Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,083,471 A→G intergenic (‑69/‑125) fdoG ← / → fdhD formate dehydrogenase‑O, major subunit/affects formate dehydrogenase‑N

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,083,4710AG98.2% 683.4 / 0.1 218intergenic (‑69/‑125)fdoG/fdhDformate dehydrogenase‑O, major subunit/affects formate dehydrogenase‑N
Reads supporting (aligned to +/- strand):  ref base A (3/1);  new base G (132/82);  total (135/83)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.74e-01

Only 100 of 247 total aligned reads displayed.

ACTGCCTTCTGCTGACCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGAGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAA  >  NC_000913/4083381‑4083560
                                                                                          |                                                                                         
aCTGCCTTCTGCTGACCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAgggagtgggggt                                                                                         >  1:572126/1‑93 (MQ=255)
 cTGCCTTCTGCTGACCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGtt                                                                                        >  1:1114773/1‑93 (MQ=255)
 cTGCCTTCTGCTGACCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGtt                                                                                        <  2:4396563/93‑1 (MQ=255)
  tGCCTTCTGCTGACCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTa                                                                                       >  2:2496435/1‑93 (MQ=255)
  tGCCTTCTGCTGACCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTa                                                                                       >  2:1856048/1‑93 (MQ=255)
    ccTTCTGCTGACCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTAtt                                                                                     <  1:1407292/93‑1 (MQ=255)
     cTTCTGCTGACCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTAttt                                                                                    >  2:569195/1‑93 (MQ=255)
     cTTCTGCTGACCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTAttt                                                                                    >  2:1536873/1‑93 (MQ=255)
      ttCTGCTGACCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTAtttt                                                                                   >  2:56627/1‑93 (MQ=255)
      ttCTGCTGACCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTAtttt                                                                                   >  2:2264011/1‑93 (MQ=255)
       tCTGCTGACCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTAttttt                                                                                  <  2:2805603/93‑1 (MQ=255)
         tgctgACCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCt                                                                                <  2:3349167/93‑1 (MQ=255)
          gctgACCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCtt                                                                               >  1:4231737/1‑93 (MQ=255)
           ctgACCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCttt                                                                              >  1:1269633/1‑93 (MQ=255)
             gACCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGc                                                                            <  2:1347209/93‑1 (MQ=255)
              gccTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCg                                                                           <  1:49810/92‑1 (MQ=255)
              aCCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCg                                                                           <  1:105790/93‑1 (MQ=255)
               ccTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGATGCGTGTGCAGGGAGCGGGGGGTATTTTTATTTGCgg                                                                          >  1:3583664/1‑93 (MQ=255)
                cTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGa                                                                         >  1:732781/1‑93 (MQ=255)
                cTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGa                                                                         >  1:2309651/1‑93 (MQ=255)
                cTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGa                                                                         <  1:256104/93‑1 (MQ=255)
                 tGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGaa                                                                        >  2:3203306/1‑93 (MQ=255)
                 tGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGaa                                                                        <  2:1171604/93‑1 (MQ=255)
                 tGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGaa                                                                        <  1:1971795/93‑1 (MQ=255)
                 tGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGaa                                                                        >  1:3827191/1‑93 (MQ=255)
                  gCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAg                                                                       >  1:4718095/1‑93 (MQ=255)
                  gCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAg                                                                       >  1:1931779/1‑93 (MQ=255)
                    aTGGATTTCTCCTTGTTTCGACAGTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAggg                                                                     <  2:3778014/93‑1 (MQ=255)
                    aTGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAggg                                                                     >  2:35190/1‑93 (MQ=255)
                     tGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAgggg                                                                    >  1:652622/1‑93 (MQ=255)
                       gATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGcc                                                                  >  1:955930/1‑93 (MQ=255)
                        aTTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCg                                                                 <  1:3784223/93‑1 (MQ=255)
                        aTTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCg                                                                 >  2:3082058/1‑93 (MQ=255)
                        aTTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCg                                                                 <  1:1555007/93‑1 (MQ=255)
                         ttGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGc                                                                >  2:2891071/1‑93 (MQ=255)
                         ttGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGc                                                                >  1:4623225/1‑93 (MQ=255)
                            cTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGTGGTTATTTTTCTTTGCGGAAGGGGCCGCaaa                                                             <  2:1451810/93‑1 (MQ=255)
                             tCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAg                                                            >  1:426711/1‑93 (MQ=255)
                             tCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGCTATTTTTCTTTGCGGAAGGGGCCGCAAAg                                                            >  2:1787678/1‑93 (MQ=255)
                             tCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGAGTTATTTTTCTTTGCGGAAGGGGCCGCAAAg                                                            >  2:3826738/1‑93 (MQ=255)
                              ccTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAgg                                                           >  1:1292229/1‑93 (MQ=255)
                               cTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGt                                                          >  2:1871818/1‑93 (MQ=255)
                                ttGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTc                                                         <  2:2169156/93‑1 (MQ=255)
                                 tGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTcc                                                        >  2:3269698/1‑93 (MQ=255)
                                   tttCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAg                                                      <  2:1307636/93‑1 (MQ=255)
                                   tttCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAg                                                      >  2:2924694/1‑93 (MQ=255)
                                   tttCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGGGGGGGGTATTTTTTTTTTCGGAAGGGGGCCGAAAGGACCAg                                                      >  2:4627746/1‑93 (MQ=255)
                                     tCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGaa                                                    <  2:3736144/93‑1 (MQ=255)
                                     tCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGaa                                                    <  2:4078318/93‑1 (MQ=255)
                                      cGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGAGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAAt                                                   >  2:3092326/1‑93 (MQ=255)
                                       gACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAAtt                                                  >  2:4070012/1‑93 (MQ=255)
                                       gACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAAtt                                                  <  1:1722558/93‑1 (MQ=255)
                                       gACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAAtt                                                  <  2:4452734/93‑1 (MQ=255)
                                       gACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATCTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAAtt                                                  <  2:1608181/93‑1 (MQ=255)
                                        aCATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTg                                                 >  2:510385/1‑93 (MQ=255)
                                        aCATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTg                                                 >  1:2599214/1‑93 (MQ=255)
                                         cATTGTCACGTCCCATTTTCATTCGCTTGCTTCGTGTGCAGGGAGAGGGGGTTATTTTTATTTGCGGAAGGGGCCGCAAAGGTTCAGAATTgg                                                >  2:2636074/1‑93 (MQ=255)
                                           ttGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCt                                              <  2:2574109/93‑1 (MQ=255)
                                            tGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTc                                             >  1:3744375/1‑93 (MQ=255)
                                             gTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCa                                            <  1:4528002/93‑1 (MQ=255)
                                                aCGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAAtt                                         >  2:2812100/1‑93 (MQ=255)
                                                aCGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAAtt                                         <  1:3384845/93‑1 (MQ=255)
                                                aCGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAAtt                                         >  2:1386281/1‑93 (MQ=255)
                                                aCGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAAtt                                         >  1:2720861/1‑93 (MQ=255)
                                                aCGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAAtt                                         >  1:3003238/1‑93 (MQ=255)
                                                   tCCCATTTACAATCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTcc                                      >  2:2748091/1‑93 (MQ=255)
                                                      cATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCtc                                   >  1:2121508/1‑93 (MQ=255)
                                                       aTTTACATGCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCtcc                                  <  2:1283902/93‑1 (MQ=255)
                                                        tttACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCtcca                                 <  1:64283/93‑1 (MQ=255)
                                                        tttACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCtcca                                 >  2:2429296/1‑93 (MQ=255)
                                                          tACATTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCtccatc                               >  2:3449091/1‑93 (MQ=255)
                                                             aTTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAg                            >  1:4008937/1‑93 (MQ=255)
                                                             aTTCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATATCCCTCCATCCAg                            <  2:4737364/93‑1 (MQ=255)
                                                              ttCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAgg                           >  1:4727026/1‑93 (MQ=255)
                                                              ttCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAgg                           >  2:1967642/1‑93 (MQ=255)
                                                              ttCGCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAgg                           >  1:4585476/1‑93 (MQ=255)
                                                                 gCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAg                        >  2:817074/1‑93 (MQ=255)
                                                                 gCTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAg                        >  1:2959356/1‑93 (MQ=255)
                                                                  cTTGCTGCGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAgg                       >  1:3698519/1‑93 (MQ=255)
                                                                     gctgcGTGTGCAGGGCGTGGGAGTTATTTTTCTTTGCGCCAGGGGCAGCCAAGGTCATGCATTGGCCGGCTTTGCATTCATCTAGGGAGGGtt                    >  2:1987187/1‑93 (MQ=255)
                                                                     gctgcGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGtt                    <  2:3356085/93‑1 (MQ=255)
                                                                      ctgcGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGttt                   <  1:4685741/93‑1 (MQ=255)
                                                                       tgcGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTg                  >  1:3198641/1‑93 (MQ=255)
                                                                       tgcGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTg                  >  1:2425030/1‑93 (MQ=255)
                                                                       tgcGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTg                  >  1:4150227/1‑93 (MQ=255)
                                                                       tgcGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTg                  >  1:1489919/1‑93 (MQ=255)
                                                                        gcGTGTGCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGt                 <  1:1648579/93‑1 (MQ=255)
                                                                              gCAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGa           >  2:1760150/1‑93 (MQ=255)
                                                                               cAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGaa          <  1:3059436/93‑1 (MQ=255)
                                                                               cAGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGCCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGaa          <  1:4663246/93‑1 (MQ=255)
                                                                                aGGGAGTGGGGGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAAt         >  2:3715419/1‑93 (MQ=255)
                                                                                 gggagtgggggtTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATa        >  1:2180815/1‑93 (MQ=255)
                                                                                 gggagtgggggtTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATa        >  2:688107/1‑93 (MQ=255)
                                                                                  ggagtgggggtTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATAc       <  1:838563/93‑1 (MQ=255)
                                                                                    ggtggggttTATTTTTCTGTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCa     <  2:2324727/92‑1 (MQ=255)
                                                                                    agtgggggtTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCa     <  1:4450956/93‑1 (MQ=255)
                                                                                    agtgggggtTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCa     <  2:365139/93‑1 (MQ=255)
                                                                                     gtgggggtTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCAt    <  2:2057513/93‑1 (MQ=255)
                                                                                     gtgggggtTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCAt    >  1:3441201/1‑93 (MQ=255)
                                                                                       gggggtTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATaa  >  2:4703236/1‑93 (MQ=255)
                                                                                          |                                                                                         
ACTGCCTTCTGCTGACCTGCATGGATTGCTCCTTGTTTCGACATTGTCACGTCCCATTTACATTCGCTTGCTGCGTGTGCAGGGAGTGGGAGTTATTTTTCTTTGCGGAAGGGGCCGCAAAGGTCCAGAATTGGCTCAATTTCCCTCCATCCAGGAAGGGTTTGTAACAGAATACCATAA  >  NC_000913/4083381‑4083560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: