Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,414,467 A→G intergenic (‑119/‑63) b4189 ← / → yjfP hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,414,4670AG99.6% 778.1 / NA 236intergenic (‑119/‑63)b4189/yjfPhypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (116/119);  total (117/119)
Fisher's exact test for biased strand distribution p-value = 4.96e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 245 total aligned reads displayed.

GGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATACCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTG  >  NC_000913/4414377‑4414556
                                                                                          |                                                                                         
    aaTGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCca                                                                                     <  1:3790928/93‑1 (MQ=255)
     aTGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcag                                                                                    >  1:3858403/1‑93 (MQ=255)
      tGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcagc                                                                                   >  1:1162115/1‑93 (MQ=255)
      tGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcagc                                                                                   >  2:756272/1‑93 (MQ=255)
      tGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcagc                                                                                   >  2:4589351/1‑93 (MQ=255)
      tGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcagc                                                                                   <  1:1433568/93‑1 (MQ=255)
      tGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcagc                                                                                   >  2:337585/1‑93 (MQ=255)
      tGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCcagc                                                                                   >  1:714962/1‑93 (MQ=255)
            cGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAAc                                                                             >  2:3363946/1‑93 (MQ=255)
            cGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAAc                                                                             <  2:232929/93‑1 (MQ=255)
            cGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAAc                                                                             <  1:3070404/93‑1 (MQ=255)
             gAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACt                                                                            >  1:868627/1‑93 (MQ=255)
              aaTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACtt                                                                           <  1:2880024/93‑1 (MQ=255)
              aaTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCAGCCAGCAGAAACtt                                                                           <  2:872298/93‑1 (MQ=255)
               aTTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTtg                                                                          >  1:1731804/1‑93 (MQ=255)
                    tACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAATTAATGCCGCCAGCAGAAACTTGTGCTa                                                                     >  1:1634334/1‑93 (MQ=255)
                    tACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTa                                                                     >  2:1224891/1‑93 (MQ=255)
                     aCCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTaa                                                                    <  1:1303429/93‑1 (MQ=255)
                     aCCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTaa                                                                    <  2:669416/93‑1 (MQ=255)
                     aCCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTaa                                                                    <  2:2711949/93‑1 (MQ=255)
                     aCCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTaa                                                                    <  1:157307/93‑1 (MQ=255)
                      ccTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAg                                                                   >  2:314149/1‑93 (MQ=255)
                       cTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAgg                                                                  <  1:4553664/93‑1 (MQ=255)
                       cTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAgg                                                                  >  2:275031/1‑93 (MQ=255)
                       cTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAga                                                                  >  1:2719442/1‑92 (MQ=255)
                        tGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGa                                                                 >  1:838798/1‑93 (MQ=255)
                        tGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGa                                                                 <  2:3302875/93‑1 (MQ=255)
                        tGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGa                                                                 <  1:3330351/93‑1 (MQ=255)
                        tGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGa                                                                 <  1:2526550/93‑1 (MQ=255)
                         ggTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAt                                                                <  2:3710088/93‑1 (MQ=255)
                          gTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAtt                                                               >  2:2031946/1‑93 (MQ=255)
                           tACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGAttt                                                              <  2:117631/93‑1 (MQ=255)
                           tACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATACCGCCAGCAGAAACTTGTGCTAAGGAttt                                                              >  2:2098438/1‑93 (MQ=255)
                            aCGGGATTTTCGAATGAAAACGTGACGAAAGCGTACCCGACATCTCAACATTATGACCTATTGCCGCCAGCAGAAGCTTGTGCTAAGGATttc                                                             <  2:2881149/93‑1 (MQ=255)
                             cgcgATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATttct                                                            <  2:3958999/93‑1 (MQ=255)
                                gATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCa                                                         <  2:3546691/93‑1 (MQ=255)
                                gATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCa                                                         <  2:3818625/93‑1 (MQ=255)
                                gATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCa                                                         <  1:4050779/93‑1 (MQ=255)
                                gATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCa                                                         <  1:2061572/93‑1 (MQ=255)
                                gATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCa                                                         >  1:482965/1‑93 (MQ=255)
                                gATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCa                                                         <  2:1720746/93‑1 (MQ=255)
                                   tttCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGt                                                      >  1:4304355/1‑93 (MQ=255)
                                   tttCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGt                                                      <  2:4716157/93‑1 (MQ=255)
                                   tttCGAATGAAAACGTGACGAAAGCGTAAACCACATCTCAACATTATGAACTAATGCCGCCAGCATAAACTTGTGCTAAGGATTTCTTCATGt                                                      >  2:1357210/1‑93 (MQ=255)
                                     tCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCa                                                    <  2:4338851/93‑1 (MQ=255)
                                      cGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCAt                                                   >  2:820750/1‑93 (MQ=255)
                                         aTGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAcc                                                >  1:2512784/1‑93 (MQ=255)
                                         aTGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAcc                                                >  2:3922924/1‑93 (MQ=255)
                                         aTGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAcc                                                >  2:1115104/1‑93 (MQ=255)
                                         aTGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATAcc                                                >  2:157363/1‑93 (MQ=255)
                                          tGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCa                                               <  1:1956156/93‑1 (MQ=255)
                                          tGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCa                                               <  1:1374503/93‑1 (MQ=255)
                                           gAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGACACTTGTGCTAAGGATTTCTTCATGTCATACCAg                                              >  1:4572851/1‑93 (MQ=255)
                                             aaaCGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGAc                                            >  1:489596/1‑93 (MQ=255)
                                                 gTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaaaa                                        >  1:3511079/1‑93 (MQ=255)
                                                  tGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACaaaaa                                       <  2:4005813/93‑1 (MQ=255)
                                                   gACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAg                                      <  2:3530547/93‑1 (MQ=255)
                                                   gACGAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAg                                      >  2:3765889/1‑93 (MQ=255)
                                                      gAAAGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGgag                                   <  1:3368997/93‑1 (MQ=255)
                                                       aaaGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGgaga                                  <  1:3974151/93‑1 (MQ=255)
                                                       aaaGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGgaga                                  <  1:573834/93‑1 (MQ=255)
                                                       aaaGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGgaga                                  >  1:2717579/1‑93 (MQ=255)
                                                        aaGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGgagag                                 <  1:2661558/93‑1 (MQ=255)
                                                         aGCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGgagaga                                >  1:3775185/1‑93 (MQ=255)
                                                          gCGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGAc                               >  1:3545864/1‑93 (MQ=255)
                                                           cggaaCCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACa                              <  1:421773/90‑1 (MQ=255)
                                                           cGTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACa                              <  1:4388502/93‑1 (MQ=255)
                                                            gTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAg                             >  2:2901285/1‑93 (MQ=255)
                                                            gTAACCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAg                             >  2:1092982/1‑93 (MQ=255)
                                                             gaaCCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAga                            <  1:3888575/92‑1 (MQ=255)
                                                              aaCCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGAGAgat                           >  1:65015/1‑93 (MQ=255)
                                                              aaCCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgat                           <  1:4481162/93‑1 (MQ=255)
                                                              aaCCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgat                           <  1:3698855/93‑1 (MQ=255)
                                                              aaCCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgat                           >  2:2147990/1‑93 (MQ=255)
                                                               aCCCACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgatg                          >  1:417111/1‑93 (MQ=255)
                                                                cccACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgatga                         <  2:2201877/93‑1 (MQ=255)
                                                                cccACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgatga                         >  2:2485806/1‑93 (MQ=255)
                                                                 ccACATCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAgatgat                        <  1:464601/93‑1 (MQ=255)
                                                                  cacaTCTCAACATTATGAACTAGTGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGAtt                       <  1:2754044/93‑1 (MQ=255)
                                                                     aTCTCAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGaa                    <  2:3062913/93‑1 (MQ=255)
                                                                      tctcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGaaa                   <  2:4427375/93‑1 (MQ=255)
                                                                      tctcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGaaa                   >  2:3587068/1‑93 (MQ=255)
                                                                       ctcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAAt                  <  2:1145616/93‑1 (MQ=255)
                                                                       ctcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAAt                  >  1:4092767/1‑93 (MQ=255)
                                                                        tcAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATa                 <  1:3635993/93‑1 (MQ=255)
                                                                         cAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAg                >  2:1919184/1‑93 (MQ=255)
                                                                         cAACATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAg                <  2:1880983/93‑1 (MQ=255)
                                                                          aaCATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGa               >  1:3161457/1‑93 (MQ=255)
                                                                           aCATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGaa              <  2:3717275/93‑1 (MQ=255)
                                                                           aCATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGaa              >  2:3205798/1‑93 (MQ=255)
                                                                            cATTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAAt             <  1:1243377/93‑1 (MQ=255)
                                                                             aTTATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATc            <  1:1750244/93‑1 (MQ=255)
                                                                              ttATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCa           <  2:4319593/93‑1 (MQ=255)
                                                                               tATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAc          >  2:642454/1‑93 (MQ=255)
                                                                               tATGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGCATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAc          <  1:1991101/93‑1 (MQ=255)
                                                                                 tGAACTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCAcgc        <  1:2266943/93‑1 (MQ=255)
                                                                                     cTAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGc    <  2:3093699/93‑1 (MQ=255)
                                                                                      tAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCt   >  2:3902354/1‑93 (MQ=255)
                                                                                      tAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCt   <  1:1834286/93‑1 (MQ=255)
                                                                                      tAATGCCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCt   <  2:769069/93‑1 (MQ=255)
                                                                                          |                                                                                         
GGGGAATGTTCCCGAATTGTTACCTGGTACGCGATTTTCGAATGAAAACGTGACGAAAGCGTAACCCACATCTCAACATTATGAACTAATACCGCCAGCAGAAACTTGTGCTAAGGATTTCTTCATGTCATACCAGACAAAAAGGAGAGACAGATGATTGAAATAGAATCACGCGAGCTG  >  NC_000913/4414377‑4414556

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: