Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,976,527 Δ776 bp insB5insA5 insB5, insA5

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1976527–1977294 1977302 9–776 233 [0] [0] 238 insB5–insA5 insB5,insA5

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 19765260 (0.000)212 (1.280) 112/168 0.0 100% intergenic (‑305/+16) b1892/insB5 FlhD/IS1 protein InsB
?NC_000913 1977303 = 0 (0.000)intergenic (‑64/‑474) insA5/yecG IS1 protein InsA/putative regulator

Only 100 of 233 total aligned reads displayed.

GTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCG  >  NC_000913/1976435‑1976618
                                                                                           |                                                                                            
gTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGt                                                                                             >  1:920732‑M1/1‑92 (MQ=255)
gTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATAACACAAAACACTCAATTACTTAACATAAATGt                                                                                             >  1:4680758‑M1/1‑92 (MQ=255)
    cTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataa                                                                                         <  1:782352‑M1/93‑6 (MQ=255)
     tACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataat                                                                                        >  1:3912206‑M1/1‑87 (MQ=255)
     tACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataag                                                                                        >  2:4654879‑M1/1‑87 (MQ=255)
     tACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataag                                                                                        >  1:3409823‑M1/1‑87 (MQ=255)
      acacGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagt                                                                                       <  2:1790486‑M1/93‑8 (MQ=255)
      acacGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagt                                                                                       >  2:203684‑M1/1‑86 (MQ=255)
        acGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtca                                                                                     <  1:4404830‑M1/93‑10 (MQ=255)
         cGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcat                                                                                    >  2:4250470‑M1/1‑83 (MQ=255)
          gCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcata                                                                                   >  1:4265453‑M1/1‑82 (MQ=255)
          gCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcata                                                                                   <  1:2334285‑M1/93‑12 (MQ=255)
           cacaTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatac                                                                                  <  2:769161‑M1/93‑13 (MQ=255)
            acaTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatact                                                                                 >  1:374308‑M1/1‑80 (MQ=255)
              aTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttt                                                                               <  1:3262756‑M1/93‑16 (MQ=255)
               tACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatactttt                                                                              <  1:133364‑M1/93‑17 (MQ=255)
               tACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACCTAACATAAATGtataagtcatactttt                                                                              <  2:346400‑M1/93‑17 (MQ=255)
                 cAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgt                                                                            >  2:2800263‑M1/1‑75 (MQ=255)
                   aCGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttt                                                                          <  2:2378975‑M1/93‑21 (MQ=255)
                    cGGAGGGGGGCTGCGATTTTCAATAATGCTTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgtttt                                                                         <  1:3229735‑M1/93‑22 (MQ=255)
                       aGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttggg                                                                      <  2:3728523‑M1/93‑25 (MQ=255)
                        ggggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggt                                                                     <  1:2542716‑M1/93‑26 (MQ=255)
                        ggggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggt                                                                     >  2:1372497‑M1/1‑68 (MQ=255)
                        ggggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggt                                                                     <  2:1782348‑M1/93‑26 (MQ=255)
                         gggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtg                                                                    >  1:1186216‑M1/1‑67 (MQ=255)
                         gggggATGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtg                                                                    <  2:3268258‑M1/93‑27 (MQ=255)
                           gggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgta                                                                  <  1:3002678‑M1/93‑29 (MQ=255)
                           gggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgta                                                                  >  2:2837385‑M1/1‑65 (MQ=255)
                             gCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatt                                                                >  2:1262160‑M1/1‑63 (MQ=255)
                              cTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtattt                                                               <  2:3083550‑M1/93‑32 (MQ=255)
                               tGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttc                                                              <  2:2287791‑M1/93‑33 (MQ=255)
                               tGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttc                                                              <  1:3299381‑M1/93‑33 (MQ=255)
                               tGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttc                                                              >  2:2716593‑M1/1‑61 (MQ=255)
                                gCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttca                                                             >  2:4704354‑M1/1‑60 (MQ=255)
                                 cGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaa                                                            >  1:148807‑M1/1‑59 (MQ=255)
                                  gATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaat                                                           <  1:435995‑M1/93‑36 (MQ=255)
                                  gATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaat                                                           <  2:4206553‑M1/93‑36 (MQ=255)
                                   aTTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatc                                                          <  2:1350328‑M1/93‑37 (MQ=255)
                                   aTTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatc                                                          <  1:1575857‑M1/93‑37 (MQ=255)
                                    ttttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatct                                                         <  1:4050659‑M1/93‑38 (MQ=255)
                                     tttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctg                                                        >  1:4125206‑M1/1‑55 (MQ=255)
                                     tttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctg                                                        <  2:3434778‑M1/93‑39 (MQ=255)
                                      ttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgt                                                       <  1:3009921‑M1/93‑40 (MQ=255)
                                      ttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgt                                                       <  2:1561909‑M1/93‑40 (MQ=255)
                                       tCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgtt                                                      >  2:860249‑M1/1‑53 (MQ=255)
                                       tCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgtt                                                      >  2:2493159‑M1/1‑53 (MQ=255)
                                        cAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgtta                                                     >  2:4362661‑M1/1‑52 (MQ=255)
                                        cAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgtta                                                     >  1:4582817‑M1/1‑52 (MQ=255)
                                        cAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgtta                                                     <  1:555552‑M1/93‑42 (MQ=255)
                                         aataatGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaa                                                    <  2:806100‑M1/93‑43 (MQ=255)
                                         aataatGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaa                                                    <  1:2229757‑M1/93‑43 (MQ=255)
                                           taatGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaa                                                  <  2:2161957‑M1/93‑45 (MQ=255)
                                            aatGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaa                                                 <  1:3381172‑M1/93‑46 (MQ=255)
                                            aatGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaa                                                 <  1:2896217‑M1/93‑46 (MQ=255)
                                             atGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaag                                                >  2:1299518‑M1/1‑47 (MQ=255)
                                             atGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaag                                                >  1:1849361‑M1/1‑47 (MQ=255)
                                              tGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagt                                               >  1:1764706‑M1/1‑46 (MQ=255)
                                              tGCGTGATGCAGATCACACAAAACACTCAATTACGTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagt                                               <  1:601866‑M1/93‑48 (MQ=255)
                                                  tGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttttt                                           <  1:3515449‑M1/93‑52 (MQ=255)
                                                   gATGCAGATCACACAAAACACATAAATTCTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttc                                          <  2:1331303‑M1/93‑53 (MQ=255)
                                                    aTGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcg                                         <  2:492222‑M1/93‑54 (MQ=255)
                                                       cAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgcta                                      <  2:3781637‑M1/93‑57 (MQ=255)
                                                       cAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgcta                                      <  2:2611495‑M1/93‑57 (MQ=255)
                                                        aGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctac                                     <  1:4514883‑M1/93‑58 (MQ=255)
                                                        aGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctac                                     >  1:2029420‑M1/1‑36 (MQ=255)
                                                        aGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctac                                     >  2:3786317‑M1/1‑36 (MQ=255)
                                                         gATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacg                                    >  1:662849‑M1/1‑35 (MQ=255)
                                                             acacaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctag                                >  2:1989825‑M1/1‑31 (MQ=255)
                                                             acacaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctag                                <  1:1933461‑M1/93‑63 (MQ=255)
                                                             acacaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttccctacgctag                                <  1:1996237‑M1/93‑63 (MQ=255)
                                                              cacaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagc                               >  2:2347624‑M1/1‑30 (MQ=255)
                                                                 aaaaCACTCAATTACTTAGCATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaag                            <  2:188107‑M1/93‑67 (MQ=255)
                                                                 aaaaCACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaag                            >  1:1247428‑M1/1‑27 (MQ=255)
                                                                    acacTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaa                         >  2:778897‑M1/1‑24 (MQ=255)
                                                                    acacTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaa                         <  1:3787385‑M1/93‑70 (MQ=255)
                                                                       cTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaa                      >  1:352864‑M1/1‑21 (MQ=255)
                                                                       cTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaa                      <  2:3035037‑M1/93‑73 (MQ=255)
                                                                       cTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaa                      <  2:4072159‑M1/93‑73 (MQ=255)
                                                                        tCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaat                     <  2:583187‑M1/93‑74 (MQ=255)
                                                                           aTTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaa                  <  2:1073876‑M1/93‑77 (MQ=255)
                                                                           aTTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaacaaaaaagaaa                  >  1:681743‑M1/1‑17 (MQ=255)
                                                                            ttACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaa                 >  2:3219269‑M1/1‑16 (MQ=255)
                                                                            ttACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaa                 <  2:1691561‑M1/93‑78 (MQ=255)
                                                                            ttACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaa                 <  1:3664832‑M1/93‑78 (MQ=255)
                                                                              aCTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaaca               >  2:1464168‑M1/1‑14 (MQ=255)
                                                                              aCTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaaca               <  2:4002438‑M1/93‑80 (MQ=255)
                                                                              aCTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaaca               <  1:1699604‑M1/93‑80 (MQ=255)
                                                                              aCTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaaca               >  2:4563558‑M1/1‑14 (MQ=255)
                                                                               cTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacag              >  2:3548849‑M1/1‑13 (MQ=255)
                                                                                ttAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgacacagg             >  2:3372172‑M1/1‑12 (MQ=255)
                                                                                 tAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacagga            <  1:1046304‑M1/93‑83 (MQ=255)
                                                                                   aCATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaat          <  2:326568‑M1/93‑85 (MQ=255)
                                                                                    cATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaata         <  2:3085289‑M1/93‑86 (MQ=255)
                                                                                      tAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataat       >  1:3595355‑M1/1‑6 (MQ=255)
                                                                                      tAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataat       <  1:3110602‑M1/93‑88 (MQ=255)
                                                                                      tAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataat       >  1:1018399‑M1/1‑6 (MQ=255)
                                                                                       aaaTGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatc      <  2:862774‑M1/93‑89 (MQ=255)
                                                                                           gtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaa  <  2:1143735‑M1/93‑93 (MQ=255)
                                                                                           gtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaa  <  1:709175‑M1/93‑93 (MQ=255)
                                                                                           gtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaa  <  1:370517‑M1/93‑93 (MQ=255)
                                                                                           |                                                                                            
GTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCG  >  NC_000913/1976435‑1976618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: