BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,949,472	0	G	T	62.4%	99.7 / inf	234	G18G (GGG→GGT)	yecE	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (61/27); new base T (95/51); total (156/78)
Fisher's exact test for biased strand distribution p-value = 5.68e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.90e-08
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 278 total aligned reads displayed.

CGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGCCCTGCCGAAACCCGAGGTTGTCCTGCG  >  NC_000913/1949380‑1949564

cGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTgggg                                                                                              <  1:179645/93‑1 (MQ=255)

  cccGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTAt                                                                                            <  1:4595201/93‑1 (MQ=255)

  cccGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTAt                                                                                            >  1:167915/1‑93 (MQ=255)

  cccGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGAt                                                                                            <  2:2095440/93‑1 (MQ=255)

   ctgtgtGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATc                                                                                           <  2:1655155/91‑1 (MQ=255)

   ccGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATc                                                                                           <  2:4267867/93‑1 (MQ=255)

   ccGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATc                                                                                           >  2:733936/1‑93 (MQ=255)

   ccGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATc                                                                                           <  1:415401/93‑1 (MQ=255)

   cagtgtGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAGCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATc                                                                                           <  1:2223784/91‑1 (MQ=255)

    cGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTTGCATCCTAAATGGGTGCGGTTGGGTATCa                                                                                          >  1:3236340/1‑93 (MQ=255)

    cGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCa                                                                                          <  2:257663/93‑1 (MQ=255)

    cGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCa                                                                                          >  1:2005171/1‑93 (MQ=255)

    cGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCa                                                                                          >  1:4261296/1‑93 (MQ=255)

     gtgtGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCAc                                                                                         >  1:3578759/1‑93 (MQ=255)

     gtgtGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCAc                                                                                         <  1:728124/93‑1 (MQ=255)

      tgtgCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCAcc                                                                                        <  1:7702/93‑1 (MQ=255)

      tgtgCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTAGCATCCTAAATGGGTGCGGTTGGGGATCAcc                                                                                        >  2:2629308/1‑93 (MQ=255)

       gtgCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCa                                                                                       <  1:1215263/93‑1 (MQ=255)

        tgCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAg                                                                                      >  1:3451768/1‑93 (MQ=255)

        tgCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAg                                                                                      >  2:564204/1‑93 (MQ=255)

        tgCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAg                                                                                      >  2:2839528/1‑93 (MQ=255)

         ggctAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGc                                                                                     <  1:1604768/90‑1 (MQ=255)

         gCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGc                                                                                     >  1:802403/1‑93 (MQ=255)

          cGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGcc                                                                                    <  2:3182478/93‑1 (MQ=255)

           gTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCTTAAATGGGTGCGGTTGGGTATCACCAGCCt                                                                                   <  1:2621346/93‑1 (MQ=255)

           gTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCt                                                                                   >  2:2230954/1‑93 (MQ=255)

           gTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCt                                                                                   <  1:3743716/93‑1 (MQ=255)

           gTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCt                                                                                   >  2:4072254/1‑93 (MQ=255)

            tAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCtt                                                                                  <  2:11136/93‑1 (MQ=255)

             aGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATTGTCGCATCCCAAATGGGTGCGGTTGGGTCTCACCAGCCTTg                                                                                 >  1:1508949/1‑93 (MQ=255)

             aGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTg                                                                                 >  1:3789043/1‑93 (MQ=255)

               cGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGaa                                                                               <  1:3151989/93‑1 (MQ=255)

               cGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGaa                                                                               <  1:855501/93‑1 (MQ=255)

                gTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAag                                                                              >  2:2506818/1‑93 (MQ=255)

                 tGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAaga                                                                             >  1:4408274/1‑93 (MQ=255)

                 tGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAaga                                                                             >  1:606784/1‑93 (MQ=255)

                  ggAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAagag                                                                            >  2:1782727/1‑93 (MQ=255)

                   gAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGt                                                                           <  2:1707882/93‑1 (MQ=255)

                   gAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGt                                                                           <  2:4416490/93‑1 (MQ=255)

                    aaGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTa                                                                          <  1:104004/93‑1 (MQ=255)

                    aaGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTa                                                                          >  2:1861821/1‑93 (MQ=255)

                    aaGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTa                                                                          <  1:3933652/93‑1 (MQ=255)

                    aaGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTa                                                                          <  2:4555872/93‑1 (MQ=255)

                     agagATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAt                                                                         >  1:1421462/1‑93 (MQ=255)

                     agagATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTAt                                                                         <  2:1898455/93‑1 (MQ=255)

                      gagaTCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATg                                                                        >  1:3602797/1‑93 (MQ=255)

                       agaTCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGc                                                                       >  2:100260/1‑93 (MQ=255)

                        gaTCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGcc                                                                      <  2:304581/93‑1 (MQ=255)

                        gaTCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGcc                                                                      <  2:369076/93‑1 (MQ=255)

                         aTCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGccc                                                                     >  2:2856586/1‑93 (MQ=255)

                         aTCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGccc                                                                     >  2:3847107/1‑93 (MQ=255)

                            cttcaCGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGcc                                                                  >  2:3102437/5‑93 (MQ=255)

                            cttcaCGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGcc                                                                  >  1:4083201/5‑93 (MQ=255)

                            cttcaCGCGTTATGATTGACATCGGTCTGCCGCAAGGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGcc                                                                  <  1:2263580/89‑1 (MQ=255)

                              tcaCGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCAc                                                                <  2:2786574/91‑1 (MQ=255)

                              tcaCGCGTTAGTATTTACATCGTTCTGCCGAAATGGCCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCAc                                                                <  2:909796/91‑1 (MQ=255)

                                ccgcgTTATGATTTACATCGGTCTGCCGAAATGGTCGCATCCTAAAGGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACtt                                                              <  1:4444473/92‑1 (MQ=255)

                                aCGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACtt                                                              >  2:461551/1‑93 (MQ=255)

                                aCGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACtt                                                              >  2:4657149/1‑93 (MQ=255)

                                 cgctTTATGATTTCAATCGGTCTACCGCAATGGTCGCATCCTAAAGGGGTGCGGTGGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACttt                                                             <  2:200885/93‑1 (MQ=255)

                                 cgcgTTATGATTTACATCGTTCTCCCGCAAGGTTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTGGAAGAGTATGCCCGCCACttt                                                             <  2:2381577/93‑1 (MQ=255)

                                  gcgTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTa                                                            >  2:4041089/1‑93 (MQ=255)

                                    gTTATGATTTACATGGGTCTGCCGCAGTGGTCGCATCCTAAATGGGTGGGGTGGGGTATCACCGGCCTTAAAGAGTATGCCCGCCACTTTAAc                                                          <  2:1201222/93‑1 (MQ=255)

                                    gTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAAc                                                          >  2:1430497/1‑93 (MQ=255)

                                    gTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAAc                                                          >  1:3333149/1‑93 (MQ=255)

                                    gTTATGATTTACATCGGTCTGCCGCAATGGACGCATCCTAAATGGGAGCGGTTGGGTATCACCAGCCTTGAAGAGTACTGCCGCCACTTTAAc                                                          >  2:603782/1‑93 (MQ=255)

                                    gTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAAc                                                          >  2:1963314/1‑93 (MQ=255)

                                     ttATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACt                                                         >  1:3961537/1‑93 (MQ=255)

                                      tATGTTTTACATCGGTCTGCCGCAATGGCCGCATCCTAAATGGGTGCGGTTGGGTACCCCCAGCCTTGAAGAGTATGCCCGCCACTTTAACTg                                                        <  1:1844504/93‑1 (MQ=255)

                                      tATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTg                                                        >  1:3123876/1‑93 (MQ=255)

                                      tATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTg                                                        >  2:2064658/1‑93 (MQ=255)

                                        tGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCg                                                      >  1:2957347/1‑93 (MQ=255)

                                         gATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGt                                                     >  2:3397759/1‑93 (MQ=255)

                                          aTTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTg                                                    >  2:4177590/1‑93 (MQ=255)

                                           tttACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGCATGCCCGCCACTTTAACTGCGTga                                                   >  2:1269517/1‑92 (MQ=255)

                                            ttACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTgac                                                  >  1:2805141/1‑91 (MQ=255)

                                             tACATCGGTCTGCCGCAAGGGTCGCATCGTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTgacg                                                 <  1:2490152/93‑4 (MQ=255)

                                              aCATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTgacgc                                                >  1:2456674/1‑89 (MQ=255)

                                              aCATCGGTCTGCCGCAATGGTCGCATCCAAATGGGGTGCGGTTGGGTATCACCAGCCTTAAAGATTATGCCCGCCACTTTAACTGCGTgacgc                                                <  2:1988847/93‑5 (MQ=255)

                                                    gTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAaca                                          >  1:2730706/1‑93 (MQ=255)

                                                    gTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAaca                                          >  2:3515500/1‑93 (MQ=255)

                                                    gTCTACCGCAATGGTCGCATCCTAAATGGGGGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAaca                                          >  2:4333973/1‑93 (MQ=255)

                                                         ccGCAATGGCCGCATCCTGAATGGGTGCGGTTGGGGATCACCATCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACg                                     >  2:126680/1‑93 (MQ=255)

                                                             aaTGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCttt                                 >  2:3130054/1‑93 (MQ=255)

                                                              aTGGTCGCATCCTAAGTGGGTGGGGTGGGGGATCACCAGCCTGGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTa                                <  2:3367723/93‑1 (MQ=255)

                                                              aTGGTCGCATCCTAAATGGGTGGGTTGGGGGATCCCCAGCCTTAAAGGTTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTa                                <  1:2851318/93‑1 (MQ=255)

                                                              aTGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTa                                >  2:3412591/1‑93 (MQ=255)

                                                                  tCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGcc                            >  1:1776085/1‑93 (MQ=255)

                                                                      aTCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGCCCTGc                        >  1:1919970/1‑93 (MQ=255)

                                                                      aTCCTAAAGGGGTGGGGTGGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGCCCTGc                        <  1:4639362/93‑1 (MQ=255)

                                                                      aTCCTAAAGGGGTGCGGTTGGGGATCACCAGCTTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGCCCTGc                        <  2:1533347/93‑1 (MQ=255)

                                                                       tCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGCCCTGcc                       >  1:49038/1‑93 (MQ=255)

                                                                        ccTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGCCCTGCCg                      >  2:2758385/1‑93 (MQ=255)

                                                                          tAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGCCCTGCCGaa                    >  2:2979012/1‑93 (MQ=255)

                                                                           aaaTGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGCCCTGCCGaaa                   >  1:3548150/1‑93 (MQ=255)

                                                                             aTGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGCCCTGCCGAAAcc                 >  1:534563/1‑93 (MQ=255)

                                                                                ggTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGCCCTGCCGAAACCCGa              >  1:2887125/1‑93 (MQ=255)

                                                                                   gCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGCCCTGCCGAAACCCGAGGt           <  2:2122152/93‑1 (MQ=255)

                                                                                     ggTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGCCCTGCCGAAACCCGAGGTTg         >  2:290244/1‑93 (MQ=255)

                                                                                         ggggACCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGCCCTGCCGAAACCCGAGGTTGTCCt     <  2:826798/93‑1 (MQ=255)

CGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGCCCTGCCGAAACCCGAGGTTGTCCTGCG  >  NC_000913/1949380‑1949564

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`