BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 279335	NA (NA)	203 (1.120)	118/184	0.1	98.5%	coding (252/339 nt)	b4505	hypothetical protein
*	?	NC_000913	370982 =	3 (0.020)	203 (1.120)	118/184	0.1	98.5%	coding (535/882 nt)	mhpC	2‑hydroxy‑6‑ketonona‑2,4‑dienedioic acid hydrolase

Only 100 of 161 total aligned reads displayed.

AGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGTTCTTT  >  NC_000913/279246‑279427

 gCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTAcagcag                                                                                          >  2:541883/1‑93 (MQ=33)

 gCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTAcagcag                                                                                          <  2:134372/93‑1 (MQ=33)

 gCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTAcagcag                                                                                          <  2:769481/93‑1 (MQ=33)

  cTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACagcagc                                                                                         <  1:560385/93‑1 (MQ=33)

  cTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACagcagc                                                                                         >  1:235331/1‑93 (MQ=33)

   tAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCt                                                                                        >  2:183884/1‑93 (MQ=34)

   tAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCt                                                                                        <  1:1525204/93‑1 (MQ=34)

   tAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCt                                                                                        >  2:2073721/1‑93 (MQ=34)

    aaaCAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCtt                                                                                       <  1:3417482/93‑1 (MQ=37)

    aaaCAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCtt                                                                                       <  1:1357330/93‑1 (MQ=37)

      acaacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCtttt                                                                                     >  1:3788976/1‑93 (MQ=37)

      acaacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGAAGCtttt                                                                                     >  1:348876/1‑93 (MQ=18)

       caacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCttttt                                                                                    >  2:1623916/1‑93 (MQ=37)

       caacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCttttt                                                                                    >  1:2942478/1‑93 (MQ=37)

        aacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCtttttt                                                                                   <  1:1628097/93‑1 (MQ=39)

        aacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCtttttt                                                                                   >  1:619337/1‑93 (MQ=37)

        aacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCtttttt                                                                                   <  2:2139755/93‑1 (MQ=39)

         acaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCttttttt                                                                                  <  2:1063027/93‑1 (MQ=38)

          caGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTa                                                                                 <  2:4353846/93‑1 (MQ=39)

           aGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTaa                                                                                >  2:3513340/1‑93 (MQ=40)

            gACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAat                                                                               <  1:3076801/93‑1 (MQ=255)

             aCCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAata                                                                              <  2:4228944/93‑1 (MQ=255)

             aCCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAata                                                                              <  2:2113760/93‑1 (MQ=255)

             aCCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAata                                                                              <  1:2947971/93‑1 (MQ=255)

               cGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATg                                                                            <  2:3918343/93‑1 (MQ=255)

                gagaAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGt                                                                           >  1:1312709/1‑93 (MQ=255)

                 agaAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTc                                                                          <  2:3737912/93‑1 (MQ=255)

                  gaAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTcc                                                                         <  2:3864467/93‑1 (MQ=255)

                   aaaGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTccc                                                                        >  2:4663169/1‑93 (MQ=255)

                     aGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGt                                                                      <  1:1732999/93‑1 (MQ=255)

                     aGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGt                                                                      <  2:3043745/93‑1 (MQ=255)

                       acacTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtc                                                                    <  1:1536954/93‑1 (MQ=255)

                       acacTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGGGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtc                                                                    >  1:3212149/1‑93 (MQ=255)

                        cacTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcg                                                                   >  1:1109138/1‑93 (MQ=255)

                        cacTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcg                                                                   >  2:2771386/1‑93 (MQ=255)

                        cacTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcg                                                                   <  2:1815497/93‑1 (MQ=255)

                         acTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcgt                                                                  <  2:4745762/93‑1 (MQ=255)

                          cTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcgtc                                                                 >  2:1418933/1‑93 (MQ=255)

                          cTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcgtc                                                                 <  1:3480367/93‑1 (MQ=255)

                               gTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTaa                                                            <  2:3641996/93‑1 (MQ=255)

                                ttCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAc                                                           <  1:4652974/93‑1 (MQ=255)

                                 tCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAcc                                                          >  2:3147918/1‑93 (MQ=255)

                                 tCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAcc                                                          <  2:66313/93‑1 (MQ=255)

                                 tCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAcc                                                          <  2:1906870/93‑1 (MQ=255)

                                 tCAAAACACCGAAAGAGATAAGTGAAAGGGGTTTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAcc                                                          <  2:1906867/93‑1 (MQ=255)

                                  cAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAccc                                                         <  1:493671/93‑1 (MQ=255)

                                  cAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAccc                                                         <  2:4060528/93‑1 (MQ=255)

                                   aaaaCACCGAGAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCg                                                        <  1:4684917/93‑1 (MQ=255)

                                   aaaaCACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCg                                                        >  2:2032071/1‑93 (MQ=255)

                                     aaCACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGtt                                                      <  1:3261144/93‑1 (MQ=255)

                                     aaCACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGtt                                                      >  2:3257049/1‑93 (MQ=255)

                                           gAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGct                                                >  2:1350378/1‑93 (MQ=255)

                                            aaaGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGctc                                               <  2:1041008/93‑1 (MQ=255)

                                            aaaGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGctc                                               <  1:286252/93‑1 (MQ=255)

                                              agagATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCtt                                             <  1:448753/93‑1 (MQ=255)

                                               gagaTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCttt                                            <  2:2669087/93‑1 (MQ=255)

                                               gagaTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCttt                                            <  1:3038949/93‑1 (MQ=255)

                                                agaTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTc                                           <  2:3672901/93‑1 (MQ=255)

                                                agaTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTc                                           <  2:2503433/93‑1 (MQ=255)

                                                  aTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTg                                         <  2:3097522/93‑1 (MQ=255)

                                                     aTTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGgag                                      >  2:4367654/1‑93 (MQ=255)

                                                       tGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGAc                                    <  1:4711934/93‑1 (MQ=255)

                                                        gAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGAcg                                   <  1:3266441/93‑1 (MQ=255)

                                                        gAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGAcg                                   >  2:4443862/1‑93 (MQ=255)

                                                          aaGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGAcggc                                 >  1:713995/1‑93 (MQ=255)

                                                            ggggTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGAcggcgg                               >  1:234343/1‑93 (MQ=255)

                                                                tgtTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGAtct                           <  2:1837464/93‑1 (MQ=255)

                                                                 tttGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGAtctc                          <  1:1447168/92‑1 (MQ=255)

                                                                 gtTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGAtctc                          >  2:1141495/1‑93 (MQ=255)

                                                                 gtTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGAtctc                          >  1:3594661/1‑93 (MQ=255)

                                                                 gtTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGAtctc                          <  1:2205234/93‑1 (MQ=255)

                                                                     cATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGcc                      <  1:909463/93‑1 (MQ=255)

                                                                     cATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGcc                      >  1:3547362/1‑93 (MQ=255)

                                                                     cATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGcc                      >  1:3547363/1‑93 (MQ=255)

                                                                      aTTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCt                     >  2:961074/1‑93 (MQ=255)

                                                                      aTTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCt                     >  1:2962977/1‑93 (MQ=255)

                                                                       ttGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTg                    >  2:1296826/1‑93 (MQ=255)

                                                                       ttGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTg                    >  1:4046789/1‑93 (MQ=255)

                                                                       ttGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTg                    >  2:1336277/1‑93 (MQ=255)

                                                                       ttGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCGGGAGACGGCGGATCTCGGCCTg                    <  1:3895913/93‑1 (MQ=255)

                                                                       ttGACAAATTGAATCTACAGCTGCTTTTTTTAATGTTTCCCGTTCGTCGGGAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTg                    <  2:859343/93‑1 (MQ=255)

                                                                        tGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGa                   <  2:4594746/93‑1 (MQ=255)

                                                                         gACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAg                  <  1:1453465/93‑1 (MQ=255)

                                                                           cAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCa                <  1:3191694/93‑1 (MQ=255)

                                                                           cAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCa                <  1:1708003/93‑1 (MQ=255)

                                                                            aGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGCGACGGCGGATCTCGGCCTGAGCAt               >  1:4022393/1‑93 (MQ=255)

                                                                            aGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCAt               >  1:860357/1‑93 (MQ=255)

                                                                              aTTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCt             >  2:4164372/1‑93 (MQ=255)

                                                                               ttGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTg            <  1:2231390/93‑1 (MQ=255)

                                                                                tGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGa           <  2:2483688/93‑1 (MQ=255)

                                                                                  aaTCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACt         <  2:197980/93‑1 (MQ=255)

                                                                                   aTCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCGTCTgccgg        >  2:298448/1‑89 (MQ=255)

                                                                                   aTCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTg        >  2:2471/1‑93 (MQ=255)

                                                                                    tCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGt       >  2:1088414/1‑93 (MQ=255)

                                                                                    tCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGt       >  2:3982960/1‑93 (MQ=255)

                                                                                    tCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGt       >  1:4354475/1‑93 (MQ=255)

                                                                                       aCAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGTTCt    <  2:3883331/93‑1 (MQ=255)

                                                                                       aCAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGTTCt    <  1:1175311/93‑1 (MQ=255)

                                                                                        cagcagCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGTTCtt   <  1:1795360/93‑1 (MQ=255)

                                                                                         agcagcTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGTTCttt  >  1:1261883/1‑93 (MQ=255)

AGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGTTCTTT  >  NC_000913/279246‑279427

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.