| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,941,090 | 0 | T | C | 64.5% | 48.9 / 109.4 | 110 | noncoding (34/76 nt) | gltU | tRNA‑Val |
| Reads supporting (aligned to +/- strand): ref base T (27/12); new base C (40/31); total (67/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.48e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 123 total aligned reads displayed.
ACACAGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCAT > NC_000913/3941000‑3941182 | acacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCctt > 2:3556107/1‑93 (MQ=18) cacaGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTc > 2:3218697/1‑93 (MQ=18) caGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAc < 1:2686063/93‑1 (MQ=18) caGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAc < 1:1974800/93‑1 (MQ=18) aGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAcg < 1:3570703/93‑1 (MQ=18) aGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAcg < 1:3660673/93‑1 (MQ=18) aGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAcg > 2:869939/1‑93 (MQ=21) gATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAcgg < 1:4140168/93‑1 (MQ=18) gATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAcgg > 1:1769058/1‑93 (MQ=21) gATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAcgg > 2:297777/1‑93 (MQ=21) aTTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAcggc > 1:681032/1‑93 (MQ=21) ttGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAcggcg > 2:817164/1‑93 (MQ=21) tGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAcggcgg < 2:1045729/93‑1 (MQ=18) tGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCAcggcgg > 2:3147037/1‑93 (MQ=18) gTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGt < 1:2984711/93‑1 (MQ=18) tCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTa > 2:3442396/1‑93 (MQ=21) tGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACAGCGCCCCTTCACGGCGGTTAc > 1:122951/1‑93 (MQ=255) tGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAAc > 2:2843963/1‑93 (MQ=21) tGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAAc > 1:2325608/1‑93 (MQ=21) tGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAAc > 1:2508266/1‑93 (MQ=21) tGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAAc > 1:724345/1‑93 (MQ=18) gagaGGAAGTGAAAAGCAAGGCCTCTTGCTAAGCAGACTGATCCGTCCCCTTCGTCTAGAGGCCCAGGGCCCCGCCCCTTCACGGCGGTAACa < 1:1732297/90‑1 (MQ=11) gATAGGATGTAAAAAGCAGGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGTCTCAGGACACCGCCCCTTCACGGGGGTAACa < 2:371093/93‑1 (MQ=11) gATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACa < 2:2352384/93‑1 (MQ=18) gATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACa > 1:1007306/1‑93 (MQ=18) gATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACa < 2:523113/93‑1 (MQ=18) gATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACa < 1:1564074/93‑1 (MQ=18) gATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACa < 2:879534/93‑1 (MQ=18) aTAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAg < 2:1072443/93‑1 (MQ=18) aTAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAg > 2:695355/1‑93 (MQ=18) aTAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAg < 2:1059123/93‑1 (MQ=18) tAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAgg < 1:3826624/93‑1 (MQ=18) aGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAggg > 2:1582356/1‑93 (MQ=18) ggAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGCCCCCGCCCCTTCACGGCGGTAACAgggg < 2:1025090/93‑1 (MQ=255) ggAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAgggg < 1:2091412/93‑1 (MQ=17) ggAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAgggg > 2:2030886/1‑93 (MQ=17) ggAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAgggg > 2:3014397/1‑93 (MQ=17) ggAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAgggg < 2:1685370/93‑1 (MQ=17) ggAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAgggg > 1:2961940/1‑93 (MQ=17) gAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAGGGGt > 2:4719107/1‑93 (MQ=14) gAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAGGGGt < 1:460024/93‑1 (MQ=14) gAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAGGGGt < 2:1738061/93‑1 (MQ=14) gAAGCGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCCTTCACGGCGGTAACAGGGGt > 2:217611/1‑93 (MQ=9) ggACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtc > 1:1477054/1‑93 (MQ=32) ggACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtc > 2:3202333/1‑93 (MQ=32) ggACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtc > 1:1552873/1‑93 (MQ=32) ggACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtc > 2:3325837/1‑93 (MQ=32) ggACACCGCCCTTTCACGGCGGTAACAGGGGCTCGAATTCCCTATGGGACGCCACTTGCTGGCTTGTGAGTGAAAGTCACCTGCCTTCATAtc > 2:2766077/1‑93 (MQ=11) ggACACCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtc > 2:3995599/1‑93 (MQ=17) ggACACCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtc > 1:2262633/1‑93 (MQ=17) ggACACCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtc > 1:2954097/1‑93 (MQ=17) acacCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATAtctc < 1:403421/93‑1 (MQ=21) cacCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCa < 1:1847891/93‑1 (MQ=35) cacCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCa > 1:3233881/1‑93 (MQ=25) acCGCCCTTTCACGGCTGCAACAGGGGTTCGAATCTCCTAGGGGGCGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaa > 2:3051730/1‑93 (MQ=11) acCGCCCTTTCACGGCGGTATCAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaa > 1:2142364/1‑93 (MQ=25) acCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaa < 2:3239631/93‑1 (MQ=25) acCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaa < 2:2055142/93‑1 (MQ=25) acCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaa > 2:2938198/1‑93 (MQ=25) acCGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaa > 1:2091893/1‑93 (MQ=25) ccGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaa < 1:2934617/93‑1 (MQ=35) ccGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaa < 2:1470713/93‑1 (MQ=25) ccGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaa > 1:3457852/1‑93 (MQ=25) ccGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaa > 2:3048153/1‑93 (MQ=25) cGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTCATATCTCaaac > 2:1719406/1‑92 (MQ=25) cGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaaa < 1:1923692/93‑1 (MQ=35) cGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaaa > 2:3533765/1‑93 (MQ=35) cGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaaa < 2:2684461/93‑1 (MQ=35) cGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaaa > 2:4039971/1‑93 (MQ=25) cGCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaaa > 1:3341987/1‑93 (MQ=25) cGCCCCTTCACGGCGGTAACAGGGGCTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCaaaa > 2:4469275/1‑93 (MQ=255) gCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGGCGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAAc > 1:1807263/1‑93 (MQ=25) gCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAAc > 2:2351504/1‑93 (MQ=35) gCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAAc > 1:1813756/1‑93 (MQ=35) gCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAAc > 1:3762559/1‑93 (MQ=35) gCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAAc > 2:4527666/1‑93 (MQ=35) gCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATGTGTCAAAAc > 2:1753716/1‑93 (MQ=255) gCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAAc < 2:2137011/93‑1 (MQ=25) gCCCCTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAAc > 1:711590/1‑93 (MQ=25) ccccTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTAACCTGCCTTAATATCTCAAAACt > 1:1589087/1‑93 (MQ=255) cccTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACt > 2:802917/1‑93 (MQ=35) cccTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACt > 1:1291464/1‑93 (MQ=35) cccTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACt > 2:3845486/1‑93 (MQ=35) cccTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACt > 1:332541/1‑93 (MQ=35) cccTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACt > 1:2423328/1‑93 (MQ=35) ccTTTCACGGCGGTAACAGGTGTTCGAATCCCCTAGGGGACGACACTTGATGGTCTGTGAGACAAAGTAACCTGCCTTAATATATCAAAACta > 1:1984516/1‑92 (MQ=11) ccTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTc < 2:1727707/93‑1 (MQ=35) ccTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTc < 2:1163807/93‑1 (MQ=35) ccTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTc < 1:2632264/93‑1 (MQ=35) ccTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTc > 1:2782328/1‑93 (MQ=35) ccTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTc > 1:1195112/1‑93 (MQ=35) cTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCa < 2:1895465/93‑1 (MQ=35) cTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCa < 2:1733095/93‑1 (MQ=35) cTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCa > 1:2295241/1‑93 (MQ=35) tttCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCAt < 2:2220477/93‑1 (MQ=35) tttCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCAt > 2:1638169/1‑93 (MQ=35) tttCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCAt > 2:710575/1‑93 (MQ=35) tttCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCAt > 1:4047053/1‑93 (MQ=35) tttCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCAt > 1:4047052/1‑93 (MQ=35) tttCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCAt < 1:3847655/93‑1 (MQ=35) | ACACAGATTGTCTGATAGGAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCAT > NC_000913/3941000‑3941182 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |