| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,537,405 | +GC | intergenic (+61/‑394) | b3407 → / → feoA | hypothetical protein/ferrous iron transport protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,537,404 | 1 | . | C | 100.0% | 615.0 / NA | 192 | intergenic (+60/‑395) | b3407/feoA | hypothetical protein/ferrous iron transport protein A |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (118/74); total (118/74) | |||||||||||
| * | NC_000913 | 3,537,404 | 2 | . | G | 99.5% | 617.0 / ‑5.2 | 192 | intergenic (+60/‑395) | b3407/feoA | hypothetical protein/ferrous iron transport protein A |
| Reads supporting (aligned to +/- strand): ref base . (0/0); major base G (117/74); minor base T (1/0); total (118/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 205 total aligned reads displayed.
GCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCA‑‑C‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATA > NC_000913/3537312‑3537487 || gcgcTGGCGGCGGCAATGGGCAAAAACCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCa < 1:275055/93‑1 (MQ=255) cgcTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCA‑‑c < 2:1620019/93‑1 (MQ=255) cTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCA‑‑cgc < 2:1508499/93‑3 (MQ=255) tGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCA‑‑cgcc > 1:2836255/1‑90 (MQ=255) ggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAAGCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTg < 1:814032/93‑1 (MQ=38) gcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTgg > 2:4533501/1‑93 (MQ=38) cAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTATGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGc > 1:3256006/1‑93 (MQ=37) cAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGc > 2:485078/1‑93 (MQ=37) cAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGc < 2:2102796/93‑1 (MQ=37) aaTGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCa > 1:3621792/1‑93 (MQ=37) aTGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCaa > 2:3823528/1‑93 (MQ=37) tGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCaac < 2:2033673/93‑1 (MQ=38) gCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCaacgaa < 1:432949/93‑1 (MQ=38) cAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCaacgaac > 1:2816214/1‑93 (MQ=37) aaaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCaacgaacg > 1:728355/1‑93 (MQ=37) aaaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCaacgaacg > 2:3594029/1‑93 (MQ=37) aaaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCaacgaacg < 1:2641814/93‑1 (MQ=37) aaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGc < 1:1837367/93‑1 (MQ=37) aaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGc < 1:3181852/93‑1 (MQ=37) aaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCt > 1:969731/1‑93 (MQ=37) aaaCGTGAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCt < 1:2036669/93‑1 (MQ=37) accGTTAAACGCCCGTATTGGCCTACGTTTGGAATTTGCACAAAACCGTAGGGCAGATAAGGCGTCCACGC‑‑CGCATCTGGCAACGAACGCCtt < 2:1745127/91‑1 (MQ=21) aaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCtt < 1:176704/93‑1 (MQ=37) aaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCtt > 2:2048869/1‑93 (MQ=37) aCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTg > 2:66866/1‑93 (MQ=37) aCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTg < 2:721798/93‑1 (MQ=37) aCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTg > 1:4042069/1‑93 (MQ=37) aCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTg > 1:3570934/1‑93 (MQ=37) cGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGc < 1:3800511/93‑1 (MQ=37) tAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTg > 2:1326670/1‑93 (MQ=37) tAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTg > 2:1940313/1‑93 (MQ=38) aaCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGAc < 1:894293/93‑1 (MQ=37) acccccGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTGCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACa < 2:3616818/90‑1 (MQ=37) aCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACa > 2:2211154/1‑93 (MQ=37) aCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAAAGCCTTGCCCGaaa > 2:14065/1‑91 (MQ=25) cGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACAt < 1:271224/93‑1 (MQ=37) cGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACAt > 1:1688435/1‑93 (MQ=38) gCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATa > 1:200351/1‑93 (MQ=38) ccccGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATa < 2:4259790/92‑1 (MQ=37) ccGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATaaa < 1:4405524/93‑1 (MQ=37) cGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATaaaa > 1:2105470/1‑93 (MQ=38) cGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATaaaa < 2:1175278/93‑1 (MQ=37) cGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATaaaa < 1:1949404/93‑1 (MQ=37) cGTACGGGCATCCGGTTCGAATTTGCACGAAATGGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATaaaa < 2:1351123/93‑1 (MQ=25) gTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAg > 2:2962591/1‑93 (MQ=38) gTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAg > 2:3220841/1‑93 (MQ=38) tACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGt > 1:2239009/1‑93 (MQ=37) tACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGt < 2:3133242/93‑1 (MQ=37) aCTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTg > 2:4503574/1‑93 (MQ=38) aCTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTg < 1:4348377/93‑1 (MQ=37) aCTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTg > 2:3971548/1‑93 (MQ=37) tGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGcc > 1:4527218/1‑93 (MQ=38) gCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCgg > 2:2874228/1‑93 (MQ=38) ccTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCggg > 2:1003014/1‑92 (MQ=37) tACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGgaga > 2:2319984/1‑93 (MQ=38) tACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGgaga > 2:588433/1‑93 (MQ=38) tACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGgaga > 1:2350991/1‑93 (MQ=38) aCGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGaa > 2:648745/1‑93 (MQ=38) aCGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGaa < 1:1228752/93‑1 (MQ=37) cGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAat > 2:1614782/1‑93 (MQ=38) ggTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAata < 1:1467268/93‑1 (MQ=37) gTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAatat > 1:2619962/1‑93 (MQ=38) gTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAatat > 1:2534508/1‑93 (MQ=38) gTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAatat < 2:4309117/93‑1 (MQ=37) gTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAatat > 2:2240690/1‑93 (MQ=38) gTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAatat < 1:2093027/93‑1 (MQ=37) gAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTTGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTcc < 1:68055/93‑1 (MQ=37) gAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGGGAATATCTcc > 1:215802/1‑93 (MQ=37) gAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTcc > 2:3085291/1‑93 (MQ=37) aaTTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGACGGAGAATATCTCCg > 1:68080/1‑93 (MQ=37) aTTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCgg > 2:4545163/1‑93 (MQ=38) tttGCACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGc > 1:1178409/1‑93 (MQ=38) gCACGAAATCGTAGGGCAGAGAAGGCGTTCA‑‑CGGCGCATCTGGCAACGACCTCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGTAtt < 2:1677887/93‑1 (MQ=255) cACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAttt < 1:4647581/93‑1 (MQ=38) cACGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAttt > 2:385177/1‑93 (MQ=38) aCGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAtttt < 2:4617142/93‑1 (MQ=38) aCGAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAtttt > 1:4438533/1‑93 (MQ=38) gAAATCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTa < 2:846267/93‑1 (MQ=38) aaaTCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTAt < 2:798027/93‑1 (MQ=38) aTCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGGGAGTATTTCCGGCAGTTTTAttt > 2:1799177/1‑92 (MQ=25) aTCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTc > 2:2417101/1‑93 (MQ=38) aTCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTc < 1:2307799/93‑1 (MQ=38) tCGTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCCTTTTTATTcc > 2:283638/1‑93 (MQ=37) gTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcac > 1:3072790/1‑93 (MQ=38) gTAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcac > 2:4722882/1‑93 (MQ=38) tAGGGCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcaca > 2:3401879/1‑93 (MQ=38) gggCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGc < 1:1650669/93‑1 (MQ=38) gggCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGc > 1:159032/1‑93 (MQ=38) gggCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGc > 2:840891/1‑93 (MQ=38) gggCAGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGc > 2:1554270/1‑93 (MQ=38) aGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGGATTTTTTTTCCACAGCCaaa > 2:2568513/1‑93 (MQ=38) aGATAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCaaa > 1:3104053/1‑93 (MQ=38) aaTAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAAc < 1:2495954/92‑1 (MQ=38) tAAGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGCGAATATCTCCGGCATTTTTATTCCACAGCCAAACTc > 1:3716302/1‑93 (MQ=38) ataGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTc < 2:3259442/91‑1 (MQ=38) aaGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCa < 1:2431806/93‑1 (MQ=39) aGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCat < 1:333291/93‑1 (MQ=39) aGGCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCat > 1:3960820/1‑93 (MQ=255) ggCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCata > 2:2684515/1‑93 (MQ=255) ggCGTTCACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCata > 2:2089310/1‑93 (MQ=255) || GCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCA‑‑C‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATA > NC_000913/3537312‑3537487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |