Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,149,200 G→A A493V (GCG→GTG)  ppc ← phosphoenolpyruvate carboxylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,149,2000GA98.5% 426.6 / ‑3.5 130A493V (GCG→GTG) ppcphosphoenolpyruvate carboxylase
Reads supporting (aligned to +/- strand):  ref base G (2/0);  new base A (67/61);  total (69/61)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.23e-01

Only 100 of 135 total aligned reads displayed.

TTGAGCAGCTGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCGCTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGCGGTGCTT  >  NC_000913/4149110‑4149290
                                                                                          |                                                                                          
ttGAGCAGCTGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCAct                                                                                          >  1:1294281/1‑93 (MQ=255)
ttGAGCAGCTGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCAct                                                                                          >  1:4227725/1‑93 (MQ=255)
    gcagcTGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCActtctt                                                                                      >  1:4735827/1‑93 (MQ=255)
    gcagcTGGGTCATGACATCGTTGGCGTTGGTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCActtctt                                                                                      <  1:1512033/93‑1 (MQ=255)
     cagcTGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCttt                                                                                     >  2:1407416/1‑93 (MQ=255)
      agcTGGGCCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGTAGAAACCGGCATCGCAAACCCGATACCCACTACTTTc                                                                                    >  2:2445468/1‑93 (MQ=255)
       gcTGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGCGCAACCGGCATCGCAAACCCGATACACACTTCTTTca                                                                                   >  1:1902323/1‑93 (MQ=255)
       gcTGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTca                                                                                   >  2:883077/1‑93 (MQ=255)
       gcTGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTca                                                                                   <  1:3829805/93‑1 (MQ=255)
       gcTGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTca                                                                                   >  2:3364787/1‑93 (MQ=255)
          gggTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAACCAGCGGAGAAACCGTCATCGCAAACCCGATACCCACTTCTTTcagca                                                                                >  1:4651447/1‑93 (MQ=255)
          gggTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagca                                                                                <  1:1420445/93‑1 (MQ=255)
          gggTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagca                                                                                >  1:4651446/1‑93 (MQ=255)
          gggTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagca                                                                                >  2:1121526/1‑93 (MQ=255)
             tCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagcagca                                                                             <  2:488550/93‑1 (MQ=255)
               aTGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAgg                                                                           >  1:674164/1‑93 (MQ=255)
               aTGACATCGTTGGCGTTGTTCAGATCACCGAGGCTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAgg                                                                           <  2:471191/93‑1 (MQ=255)
                tGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGt                                                                          <  1:218911/93‑1 (MQ=255)
                  aCATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTgg                                                                        <  2:278906/93‑1 (MQ=255)
                  aCATCGTTGGCGTTGTTCAGATCATCGAGGGTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGa                                                                       >  1:2729509/1‑93 (MQ=255)
                   cATCGTTGGAGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGa                                                                       <  1:4366401/93‑1 (MQ=255)
                    aTCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGAc                                                                      <  1:3555202/93‑1 (MQ=255)
                     tCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGGGGGCa                                                                     >  2:46048/1‑93 (MQ=255)
                       gTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGc                                                                   >  2:3957001/1‑93 (MQ=255)
                        ttGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGcc                                                                  >  2:3116020/1‑93 (MQ=255)
                        ttGGCGTTGTTCAGATCATCGAGGGCTTCAAACAGCGGAGCAACCCGCACCGCAAACCCGATACTCACTTCTTTCAGCAGCAGGTGGACAGcc                                                                  >  2:34288/1‑93 (MQ=255)
                         tGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCa                                                                 <  2:2604504/93‑1 (MQ=255)
                          ggCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAg                                                                >  2:4335038/1‑93 (MQ=255)
                            cGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTa                                                              <  2:1229733/93‑1 (MQ=255)
                             gttgttCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTAc                                                             >  2:1058185/1‑93 (MQ=255)
                              ttgttCAGATCATCGAGGGCTTCCAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACg                                                            >  1:879382/1‑93 (MQ=255)
                               tgttCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGt                                                           >  1:2365903/1‑93 (MQ=255)
                                gttCAGATCATCGAGGGCTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGta                                                          >  2:3192211/1‑92 (MQ=255)
                                   taGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGa                                                       <  1:842192/92‑1 (MQ=255)
                                   cAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGa                                                       <  2:2742569/93‑1 (MQ=255)
                                    aGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGGACGTCGGAc                                                      >  2:2458467/1‑93 (MQ=255)
                                     gATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACg                                                     >  2:3359739/1‑93 (MQ=255)
                                     gATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACg                                                     <  1:1465179/93‑1 (MQ=255)
                                      atcatcGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACgg                                                    >  2:2584014/1‑93 (MQ=255)
                                       tcatcGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGc                                                   <  2:435704/93‑1 (MQ=255)
                                       tcatcGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGc                                                   >  2:2981886/1‑93 (MQ=255)
                                         atcGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGt                                                 >  1:4255838/1‑93 (MQ=255)
                                         atcGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGt                                                 <  2:3251456/93‑1 (MQ=255)
                                          tcGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGtt                                                <  1:1173416/93‑1 (MQ=255)
                                          tcGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGtt                                                >  1:2451541/1‑93 (MQ=255)
                                          tcGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGtt                                                >  1:1779582/1‑93 (MQ=255)
                                           cGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGttt                                               <  1:286210/93‑1 (MQ=255)
                                           cGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGttt                                               <  2:1115038/93‑1 (MQ=255)
                                            gAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGtttt                                              <  2:2970552/93‑1 (MQ=255)
                                            gAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATAACCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGtttt                                              <  2:1704235/93‑1 (MQ=255)
                                             aGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTc                                             <  1:4581135/93‑1 (MQ=255)
                                              gggTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCg                                            <  2:1203161/93‑1 (MQ=255)
                                              gggTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCg                                            >  2:649151/1‑93 (MQ=255)
                                                gTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGcc                                          >  1:3102179/1‑93 (MQ=255)
                                                gTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGcc                                          >  1:3579504/1‑93 (MQ=255)
                                                gTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGcc                                          >  2:3829042/1‑93 (MQ=255)
                                                 tttCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCa                                         >  1:2029599/1‑93 (MQ=255)
                                                 tttCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCa                                         >  2:549213/1‑93 (MQ=255)
                                                 tttCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGGTTTCGCCa                                         >  1:2338789/1‑93 (MQ=255)
                                                   tCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATc                                       >  2:3223438/1‑93 (MQ=255)
                                                     aaaCAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCga                                     <  1:2931063/93‑1 (MQ=255)
                                                      aaCAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGCCGGCGTTGTCGCCCTCcag                                    >  2:1175956/1‑93 (MQ=255)
                                                       aCAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCgaga                                   >  2:3693529/1‑93 (MQ=255)
                                                       aCAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCgaga                                   <  2:1469548/93‑1 (MQ=255)
                                                        cAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGAt                                  <  2:3560358/93‑1 (MQ=255)
                                                         aGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATc                                 >  1:2733349/1‑93 (MQ=255)
                                                          gCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCa                                >  1:3777490/1‑93 (MQ=255)
                                                           cGGAGCAACCGGCATCGCAAACCCGATCCCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCAc                               <  1:1910048/93‑1 (MQ=255)
                                                            ggAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACg                              <  2:880840/93‑1 (MQ=255)
                                                             gAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGt                             >  1:495615/1‑93 (MQ=255)
                                                                cAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAgg                          <  1:1747075/93‑1 (MQ=255)
                                                                  aCCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAggcg                        <  2:4445342/93‑1 (MQ=255)
                                                                   ccGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAggcgg                       <  1:4483098/93‑1 (MQ=255)
                                                                   ccGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAggcgg                       >  1:2912158/1‑93 (MQ=255)
                                                                     ggCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCa                     >  2:3237005/1‑93 (MQ=255)
                                                                      gCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCaa                    <  1:1697752/93‑1 (MQ=255)
                                                                       cATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAAt                   <  1:3495097/93‑1 (MQ=255)
                                                                        aTCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATg                  >  1:3817244/1‑93 (MQ=255)
                                                                        aTCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATg                  <  2:790492/93‑1 (MQ=255)
                                                                         tCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATgg                 <  2:4646572/93‑1 (MQ=255)
                                                                         tCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATgg                 <  1:3263479/93‑1 (MQ=255)
                                                                         tCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATgg                 <  2:3897051/93‑1 (MQ=255)
                                                                          cGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGa                <  2:1456302/93‑1 (MQ=255)
                                                                           gCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAg               >  2:2051125/1‑93 (MQ=255)
                                                                           gCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAg               >  2:416830/1‑93 (MQ=255)
                                                                           gCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAg               >  1:527226/1‑93 (MQ=255)
                                                                             aaaCCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGcc             >  2:2973703/1‑93 (MQ=255)
                                                                             aaaCCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGcc             >  1:3392770/1‑93 (MQ=255)
                                                                             aaaCCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGcc             <  2:1685915/93‑1 (MQ=255)
                                                                              aaCCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCt            >  1:4354034/1‑93 (MQ=255)
                                                                               aCCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCtt           >  1:107318/1‑93 (MQ=255)
                                                                                   gATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGCgg       <  1:4107262/93‑1 (MQ=255)
                                                                                   gATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCCGTTTCGCCATCGAGGTCACGTAGGCGGCAATGGAGCCGTgggg       >  2:1886344/1‑93 (MQ=255)
                                                                                   gATACCCACTTCTTTCAGCAGCAGGCGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGCgg       >  2:1886345/1‑93 (MQ=255)
                                                                                     tACCCGCTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGCGGTg     >  1:819803/1‑93 (MQ=255)
                                                                                     tACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGCGGTg     >  2:3025725/1‑93 (MQ=255)
                                                                                     tACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGCGGTg     >  2:843167/1‑93 (MQ=255)
                                                                                     tACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGCGGTg     >  1:4269179/1‑93 (MQ=255)
                                                                                       cccACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGCGGTGCt   >  1:1531423/1‑93 (MQ=255)
                                                                                        ccGCTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGCGGTGCtt  >  1:1555271/1‑93 (MQ=255)
                                                                                          |                                                                                          
TTGAGCAGCTGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCGCTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGCGGTGCTT  >  NC_000913/4149110‑4149290

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: