| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,474,849 | 20 bp→GTATTTCCCGGCATCTTTATAGCGATAGCA | intergenic (+24/+2) | yjgL → / ← argI | hypothetical protein/ornithine carbamoyltransferase 1 |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4474849 | 4474868 | 20 | 193 [0] | [0] 215 | yjgL/argI | hypothetical protein/ornithine carbamoyltransferase 1 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4474848 | 0 (0.000) | 131 (1.080) +GTATTTCCCGGCATCTTTATAGCGATAGCA |
75/124 | 0.1 | 100% | intergenic (+23/+22) | yjgL/argI | hypothetical protein/ornithine carbamoyltransferase 1 |
| ? | NC_000913 | 4474869 = | 0 (0.000) | intergenic (+44/+1) | yjgL/argI | hypothetical protein/ornithine carbamoyltransferase 1 | |||||
Only 100 of 215 total aligned reads displayed.
TATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAATAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGA > NC_000913/4474777‑4474961 | aacactttgggtggaagaatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaa < 1:1733351‑M2/1‑1 (MQ=255)aacactttgggtggaagaatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaa < 2:2089422‑M2/1‑1 (MQ=255) actttgggtggaagaatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaatta < 2:3114116‑M2/4‑1 (MQ=255) gggtggaagaatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTAc < 1:197838‑M2/9‑1 (MQ=255) ggtggaagaatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACt > 1:3140169‑M2/84‑93 (MQ=255) gaagaatagacctatcactgcataaaataatgtgatgccgggatggtttggatttcccggcatctttatagcgatagcaATTATTTACTGagt > 1:3195543‑M2/80‑92 (MQ=255) aagaatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTgagtg > 2:1884684‑M2/79‑91 (MQ=255) aagaatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTgagtg < 2:3767591‑M2/15‑3 (MQ=255) agaatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAgtgt > 1:3517189‑M2/78‑93 (MQ=255) agaatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAgtgt > 2:1445179‑M2/78‑93 (MQ=255) gaatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTc > 1:1378857‑M2/77‑93 (MQ=255) atagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTcgc < 2:54153‑M2/19‑1 (MQ=255) agacctatcactgcataaaataatgtgatgccgggattgtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGa < 1:1621536‑M2/21‑1 (MQ=255) gacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGAc < 1:4290575‑M2/22‑1 (MQ=255) gacctatcacagcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGAc < 1:175000‑M2/22‑1 (MQ=255) cctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCa < 1:3239409‑M2/24‑1 (MQ=255) cctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCa > 1:1140704‑M2/70‑93 (MQ=255) ctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCAt < 2:3321878‑M2/25‑1 (MQ=255) tatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATc > 1:1900283‑M2/68‑93 (MQ=255) atcactgcataaaataatgtgatgccgggatggtttgtatttctcggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCa > 1:3453603‑M2/67‑93 (MQ=255) tcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCAc > 1:1175883‑M2/66‑93 (MQ=255) cactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCAcc > 1:1011401‑M2/65‑93 (MQ=255) actgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCg > 2:408556‑M2/64‑93 (MQ=255) actgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCg > 2:3277186‑M2/64‑93 (MQ=255) ctgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGc < 1:755513‑M2/31‑1 (MQ=255) tgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCt > 1:1119332‑M2/62‑93 (MQ=255) tgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCt > 1:885960‑M2/62‑93 (MQ=255) tgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCt < 1:2395478‑M2/32‑1 (MQ=255) cataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCttt < 2:4583639‑M2/34‑1 (MQ=255) cataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCttt > 1:4747234‑M2/60‑93 (MQ=255) taaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGa < 1:2318563‑M2/36‑1 (MQ=255) taaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGa < 1:2669800‑M2/36‑1 (MQ=255) aaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGAt > 1:2048780‑M2/57‑93 (MQ=255) aaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATa < 2:3220596‑M2/38‑1 (MQ=255) aataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAg < 1:3637671‑M2/39‑1 (MQ=255) ataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGt < 2:4539194‑M2/40‑1 (MQ=255) taatgtgatgccgggctagtttgtctttcccggcatctttatagcgatagcaATTATTTACTGCGTGTCGCGACCATCACCGCTTTGCTAGTa < 1:4220928‑M2/41‑1 (MQ=255) taatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTa < 2:3614466‑M2/41‑1 (MQ=255) taatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTa > 2:671875‑M2/53‑93 (MQ=255) aatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTAt < 1:350233‑M2/42‑1 (MQ=255) atgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATg < 2:1471859‑M2/43‑1 (MQ=255) gtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCa < 2:3510473‑M2/45‑1 (MQ=255) tgatgccgagatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCAt < 2:4222991‑M2/46‑1 (MQ=255) gatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATgcaca > 1:1231192‑M2/47‑91 (MQ=255) gatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATa > 2:4298564‑M2/47‑93 (MQ=255) atgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATAc < 2:1339054‑M2/48‑1 (MQ=255) tgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACg > 2:1463159‑M2/45‑93 (MQ=255) gccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACgg < 2:3644368‑M2/50‑1 (MQ=255) gggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGttt < 1:687769‑M2/53‑1 (MQ=255) gggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGttt < 2:1676367‑M2/53‑1 (MQ=255) ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGtttt > 1:4324531‑M2/40‑93 (MQ=255) ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGtttt > 2:1258277‑M2/40‑93 (MQ=255) gatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTc < 2:2323806‑M2/55‑1 (MQ=255) gatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTc < 1:1581100‑M2/55‑1 (MQ=255) atggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTcc > 2:3981383‑M2/38‑93 (MQ=255) ggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGc > 2:853090‑M2/36‑93 (MQ=255) gtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCgct > 1:3399625‑M2/35‑92 (MQ=255) gtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGcc < 2:2233467‑M2/59‑1 (MQ=255) gtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGcc < 1:3593278‑M2/59‑1 (MQ=255) gtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGcc < 2:150695‑M2/59‑1 (MQ=255) tttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCt < 2:2456083‑M2/60‑1 (MQ=255) tttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCt < 2:2136436‑M2/60‑1 (MQ=255) tgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGa < 2:3395561‑M2/62‑1 (MQ=255) tgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGa > 2:1120055‑M2/32‑93 (MQ=255) tgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGa < 2:4681936‑M2/62‑1 (MQ=255) tattgcccggcatctttatagcgatagcaATTATTTACTGAGAGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATc < 1:2971240‑M2/64‑1 (MQ=255) cggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACa < 1:2784593‑M2/71‑1 (MQ=255) ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACaa < 1:3879048‑M2/72‑1 (MQ=255) catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATg < 2:2492377‑M2/74‑1 (MQ=255) catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATg > 2:1729953‑M2/20‑93 (MQ=255) catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATg > 1:3097021‑M2/20‑93 (MQ=255) atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGc > 2:866818‑M2/19‑93 (MQ=255) atctttatagcgatagcaATTATTTACTGAGAGTCGCAACCATCACCGCCTTGATAGTATGCATACGGTTTTTCGCCTGATCAAAAACAATGc > 1:976059‑M2/19‑93 (MQ=255) tctttatagcgatagcaATTATTTACTGAGGGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt < 1:4627587‑M2/76‑1 (MQ=255) tctttatagcgatagcaATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt < 1:4021067‑M2/76‑1 (MQ=255) ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTg < 1:4511908‑M2/77‑1 (MQ=255) tttatatcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTgg < 1:1484821‑M2/78‑1 (MQ=255) tttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTgg < 1:1322041‑M2/78‑1 (MQ=255) ttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTggc < 2:1581841‑M2/79‑1 (MQ=255) ttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTggc < 2:45365‑M2/79‑1 (MQ=255) tatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTggcg < 2:1022312‑M2/80‑1 (MQ=255) atagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTCATCAAAAACAATGCTggcgg > 1:4728294‑M2/13‑93 (MQ=255) tagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTggcggc > 1:1692221‑M2/12‑93 (MQ=255) tagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTggcggc > 1:398293‑M2/12‑93 (MQ=255) agcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCa < 2:3769176‑M2/83‑1 (MQ=255) gcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAg > 2:214424‑M2/10‑93 (MQ=255) cgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGa < 2:2768931‑M2/85‑1 (MQ=255) gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAt < 2:1788296‑M2/86‑1 (MQ=255) gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAt < 1:4060142‑M2/86‑1 (MQ=255) gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAt < 1:4392684‑M2/86‑1 (MQ=255) atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAtt > 1:2277448‑M2/7‑93 (MQ=255) atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAtt < 2:591170‑M2/87‑1 (MQ=255) atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAtt < 2:2924690‑M2/87‑1 (MQ=255) atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAtt < 2:2536720‑M2/87‑1 (MQ=255) atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAtt > 1:1060185‑M2/7‑93 (MQ=255) tagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTc < 1:3324337‑M2/88‑1 (MQ=255) tagcaATGATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTc < 2:1644915‑M2/88‑1 (MQ=255) gcaATTATTTACTGAGCGTCGCGACCTTCACCGCTTTGATAGTATGCATACGGTTTTCAGCCTGATCAAAAACAATGCTGGCGGCAGATTCGa > 1:382217‑M2/4‑93 (MQ=255) attattTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGa < 2:1345921/93‑1 (MQ=255) attattTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGa < 1:3796183/93‑1 (MQ=255) | TATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAATAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGA > NC_000913/4474777‑4474961 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |