New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 3349258 = | 15 (0.080) | 201 (1.110) | 110/184 | 0.1 | 93.1% | coding (1403/2331 nt) | arcB | aerobic respiration sensor‑response protein |
? | NC_000913 | = 3349263 | NA (NA) | coding (1398/2331 nt) | arcB | aerobic respiration sensor‑response protein |
Only 100 of 219 total aligned reads displayed.
ACGTAAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAG > NC_000913/3349166‑3349350 | aggttgaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgc < 2:2958601‑M1/1‑1 (MQ=255) aggttgaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgc < 1:427549‑M1/1‑1 (MQ=255) aggttgaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgc < 1:2029813‑M1/1‑1 (MQ=255) ggttgaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgcc < 1:683980‑M1/2‑1 (MQ=255) gttgaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgccg < 1:1921559‑M1/3‑1 (MQ=255) gTAAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCg < 1:932036/93‑1 (MQ=255) tAAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCgg > 2:2698247/1‑93 (MQ=255) tAAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCgg < 2:1477101/93‑1 (MQ=255) tgaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgccggt > 2:3951106‑M1/89‑93 (MQ=255) gaacctttcccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgccggtg > 1:878735‑M1/88‑93 (MQ=255) aaGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTg > 2:3333150/1‑93 (MQ=255) cctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCa > 1:3810562‑M1/85‑93 (MQ=255) ctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAg < 1:2060247‑M1/10‑1 (MQ=255) tttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAgg < 2:3859237‑M1/11‑1 (MQ=255) ttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGt > 1:27074‑M1/82‑93 (MQ=255) tgccctgttcgctggtaaccgtaatctcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGtt > 2:4438113‑M1/81‑93 (MQ=255) ctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAcc > 2:719314‑M1/77‑93 (MQ=255) ctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAcc < 1:3652528‑M1/17‑1 (MQ=255) ctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAcc < 2:2757867‑M1/17‑1 (MQ=255) ctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAcc > 2:4122646‑M1/77‑93 (MQ=255) ctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAcc < 1:1171421‑M1/17‑1 (MQ=255) gttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGc < 1:317426‑M1/19‑1 (MQ=255) gttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGCGGCAGGCttactgc < 2:3091570‑M1/19‑4 (MQ=255) cgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCAt < 1:1538841‑M1/22‑1 (MQ=255) gctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATg < 2:3596350‑M1/23‑1 (MQ=255) gctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATg < 1:2895051‑M1/23‑1 (MQ=255) ctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGa > 1:4125024‑M1/70‑93 (MQ=255) tggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGAc < 2:3279836‑M1/25‑1 (MQ=255) ggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACt < 2:4520464‑M1/26‑1 (MQ=255) accgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCt < 1:654594‑M1/30‑1 (MQ=255) accgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCt > 1:2109411‑M1/64‑93 (MQ=255) ccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCtt < 2:2012661‑M1/31‑1 (MQ=255) ccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCtt < 2:4400593‑M1/31‑1 (MQ=255) ccgtaatatcgccgcccatatttttcgccagacgacgagaaacgaccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCtt > 1:4205687‑M1/63‑93 (MQ=255) cgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCttt > 2:2244337‑M1/62‑93 (MQ=255) gtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTc < 2:3967588‑M1/33‑1 (MQ=255) taatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCa > 1:1856466‑M1/60‑93 (MQ=255) aatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTGTTTCAc < 2:1755532‑M1/35‑1 (MQ=255) atatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCAcc < 1:3524271‑M1/36‑1 (MQ=255) atatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCAcc < 1:4495214‑M1/36‑1 (MQ=255) tatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCt > 1:947845‑M1/57‑93 (MQ=255) tatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCt > 2:289114‑M1/57‑93 (MQ=255) atcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTg > 2:2502127‑M1/56‑93 (MQ=255) tcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTgg < 2:1856737‑M1/39‑1 (MQ=255) tcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTgg > 2:555025‑M1/55‑93 (MQ=255) cgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGt < 2:2204679‑M1/40‑1 (MQ=255) gccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTa < 2:2658967‑M1/41‑1 (MQ=255) ccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTaa > 2:2588232‑M1/52‑93 (MQ=255) ccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTaa < 2:1913848‑M1/42‑1 (MQ=255) ccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACCGTCTTTCACCTGGTaa < 1:4224336‑M1/42‑1 (MQ=255) cgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGCTTACCGCCATGACTGTCTTTCACCTGGTAAt < 1:3235068‑M1/43‑1 (MQ=255) gcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATa < 1:1015628‑M1/44‑1 (MQ=255) gcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATa < 1:497031‑M1/44‑1 (MQ=255) cccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATAc > 1:3422235‑M1/49‑93 (MQ=255) cccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATAc > 2:1740323‑M1/49‑93 (MQ=255) ccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACa > 1:3954541‑M1/48‑93 (MQ=255) catatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAt > 2:3205516‑M1/47‑93 (MQ=255) atatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATCCATg < 1:3157066‑M1/48‑1 (MQ=255) atatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATg > 1:163982‑M1/46‑93 (MQ=255) atatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATCACTGTCTTTCACCTGGTAATACATg < 1:2231771‑M1/48‑1 (MQ=255) atatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCAATGACTGTCTTTCACCTGGTAATACATg > 1:3631851‑M1/46‑93 (MQ=255) tatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATgg < 2:167624‑M1/49‑1 (MQ=255) tcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGaaaa > 1:2405653‑M1/39‑93 (MQ=255) cgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAt < 1:1313543‑M1/56‑1 (MQ=255) cgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAt < 2:229067‑M1/56‑1 (MQ=255) cagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAtttt < 2:521309‑M1/59‑1 (MQ=255) agacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTa < 2:4462231‑M1/60‑1 (MQ=255) gacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTAt > 1:1052917‑M1/33‑93 (MQ=255) gacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTAt > 1:4744203‑M1/33‑93 (MQ=255) acgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACACGGCGAAAATTTTATc > 1:1538792‑M1/32‑93 (MQ=255) cgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATcc > 2:3799242‑M1/31‑93 (MQ=255) cgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATcc > 1:274649‑M1/31‑93 (MQ=255) cgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATcc > 1:2689192‑M1/31‑93 (MQ=255) gacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCa > 1:2284247‑M1/30‑93 (MQ=255) gacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCa > 1:2014143‑M1/30‑93 (MQ=255) acgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAg < 1:2142799‑M1/65‑1 (MQ=255) acgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAg > 2:1115765‑M1/29‑93 (MQ=255) acgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAg > 1:647203‑M1/29‑93 (MQ=255) acgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTAATACATGGCGAAAATTTTATCCAg < 1:756993‑M1/65‑1 (MQ=255) gagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCt < 2:4229623‑M1/67‑1 (MQ=255) gagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCt < 1:166900‑M1/67‑1 (MQ=255) gaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCa > 2:4646047‑M1/25‑93 (MQ=255) aacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATc > 1:1766024‑M1/23‑93 (MQ=255) acggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATcc < 1:4608278‑M1/72‑1 (MQ=255) cggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCt > 2:4234778‑M1/21‑93 (MQ=255) gccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGc > 2:884175‑M1/19‑93 (MQ=255) agaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGa < 2:2415732‑M1/78‑1 (MQ=255) gacgaatcccggtgCCGCTGGCGGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGaa > 2:3672709‑M1/15‑93 (MQ=255) gaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGaa < 2:4103664‑M1/79‑1 (MQ=255) gacaaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGaa > 2:128034‑M1/15‑93 (MQ=255) aataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGcc < 1:2609663‑M1/83‑1 (MQ=255) aataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGcc < 1:1214007‑M1/83‑1 (MQ=255) ataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCg < 1:2296470‑M1/84‑1 (MQ=255) accggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGAt > 1:3355775‑M1/8‑93 (MQ=255) ccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATa < 1:2194580‑M1/87‑1 (MQ=255) gtgCCGGTGTCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCa > 2:2097734‑M1/4‑93 (MQ=255) gtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCa > 1:1067009‑M1/4‑93 (MQ=255) ccGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCagag < 2:4287099/93‑1 (MQ=255) ccGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCagag < 2:1620077/93‑1 (MQ=255) ccGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCagag > 2:628193/1‑93 (MQ=255) | ACGTAAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAG > NC_000913/3349166‑3349350 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |