| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,980,940 | +C | coding (1/363 nt) coding (627/627 nt) |
araH ← araH ← |
ABC‑type arabinose transport system permease component ABC‑type arabinose transport system permease component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,980,939 | 1 | . | C | 99.3% | 449.7 / ‑3.9 | 142 | coding (2/363 nt) | araH | ABC‑type arabinose transport system permease component |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base C (71/70); total (71/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.30e-01 | |||||||||||
Only 100 of 158 total aligned reads displayed.
AGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑G‑C‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGT > NC_000913/1980849‑1981026 | aGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑G‑cc > 2:2944022/1‑92 (MQ=255) aatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTc < 2:1001401/93‑1 (MQ=255) aatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTc > 2:1902971/1‑93 (MQ=255) atTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCg > 1:9/1‑93 (MQ=255) atTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCg > 1:3631755/1‑93 (MQ=255) atTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCACCAGACGCGCG‑GCC‑TCTTCg > 1:10/1‑93 (MQ=255) ttCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGt > 2:3516755/1‑93 (MQ=255) ccGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTc < 2:4555385/93‑1 (MQ=255) cGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTcc > 2:3596912/1‑93 (MQ=255) cGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTcc > 1:1584759/1‑93 (MQ=255) cGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTcc < 1:2430056/93‑1 (MQ=255) gccTATCGCTGATACAAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACATCCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTccc < 2:2244300/91‑1 (MQ=255) cTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTAGACCCGCCAGAGGCGCG‑GCC‑TCTGCGTGCCCGc > 2:3638342/1‑93 (MQ=255) tCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCaa > 1:3105833/1‑93 (MQ=255) gCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATc < 1:1965630/93‑1 (MQ=255) gCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑CCTTCGTTCCCGCCAATc > 2:1868967/1‑93 (MQ=255) cTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCg > 1:1842609/1‑93 (MQ=255) tGAAACCAGCCATGAGAGAACAAAGATAAGAATTTTGGTGCGAACAACCGGAACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGc < 2:56179/93‑1 (MQ=255) gATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGcc > 1:227625/1‑93 (MQ=255) gATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGcc < 1:3045863/93‑1 (MQ=255) aTACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCa < 2:504672/93‑1 (MQ=255) tACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAg < 1:2693746/93‑1 (MQ=255) aCCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAgg < 2:1823437/93‑1 (MQ=255) ccAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAggg < 2:262373/93‑1 (MQ=255) cAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAgggc > 1:120803/1‑92 (MQ=255) cAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGgt < 2:2520770/93‑1 (MQ=255) aGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCTCCAGGgtg > 2:1710323/1‑93 (MQ=255) aGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGgtg < 1:4291636/93‑1 (MQ=255) aGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGgtg < 1:2815597/93‑1 (MQ=255) ggCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGgtgt > 1:3569267/1‑93 (MQ=255) ggCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGgtgt < 2:3229968/93‑1 (MQ=255) ggCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGgtgt > 1:1805322/1‑93 (MQ=255) ggCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGgtgt < 2:817548/93‑1 (MQ=255) gCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGtt < 1:1910767/93‑1 (MQ=255) ccTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTa < 1:2590759/93‑1 (MQ=255) ccTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTa < 2:4748408/93‑1 (MQ=255) ccTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTa > 2:4674892/1‑93 (MQ=255) cTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTAc > 1:4151167/1‑93 (MQ=255) gagagaACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGa < 1:3343637/93‑1 (MQ=255) gagaAAAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGAcc < 2:11795/93‑1 (MQ=255) agaACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCa > 1:1012693/1‑93 (MQ=255) agaACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCa > 1:1384650/1‑93 (MQ=255) gaACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCaa < 1:3742657/93‑1 (MQ=255) gaACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCaa > 1:2131407/1‑93 (MQ=255) aaCAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCaaa > 2:617650/1‑93 (MQ=255) aCAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAg < 1:3580351/93‑1 (MQ=255) aaaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggt < 1:4686099/93‑1 (MQ=255) aaaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggt < 2:208052/93‑1 (MQ=255) aaaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggg > 1:4464705/1‑92 (MQ=255) aaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtg > 1:2881069/1‑93 (MQ=255) aGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtgg < 1:4637003/93‑1 (MQ=255) gATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtggt > 1:364987/1‑93 (MQ=255) gATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtggt > 2:2139437/1‑93 (MQ=255) gATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggaggt > 2:4031165/1‑93 (MQ=255) aataataATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtggt < 1:341316/92‑1 (MQ=255) aataagaATTTTGTGGCGAACAACCTGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtggt < 1:3210758/92‑1 (MQ=255) ataataATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGtt < 1:390848/93‑1 (MQ=255) taataaTTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGttt < 2:612037/93‑1 (MQ=255) aataatTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGgttt > 1:1262938/1‑93 (MQ=255) ataatTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTa < 1:1419936/93‑1 (MQ=255) ataatTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTa < 2:3311744/93‑1 (MQ=255) taatTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTAt < 1:1361188/93‑1 (MQ=255) atTTTGGGCCGAACACCCGGTACACCCGCCAGACGCGCG‑C‑CTTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTc < 1:4020003/93‑1 (MQ=255) ttttGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTca < 1:2586319/93‑1 (MQ=255) ttttGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTca > 1:3262317/1‑93 (MQ=255) tGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagca < 2:1999036/93‑1 (MQ=255) aacaacCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAAcc > 2:4459186/1‑93 (MQ=255) acaacCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCa > 1:2041511/1‑93 (MQ=255) aacCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCaaa > 2:1459039/1‑93 (MQ=255) acCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAg > 2:4138794/1‑93 (MQ=255) ccGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGa > 2:4084352/1‑93 (MQ=255) cGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGAt > 1:1592274/1‑93 (MQ=255) ggTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATa < 1:612477/93‑1 (MQ=255) ggTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATa < 2:248238/93‑1 (MQ=255) ggTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGCTTTATTCAGCAGCAAACCAAAGATa > 2:2757725/1‑93 (MQ=255) gTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAACCCAAAGATaa < 2:2498181/93‑1 (MQ=255) gTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATaa > 1:2156733/1‑93 (MQ=255) tACCCCCGCCAGCCGCGCGAC‑C‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAAt < 2:4480296/93‑1 (MQ=255) acacCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGTTTTTATTCAGCAGCAAACCAAAGATAATc < 1:4141269/93‑1 (MQ=255) cacCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCa > 2:4531464/1‑93 (MQ=255) cacCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCa > 1:748284/1‑93 (MQ=255) ccccGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAg < 1:2386458/92‑1 (MQ=255) cccGCCAGACGCGCGCC‑C‑TCTTCGTTCCCGCAAAACGCCAGGGTGTCACGACCAAAGGTGGTTTTATTCAGCAGCAATCTAAAGATAATCAGa < 2:3635529/93‑1 (MQ=255) cccGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGa > 2:1301839/1‑93 (MQ=255) cccGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGa < 1:555940/93‑1 (MQ=255) ccGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGac < 2:3074489/93‑1 (MQ=255) ccGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGac < 2:3816237/93‑1 (MQ=255) cGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGaca > 2:4362532/1‑93 (MQ=255) cGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGaca > 1:1811702/1‑93 (MQ=255) cGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGaca < 1:3619900/93‑1 (MQ=255) gCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGacac < 2:3744173/93‑1 (MQ=255) cccAGACGCGCG‑GCC‑TCTTCGTCCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGacac < 1:3693486/92‑1 (MQ=255) cAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACAcgc < 1:1659327/93‑1 (MQ=255) gACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGa > 2:4277992/1‑93 (MQ=255) gACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGa < 1:3987762/93‑1 (MQ=255) gACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGa < 1:4457160/93‑1 (MQ=255) aCGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGAc < 2:864664/93‑1 (MQ=255) gcgcg‑GCC‑TCTTCGTGCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACgg < 2:2352535/93‑1 (MQ=255) cgcg‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGt < 2:3986039/93‑1 (MQ=255) cgcg‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGt < 2:3571834/93‑1 (MQ=255) | AGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑G‑C‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGT > NC_000913/1980849‑1981026 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |