BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,938,723	C→T	R28R (CGG→CGA)	yiePs ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,938,723	0	C	T	97.1%	845.4 / 3.6	245	R28R (CGG→CGA)	yiePs	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (2/5); new base T (144/94); total (146/99)
Fisher's exact test for biased strand distribution p-value = 1.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 248 total aligned reads displayed.

GTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAA  >  NC_000913/3938633‑3938812

gTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCg                                                                                         <  1:769553/93‑1 (MQ=255)

gTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCg                                                                                         >  1:4676182/1‑93 (MQ=255)

gTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCg                                                                                         >  1:3783538/1‑93 (MQ=255)

 tGATCTGTGACCTGATGAAATTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGa                                                                                        <  2:2846933/93‑1 (MQ=255)

 tGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGa                                                                                        <  1:932481/93‑1 (MQ=255)

   aTCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGt                                                                                      <  2:2523703/93‑1 (MQ=255)

    tCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTa                                                                                     >  1:3312362/1‑93 (MQ=255)

      gATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTAcc                                                                                   >  1:1737705/1‑93 (MQ=255)

        tGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCaa                                                                                 <  2:1144483/93‑1 (MQ=255)

         gACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAAt                                                                                >  2:844649/1‑93 (MQ=255)

         gACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAAt                                                                                >  2:4506496/1‑93 (MQ=255)

          aCCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAAtt                                                                               >  2:2119472/1‑93 (MQ=255)

            cTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATtcg                                                                             >  1:323699/1‑93 (MQ=255)

             tgatgaAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATtcgc                                                                            <  1:4121123/93‑1 (MQ=255)

             tgatgaAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATtcgc                                                                            >  1:2132508/1‑93 (MQ=255)

             tgatgaAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATtcgc                                                                            >  2:2973766/1‑93 (MQ=255)

             tgatgaAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATtcgc                                                                            <  2:4034347/93‑1 (MQ=255)

              tatgaAAATTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTTCCAATtcgcg                                                                           <  2:1584718/92‑1 (MQ=255)

               atgaAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATtcgcgg                                                                          <  1:1821654/93‑1 (MQ=255)

                tgaAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATtcgcggt                                                                         >  2:1883070/1‑93 (MQ=255)

                tgaAAGTTCACTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATtcgcggt                                                                         >  2:3141699/1‑93 (MQ=255)

                 gaAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATtcgcggtc                                                                        >  1:286204/1‑93 (MQ=255)

                  aaaGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATtcgcggtcg                                                                       <  2:4701906/93‑1 (MQ=255)

                   aaGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATtcgcggtcgc                                                                      <  1:3588151/93‑1 (MQ=255)

                   aaGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATtcgcggtcgc                                                                      >  1:3458373/1‑93 (MQ=255)

                    aGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATtcgcggtcgcg                                                                     <  1:552341/93‑1 (MQ=255)

                     gTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATtcgcggtcgcgg                                                                    >  1:1799781/1‑93 (MQ=255)

                           ttctGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAAc                                                              >  1:2287034/1‑93 (MQ=255)

                           ttctGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAAc                                                              <  2:2697765/93‑1 (MQ=255)

                           ttctGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAAc                                                              >  2:2708392/1‑93 (MQ=255)

                             ctGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCa                                                            <  1:671707/93‑1 (MQ=255)

                             ctGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCa                                                            >  2:4200046/1‑93 (MQ=255)

                               gTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATc                                                          <  1:3021552/93‑1 (MQ=255)

                               gTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATc                                                          >  1:353129/1‑93 (MQ=255)

                               gTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATc                                                          >  2:655808/1‑93 (MQ=255)

                                tCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATcc                                                         >  2:3783452/1‑93 (MQ=255)

                                tCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATcc                                                         >  1:3904171/1‑93 (MQ=255)

                                  aTCCGCCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCt                                                       <  2:3282849/93‑1 (MQ=255)

                                  aTCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCt                                                       >  2:1697594/1‑93 (MQ=255)

                                   tCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCtt                                                      <  1:4736427/93‑1 (MQ=255)

                                      accaGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTg                                                   <  1:338935/93‑1 (MQ=255)

                                         aGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCg                                                >  1:1266938/1‑93 (MQ=255)

                                         aGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCg                                                >  2:3980749/1‑93 (MQ=255)

                                         aGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCg                                                >  2:4294140/1‑93 (MQ=255)

                                          ggTAAGCCATTCCTGATCAAGAAAATTCCGGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGGCGCGGTAAAACCATCCCTTTTGCCGt                                               >  2:4227568/1‑93 (MQ=255)

                                          ggTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGt                                               >  1:1014387/1‑93 (MQ=255)

                                          ggTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGt                                               >  2:3923114/1‑93 (MQ=255)

                                           gTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGtt                                              <  1:1998864/93‑1 (MQ=255)

                                           gTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGtt                                              <  1:1923414/93‑1 (MQ=255)

                                           gTAAGCAAGTCCTGATAAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGtt                                              <  2:3773008/93‑1 (MQ=255)

                                             aaGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTaa                                            <  2:2471552/93‑1 (MQ=255)

                                              aGCAATTCCTGATCAAGAAAATTCCAGTTAGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAAc                                           >  2:2081600/1‑93 (MQ=255)

                                               gCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAAct                                          >  1:3165168/1‑92 (MQ=255)

                                               gCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACg                                          <  1:1664891/93‑1 (MQ=255)

                                                  aTTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGttt                                       >  2:523781/1‑93 (MQ=255)

                                                  aTTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGttt                                       <  2:181287/93‑1 (MQ=255)

                                                  aTTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGttt                                       >  1:2388369/1‑93 (MQ=255)

                                                   ttCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGtttt                                      >  1:2651474/1‑93 (MQ=255)

                                                   ttCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGtttt                                      <  2:2012304/93‑1 (MQ=255)

                                                    tCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTg                                     >  2:3387327/1‑93 (MQ=255)

                                                    tCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTg                                     <  1:3257247/93‑1 (MQ=255)

                                                     ccTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGa                                    <  1:1848259/93‑1 (MQ=255)

                                                     ccTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGa                                    <  1:2980711/93‑1 (MQ=255)

                                                      cTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGAc                                   >  1:190994/1‑93 (MQ=255)

                                                      cTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGAc                                   >  1:2268792/1‑93 (MQ=255)

                                                       tGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGAcc                                  >  1:2419724/1‑93 (MQ=255)

                                                       tGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGAcc                                  >  2:760451/1‑93 (MQ=255)

                                                       tGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGAcc                                  <  1:711430/93‑1 (MQ=255)

                                                       tGATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGAcc                                  >  2:706215/1‑93 (MQ=255)

                                                        gATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCg                                 >  1:354116/1‑93 (MQ=255)

                                                        gATCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCg                                 >  2:2287264/1‑93 (MQ=255)

                                                          tCAAGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTTACCGCt                               >  2:1400354/1‑93 (MQ=255)

                                                            aaGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTc                             <  2:2422033/93‑1 (MQ=255)

                                                            aaGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTc                             >  2:2185438/1‑93 (MQ=255)

                                                            aaGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTc                             <  2:4072793/93‑1 (MQ=255)

                                                            aaGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTc                             >  2:4611542/1‑93 (MQ=255)

                                                            aaGAAAATTCCAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTc                             >  1:4447980/1‑93 (MQ=255)

                                                                  aTTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTAc                       <  1:1572641/93‑1 (MQ=255)

                                                                     ccAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGc                    <  1:2368300/93‑1 (MQ=255)

                                                                     ccAGTTCGATTGTGGCATGACTCCAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGc                    <  1:4470713/93‑1 (MQ=255)

                                                                      cAGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCTCGTACCGCt                   >  1:3921288/1‑93 (MQ=255)

                                                                      cAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCt                   <  2:3363813/93‑1 (MQ=255)

                                                                       aGTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTg                  <  2:3086082/93‑1 (MQ=255)

                                                                        gTTCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGt                 >  1:1482498/1‑93 (MQ=255)

                                                                         ttCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTa                >  2:4437951/1‑93 (MQ=255)

                                                                         ttCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTa                >  2:2361461/1‑93 (MQ=255)

                                                                          tCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTAc               >  1:2560527/1‑93 (MQ=255)

                                                                          tCGATTGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTAc               <  2:3453227/93‑1 (MQ=255)

                                                                          tCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTAc               <  2:4271785/93‑1 (MQ=255)

                                                                            gATTGTGGCATGACTCGAGTACAAATTCGCGGTCGCGGCAAAGCCATCCCTTCTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGa             <  1:1096771/93‑1 (MQ=255)

                                                                              ttGTGGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGact           >  1:1745741/1‑93 (MQ=255)

                                                                               tgtgGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGactc          <  2:3649919/93‑1 (MQ=255)

                                                                               tgtgGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGactc          >  2:1180505/1‑93 (MQ=255)

                                                                                 tgGCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGactcac        <  2:81830/93‑1 (MQ=255)

                                                                                  ggCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGactcact       >  2:2251513/1‑93 (MQ=255)

                                                                                  ggCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGactcact       >  1:1525692/1‑93 (MQ=255)

                                                                                   gCATGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGactcactc      >  1:971854/1‑93 (MQ=255)

                                                                                     aTGACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCa    >  1:4314723/1‑93 (MQ=255)

                                                                                       gACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCaaa  <  1:2947928/93‑1 (MQ=255)

                                                                                       gACTCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCaaa  >  1:1645971/1‑93 (MQ=255)

GTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAA  >  NC_000913/3938633‑3938812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`