Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,603,7761.G72.6% 180.4 / 78.4 84noncoding (80/87 nt)leuPtRNA‑Leu
Reads supporting (aligned to +/- strand):  ref base . (8/15);  new base G (47/14);  total (55/29)
Fisher's exact test for biased strand distribution p-value = 5.92e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 109 total aligned reads displayed.

AAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑GACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAA  >  NC_000913/4603684‑4603868
                                                                                              |                                                                                              
aaGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑Ga                                                                                                 >  1:2524460/1‑93 (MQ=255)
  ggACACTAACACCTGAAGCTAGCGCATCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑gg                                                                                             <  2:2244617/93‑1 (MQ=255)
  ggACACTAACACCTGAAGCTAGCCCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑gg                                                                                             <  1:2241410/93‑1 (MQ=255)
   gACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑ggg                                                                                            <  2:316765/93‑1 (MQ=255)
    acacTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑gggg                                                                                           <  2:714019/93‑1 (MQ=255)
     cacTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑ggggg                                                                                          >  1:2747387/1‑93 (MQ=255)
     cacTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑ggggg                                                                                          <  1:2506968/93‑1 (MQ=255)
      acTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑gggggg                                                                                         <  2:2145487/93‑1 (MQ=255)
       cTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑ggggggg                                                                                        >  1:1921888/1‑93 (MQ=255)
        tAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑ggggggg‑g                                                                                      >  1:2022328/1‑93 (MQ=255)
          acacCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑ggggggg‑ggg                                                                                    >  1:4647106/1‑91 (MQ=255)
            acCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCTTCTTACTTTTTTTGATATGGCCTCGTTGGGTGC‑GA‑‑ggggggg‑gggtg                                                                                  >  2:3774976/1‑89 (MQ=25)
            acCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGTCTCGTTTGGTGC‑GA‑‑GGGCGGG‑GGCtt                                                                                  >  1:2001617/1‑93 (MQ=255)
                    cTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑GGCTTGAAccccc                                                                          <  1:3098499/93‑1 (MQ=255)
                     tAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAGGGGGGGGG‑GGCTTGAAcccc                                                                           >  1:2590302/1‑93 (MQ=38)
                     tAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAAccccc                                                                          >  1:3568740/1‑93 (MQ=255)
                      accgccTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCa                                                                         <  1:3676543/91‑1 (MQ=38)
                      aGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCa                                                                         <  2:3829325/93‑1 (MQ=38)
                      aGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCa                                                                         >  2:3948404/1‑93 (MQ=255)
                       gcgcGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAGGGGGGGGG‑GGCTTGAAcccccc                                                                         >  2:3780433/1‑92 (MQ=38)
                       gcgcGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAAccccccc                                                                        >  2:4389187/1‑91 (MQ=38)
                       gcgcGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCAc                                                                        >  1:4668881/1‑93 (MQ=255)
                        cgcgTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACg                                                                       >  1:1256454/1‑93 (MQ=255)
                         gcgTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAAccccccggc                                                                      >  2:3673879/1‑89 (MQ=38)
                         gcgTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCCCgc                                                                      >  2:1758630/1‑92 (MQ=38)
                          cgTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTc                                                                     >  1:2739044/1‑93 (MQ=255)
                           gTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑GGCTTGAACCCCCACGTCCg                                                                   >  1:299559/1‑93 (MQ=255)
                           gTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑GGCTTGAACCCCCACGTCCg                                                                   <  1:571210/93‑1 (MQ=255)
                            tCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCg                                                                   >  2:2697440/1‑93 (MQ=255)
                              tACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTa                                                                 >  1:2843826/1‑93 (MQ=255)
                              tACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTa                                                                 >  1:4355969/1‑93 (MQ=255)
                              tACAAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTa                                                                 <  2:2931224/93‑1 (MQ=38)
                                 cAATTCCGCCACCTTCGCACAGTCATCTTCCTTTTTTTCATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑G‑CTTGAACCCCCACGTCCGTAAGAac                                                            <  2:197084/93‑1 (MQ=37)
                                   aTTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGGTTGAACCCCCCCGGCCCTAAGaaa                                                            >  2:3855958/1‑92 (MQ=255)
                                    ttCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGGTTGAACCCCCACCGCCCGAAGAaca                                                           >  2:2473454/1‑93 (MQ=255)
                                    ttCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAaca                                                           <  1:2425974/93‑1 (MQ=38)
                                          cACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAacc                                                     >  1:2564669/1‑92 (MQ=37)
                                          cACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAaca                                                     >  1:4440171/1‑93 (MQ=255)
                                          cACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAaca                                                     >  1:515131/1‑93 (MQ=255)
                                          cACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAaca                                                     >  2:672505/1‑93 (MQ=255)
                                           aCCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑GACTTGACCCCCCACGTCCGTAAGAACACTAACAcc                                                   <  1:3789699/93‑1 (MQ=255)
                                            ccTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACAcc                                                   >  1:2501110/1‑93 (MQ=255)
                                              ttCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGGACACTAACACCTg                                                 >  1:3403817/1‑93 (MQ=21)
                                              ttCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCta                                                 >  2:341460/1‑92 (MQ=25)
                                              ttCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGCACGAATACTAACACCTg                                                 >  2:3284953/1‑93 (MQ=25)
                                              ttCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGa                                                <  2:2810135/93‑1 (MQ=255)
                                              ttCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑G‑CTTGAACCCCCACGTCCGTAAGAACACTAACACCTGaa                                               <  1:3029176/93‑1 (MQ=255)
                                              ctCGCACAGTCATCTTACTTTTGTTGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑G‑CTTGAACCCCCACGTCCGTAAGAACACTAACACCTGaa                                               <  1:3029175/92‑1 (MQ=255)
                                               tCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGa                                                >  1:1482726/1‑93 (MQ=255)
                                                    caGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAg                                          <  1:1831355/93‑1 (MQ=255)
                                                    caGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAg                                          <  2:1690844/93‑1 (MQ=255)
                                                    caGTCAACTTTCTTTTTTAGATTTCCCCTCGTTTGGCGG‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTa                                           <  2:1118610/93‑1 (MQ=17)
                                                     aGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAg                                          >  2:3461533/1‑93 (MQ=255)
                                                        cATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAgcgc                                       <  1:4032663/93‑1 (MQ=255)
                                                        cATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAgcgc                                       >  2:1616656/1‑93 (MQ=255)
                                                          tCTTCCTTTTTTTGATATCCCCTTGTTTGGTGC‑GA‑‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTc                                    <  2:602757/93‑1 (MQ=17)
                                                          tCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTc                                    >  2:535779/1‑93 (MQ=255)
                                                           cTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTc                                    >  1:2543237/1‑93 (MQ=255)
                                                           cTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTc                                    <  1:2537180/93‑1 (MQ=255)
                                                           cTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTc                                    >  1:2283771/1‑93 (MQ=255)
                                                             tACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTAc                                 >  1:1832867/1‑93 (MQ=255)
                                                             tACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTAc                                 <  1:327789/93‑1 (MQ=255)
                                                              aCTTTTTTTGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTAc                                 >  1:4640917/1‑93 (MQ=255)
                                                              aCTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑AGCTTGCACCCCCACGCCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTAcc                                >  2:2243228/1‑93 (MQ=18)
                                                               cTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCa                               <  2:596122/93‑1 (MQ=255)
                                                                tttttttGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCa                               >  1:1302093/1‑93 (MQ=255)
                                                                tttttttGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCa                               >  1:4068278/1‑93 (MQ=255)
                                                                tttttttGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCaa                              >  2:1064065/1‑93 (MQ=255)
                                                                 ttttttGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCaa                              >  2:2709980/1‑93 (MQ=255)
                                                                  tttttGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAAtt                            <  2:3071549/93‑1 (MQ=255)
                                                                  tttttGATAACGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAAt                             <  1:3270912/93‑1 (MQ=17)
                                                                    tttGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTc                           >  1:2293817/1‑93 (MQ=255)
                                                                    tttGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTc                           <  1:1828931/93‑1 (MQ=255)
                                                                     ttGATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTcc                          <  1:574775/93‑1 (MQ=255)
                                                                       gATATCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCCCGCCCGTAAAACAATTAAAACCGAAACCTACGGGGCCTACCAATTcccc                        >  2:3760651/1‑91 (MQ=12)
                                                                         tatCGCCTCGTTTGGTGC‑GAGGGGGGGGG‑GTCTTGACCCCCCACGTCCGTAAGACCACTAAAACCTGAAGCTAGCGCGTCTACCAATTCCGcc                       >  1:630903/1‑93 (MQ=14)
                                                                          atCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCAc                     >  2:3557263/1‑93 (MQ=255)
                                                                          atCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAAAACTAACACCTGAGGTTAGCGGGTCTACCAATTACGCCAc                     >  1:1893547/1‑93 (MQ=14)
                                                                          atCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCAAGTCCGTAAGAACACTAACACCTGAAGCTAGCGGGTCTACCAATTTCGCCAc                     >  2:490858/1‑93 (MQ=14)
                                                                           tCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGGGCGGCTACCAATTCCGCCAcc                    >  1:3790382/1‑93 (MQ=14)
                                                                           tCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCAcc                    >  2:1218173/1‑93 (MQ=255)
                                                                           tCGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAAAACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCAcc                    >  2:4651057/1‑93 (MQ=14)
                                                                            cGCCTTGTTTGGTGC‑GA‑‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCtt                  <  2:4710870/93‑1 (MQ=255)
                                                                            cGCCTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCt                   <  2:4528659/93‑1 (MQ=255)
                                                                             gCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑GACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTc                 >  2:4137916/1‑93 (MQ=40)
                                                                              ccTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTc                 >  1:1708487/1‑93 (MQ=255)
                                                                              ccTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTc                 >  2:2239071/1‑93 (MQ=255)
                                                                               cTCGTTTGGTGC‑GAGGGGGGGGG‑GGCTTGAACCCCCCCGTCCGTAAAAACACAAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCCCCTTc                 >  2:3582200/1‑93 (MQ=14)
                                                                               cTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCg                <  1:611614/93‑1 (MQ=255)
                                                                               cTCGTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCg                <  1:2464417/93‑1 (MQ=255)
                                                                                  gTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGccc             <  2:719018/93‑1 (MQ=255)
                                                                                  gTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGccc             >  2:1827168/1‑93 (MQ=255)
                                                                                  gTTTGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcat             >  1:4061083/1‑91 (MQ=11)
                                                                                   tttGGTGCGGG‑‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCa            <  2:2717891/93‑1 (MQ=11)
                                                                                   tttGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcata            >  1:450074/1‑90 (MQ=1)
                                                                                   tttGGTGC‑GAG‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCa            <  1:780146/93‑1 (MQ=255)
                                                                                          c‑GA‑‑GGGGGGGTGGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAg     <  2:2529680/93‑1 (MQ=255)
                                                                                          c‑GA‑‑GGGGGGGTGGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAg     <  2:2529681/93‑1 (MQ=255)
                                                                                          c‑GA‑‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGc    >  2:808297/1‑93 (MQ=255)
                                                                                             a‑‑GGGGGGG‑GGCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCaa  <  2:2936154/93‑1 (MQ=255)
                                                                                              |                                                                                              
AAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGC‑GA‑‑GGGGGGG‑GACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAA  >  NC_000913/4603684‑4603868

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑