtcctc                            >  2:764187/1‑93 (MQ=255)

                                                            ggtATAGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTtcctc                            >  2:1912261/1‑93 (MQ=255)

                                                              tataGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCg                          >  2:3501021/1‑93 (MQ=255)

                                                               ataGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGt                         <  1:1331908/93‑1 (MQ=255)

                                                               ataGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGt                         >  2:4215610/1‑93 (MQ=255)

                                                                taGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGtt                        >  1:3170796/1‑93 (MQ=255)

                                                                 aGACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTg                       >  2:2810636/1‑93 (MQ=255)

                                                                  gACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGc                      >  2:3201559/1‑93 (MQ=255)

                                                                  gACATTCTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGc                      >  2:3714787/1‑93 (MQ=255)

                                                                        cTTATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGacaa                >  1:306008/1‑93 (MQ=255)

                                                                         ttATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGacaac               <  1:2914461/93‑1 (MQ=255)

                                                                         ttATTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGacaac               >  2:3565595/1‑93 (MQ=255)

                                                                           tttGACCCCCCACAA‑CC‑‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCAAAAACCGAGTGACCTTCCTCCGTTGCTGAcaacaa             <  2:3931070/92‑1 (MQ=255)

                                                                           aTTGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGAcaacaa             <  2:3930913/93‑1 (MQ=255)

                                                                            ttGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAg            >  2:4035371/1‑93 (MQ=255)

                                                                             tGACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAGc           <  2:3069867/93‑1 (MQ=255)

                                                                              gACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAGcc          >  2:1175502/1‑93 (MQ=255)

                                                                              gACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAGcc          <  2:3041384/93‑1 (MQ=255)

                                                                              gACCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAGcc          >  1:3221090/1‑93 (MQ=255)

                                                                               aCCTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAGccc         >  1:3365198/1‑93 (MQ=255)

                                                                                ccTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAGcccc        >  1:2639183/1‑93 (MQ=255)

                                                                                ccTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAGcccc        <  2:2709960/93‑1 (MQ=255)

                                                                                 cTCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAGCCCCt       <  1:768685/93‑1 (MQ=255)

                                                                                  tCCCAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAGCCCCTg      >  1:3232887/1‑93 (MQ=255)

                                                                                   cccAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAGCCCCTGa     >  2:3061908/1‑93 (MQ=255)

                                                                                   cccAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAGCCCCTGa     >  2:2768317/1‑93 (MQ=255)

                                                                                   cccAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAGCCCCTGa     <  2:3677816/93‑1 (MQ=255)

                                                                                    ccAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAGCCCCTGAt    >  1:943680/1‑93 (MQ=255)

                                                                                    ccAC‑A‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAGCCCCTGAt    >  1:2416644/1‑93 (MQ=255)

                                                                                     cac‑a‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGGTTCTCCATAACCGAATGAACTTCCTCCGTTGCTGACAACAAGCCCCTGCtt   >  2:1710747/1‑93 (MQ=255)

                                                                                      ac‑a‑TTC‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAGCCCCTGATTa  >  1:1398673/1‑93 (MQ=255)

CGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCAC‑A‑TT‑‑CCCCCCGTGGTGATGCTGACATTCCCGACGCCGGTTTCTCCATAACCGAGTGAACTTCCTCCGTTGCTGACAACAAGCCCCTGATTA  >  NC_000913/1594701‑1594878

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`