Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,916,382 A→G V368V (GTT→GTC atpA ← membrane‑bound ATP synthase, F1 sector, alpha‑subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,916,3820AG96.9% 691.2 / 6.3 228V368V (GTT→GTCatpAmembrane‑bound ATP synthase, F1 sector, alpha‑subunit
Reads supporting (aligned to +/- strand):  ref base A (3/4);  new base G (89/132);  total (92/136)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01

Only 100 of 231 total aligned reads displayed.

TGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAAC  >  NC_000913/3916292‑3916469
                                                                                           |                                                                                       
tgCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGAc                                                                                       >  1:1017900/1‑93 (MQ=255)
 gCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGAcc                                                                                      <  2:3940908/93‑1 (MQ=255)
 gCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAAAACGGGATACGGAAATAACCGGGTTGAcc                                                                                      >  1:1957296/1‑93 (MQ=255)
     gagCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAg                                                                                  <  2:1174410/93‑1 (MQ=255)
     gagCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAg                                                                                  <  1:2836527/93‑1 (MQ=255)
      agCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAgg                                                                                 <  1:783164/93‑1 (MQ=255)
       gCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATTCGGAAATACCCGGGTTGACCGCAGGa                                                                                <  1:2786300/93‑1 (MQ=255)
       gCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGa                                                                                <  1:1061854/93‑1 (MQ=255)
       gCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGa                                                                                <  1:3130087/93‑1 (MQ=255)
       gCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGa                                                                                <  2:2943154/93‑1 (MQ=255)
        cGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGAc                                                                               <  1:98259/93‑1 (MQ=255)
          gTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGa                                                                             >  1:2884730/1‑93 (MQ=255)
           tACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGTTGCACCACCACCCCGGGATCGTACAATCCCCGGTTTGACCGCAGAACaaa                                                                            >  1:1500276/1‑93 (MQ=255)
            aCGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAt                                                                           <  1:3921931/93‑1 (MQ=255)
             cGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATa                                                                          <  2:365755/93‑1 (MQ=255)
             cGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATa                                                                          <  2:186255/93‑1 (MQ=255)
             cGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATa                                                                          >  2:2883348/1‑93 (MQ=255)
               gATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATAcc                                                                        <  1:1622958/93‑1 (MQ=255)
                aTACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCg                                                                       <  2:1511247/93‑1 (MQ=255)
                aTACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCg                                                                       <  1:2371932/93‑1 (MQ=255)
                    caccGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGt                                                                   <  2:2942183/93‑1 (MQ=255)
                    caccGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGt                                                                   >  2:666530/1‑93 (MQ=255)
                      ccGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTg                                                                 >  1:1142479/1‑93 (MQ=255)
                        ggACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGaa                                                               >  2:2168154/1‑93 (MQ=255)
                        ggACAGTTTTTTCATGATCTTGGCCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGaa                                                               <  2:2593384/93‑1 (MQ=255)
                         gACGGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAAc                                                              >  1:2190275/1‑93 (MQ=255)
                         gACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAAc                                                              >  1:1585320/1‑93 (MQ=255)
                         gACAGTTTTGTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAAc                                                              <  1:2086019/93‑1 (MQ=255)
                           cAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAg                                                            <  1:1241319/93‑1 (MQ=255)
                           cAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAg                                                            <  2:1580662/93‑1 (MQ=255)
                           cAGTTTATTCATGATATAGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGCATACCGGCGTTGAAAAg                                                            <  2:4218689/93‑1 (MQ=255)
                            aGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAgg                                                           <  1:2173960/93‑1 (MQ=255)
                             gTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggt                                                          <  2:3316167/93‑1 (MQ=255)
                              ttttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggtt                                                         >  1:3175452/1‑93 (MQ=255)
                               tttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggttg                                                        <  1:1260301/93‑1 (MQ=255)
                                ttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggttgg                                                       >  2:1381079/1‑93 (MQ=255)
                                ttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggttgg                                                       <  1:1681582/93‑1 (MQ=255)
                                  ttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggttggtt                                                     <  2:3145801/93‑1 (MQ=255)
                                  ttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggttggtt                                                     <  1:3173435/93‑1 (MQ=255)
                                   tCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGttt                                                    >  2:243135/1‑93 (MQ=255)
                                    cATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTc                                                   <  1:845547/93‑1 (MQ=255)
                                     aTGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTcc                                                  <  1:2119020/93‑1 (MQ=255)
                                     aTGAGCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATCCCGGCGTTGAACAGGTTGGTTTcc                                                  <  1:1727935/93‑1 (MQ=255)
                                       taTCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAg                                                <  1:3364725/92‑1 (MQ=255)
                                       gATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAg                                                <  2:4530876/93‑1 (MQ=255)
                                         tCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGa                                              >  1:1375648/1‑93 (MQ=255)
                                          cTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGaa                                             >  1:4091190/1‑93 (MQ=255)
                                           ttGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAg                                            >  2:3192580/1‑93 (MQ=255)
                                           ttGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAg                                            >  2:219916/1‑93 (MQ=255)
                                             ggTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGAt                                          >  2:617035/1‑93 (MQ=255)
                                             ggTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGAt                                          <  1:1943931/93‑1 (MQ=255)
                                             ggTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGAt                                          <  1:2983717/93‑1 (MQ=255)
                                               tCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCt                                        >  2:2522524/1‑93 (MQ=255)
                                               tCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCt                                        <  2:1780502/93‑1 (MQ=255)
                                                 tgtgCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGa                                      >  2:3453946/1‑93 (MQ=255)
                                                   tgctgcACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGAcc                                    >  2:142924/1‑93 (MQ=255)
                                                    gctgcACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCa                                   <  1:611342/93‑1 (MQ=255)
                                                    gctgcACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCa                                   <  2:43623/93‑1 (MQ=255)
                                                     ctgcACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCAt                                  >  1:914064/1‑93 (MQ=255)
                                                      tgcACCAACAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATc                                 <  1:563158/93‑1 (MQ=255)
                                                        caccacCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCgg                               <  1:3605086/93‑1 (MQ=255)
                                                         accaccAACACGGGATACGGAAATGCCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGt                              <  1:3528980/93‑1 (MQ=255)
                                                         accaccAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTCACCATCGGt                              >  2:3566334/1‑93 (MQ=255)
                                                         accaccAACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGt                              <  2:1555988/93‑1 (MQ=255)
                                                          ccaccaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTa                             >  2:1955991/1‑93 (MQ=255)
                                                          ccaccaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTa                             >  1:3346106/1‑93 (MQ=255)
                                                           caccaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTaa                            >  1:2002285/1‑93 (MQ=255)
                                                           caccaACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTaa                            <  2:3134585/93‑1 (MQ=255)
                                                            accaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAAt                           <  2:8030/93‑1 (MQ=255)
                                                            accaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAAt                           <  1:878319/93‑1 (MQ=255)
                                                             ccaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATg                          >  1:2483641/1‑93 (MQ=255)
                                                              caACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATgg                         <  1:383608/93‑1 (MQ=255)
                                                              caACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATgg                         <  2:379401/93‑1 (MQ=255)
                                                               aaCACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGga                        >  2:2483114/1‑93 (MQ=255)
                                                               aaCACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGga                        >  1:2629643/1‑93 (MQ=255)
                                                                acacGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGgag                       >  2:670797/1‑93 (MQ=255)
                                                                 cacGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGgaga                      <  2:1456227/93‑1 (MQ=255)
                                                                 cacGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGgaga                      <  2:4633084/93‑1 (MQ=255)
                                                                  acGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGAt                     >  2:2024646/1‑93 (MQ=255)
                                                                  acGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGAt                     >  2:4441847/1‑93 (MQ=255)
                                                                   cGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGAtt                    <  2:2142462/93‑1 (MQ=255)
                                                                    gggATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTa                   <  2:1643779/93‑1 (MQ=255)
                                                                    gggATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTa                   >  2:1117495/1‑93 (MQ=255)
                                                                     ggATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTAc                  <  2:4711979/93‑1 (MQ=255)
                                                                     ggATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTAc                  <  2:1398873/93‑1 (MQ=255)
                                                                     ggATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTAc                  <  1:4296767/93‑1 (MQ=255)
                                                                       aTACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGt                <  1:1198257/93‑1 (MQ=255)
                                                                       aTACGGAAATACCCGGGTTCACCGCAGGACGAATCCCGGAGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGt                <  1:2966621/93‑1 (MQ=255)
                                                                         aCGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTg              <  2:87280/93‑1 (MQ=255)
                                                                         aCGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTg              <  1:402597/93‑1 (MQ=255)
                                                                          cGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTGCGTTgg             <  1:3007439/93‑1 (MQ=255)
                                                                          cGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTgg             <  1:2236528/93‑1 (MQ=255)
                                                                           ggAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGt            <  2:303141/93‑1 (MQ=255)
                                                                            gAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTc           >  2:3248957/1‑93 (MQ=255)
                                                                               aaTACCCGGGTTGACCGCAGGACGAATTCCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCgg         <  1:1510933/93‑1 (MQ=255)
                                                                                 tACCCGTGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGgaa       <  1:4742657/93‑1 (MQ=255)
                                                                                  aCCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGgaac      <  1:2257481/93‑1 (MQ=255)
                                                                                  aCCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGgaac      >  1:2270610/1‑93 (MQ=255)
                                                                                    ccGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGgaacga    >  1:4463738/1‑93 (MQ=255)
                                                                                      gggTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGgaacgaac  >  1:2888853/1‑93 (MQ=255)
                                                                                           |                                                                                       
TGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAAC  >  NC_000913/3916292‑3916469

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: