Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 744,690 T→C R101R (CGT→CGC ybgL → putative lactam utilization protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913744,6900TC98.8% 508.1 / ‑4.2 160R101R (CGT→CGCybgLputative lactam utilization protein
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (73/85);  total (74/86)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.56e-01

Only 100 of 168 total aligned reads displayed.

GCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGA  >  NC_000913/744600‑744779
                                                                                          |                                                                                         
 cAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCAt                                                                                        <  2:2011279/93‑1 (MQ=255)
 cAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCAt                                                                                        <  2:2011278/93‑1 (MQ=255)
  aGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATg                                                                                       >  1:3683252/1‑93 (MQ=255)
   gCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGt                                                                                      >  2:1173509/1‑93 (MQ=255)
     tGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCa                                                                                    >  1:1043884/1‑93 (MQ=255)
     tGCCGCCAAAAACCGTTTACGCCCAGACGCTGCATCAAATTGGCGCGCTGGCAACGATTGCCCGTCCGCAAGGCGGCGTAATGCGCCATGTCa                                                                                    >  2:1360882/1‑93 (MQ=255)
      gccgccAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCaa                                                                                   <  1:2309126/93‑1 (MQ=255)
      gccgccAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCaa                                                                                   <  1:2309125/93‑1 (MQ=255)
           cAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGc                                                                              >  2:3465076/1‑93 (MQ=255)
           cAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGc                                                                              <  2:2394444/93‑1 (MQ=255)
           cAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGc                                                                              >  2:1217436/1‑93 (MQ=255)
            aGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCa                                                                             >  1:2602594/1‑93 (MQ=255)
            aGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCa                                                                             <  2:783201/93‑1 (MQ=255)
            aGAAACCGCTTACGCCCAGACGCTGTATCTAAATTGCGCGCCGGCAACAATTCTCCGCGCGCCAGCCGGCGTAATGTGCCATGTCAAACCGCa                                                                             >  2:3482989/1‑93 (MQ=255)
             gAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCTCAAGGCGGCGTAATGCGCCATGTCAAACCGCAc                                                                            >  1:4216593/1‑93 (MQ=255)
             gAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCAc                                                                            <  1:1101855/93‑1 (MQ=255)
             gAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCAc                                                                            >  1:882551/1‑93 (MQ=255)
              aaaCCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACg                                                                           <  2:3391403/93‑1 (MQ=255)
               aaCCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACgg                                                                          >  1:3861642/1‑93 (MQ=255)
                 ccGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCa                                                                        >  2:2870444/1‑93 (MQ=255)
                 ccGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCa                                                                        <  2:2312552/93‑1 (MQ=255)
                  cGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCAt                                                                       <  1:3542057/93‑1 (MQ=255)
                  cGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCAt                                                                       >  2:1040735/1‑93 (MQ=255)
                   gTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCAtg                                                                      <  2:2763366/93‑1 (MQ=255)
                   gTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCAtg                                                                      >  2:2122809/1‑93 (MQ=255)
                    tttACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCAtgt                                                                     <  2:2966912/93‑1 (MQ=255)
                    tttACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCAtgt                                                                     >  1:1650397/1‑93 (MQ=255)
                     ttACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCAtgtt                                                                    <  2:4118651/93‑1 (MQ=255)
                         gCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTAc                                                                >  2:4656249/1‑93 (MQ=255)
                           ccAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACaa                                                              >  2:2949748/1‑93 (MQ=255)
                            cAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAAc                                                             >  1:2085606/1‑93 (MQ=255)
                            cAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTAAAACCGCACGGCATGTTGTACAAc                                                             >  2:3583064/1‑93 (MQ=255)
                             aGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAAcc                                                            >  1:3134591/1‑93 (MQ=255)
                             aGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAAcc                                                            <  1:4090820/93‑1 (MQ=255)
                              gACTCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCa                                                           <  1:3150857/93‑1 (MQ=255)
                              gACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCa                                                           <  2:3059325/93‑1 (MQ=255)
                              gACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCa                                                           <  1:4651198/93‑1 (MQ=255)
                              gACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCa                                                           >  2:945286/1‑93 (MQ=255)
                                cGCTTTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAgg                                                         <  1:4554050/93‑1 (MQ=255)
                                 gCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAggc                                                        >  1:1456572/1‑93 (MQ=255)
                                 gCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAggc                                                        <  1:3218852/93‑1 (MQ=255)
                                 gCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAggc                                                        >  1:1863328/1‑93 (MQ=255)
                                   tGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGTCATGTTGTACAACCAggcgg                                                      >  2:3627127/1‑93 (MQ=255)
                                   tGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAggcgg                                                      <  2:2609398/93‑1 (MQ=255)
                                      aTCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGa                                                   >  2:3502765/1‑93 (MQ=255)
                                         aaaTTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGTGCCATGTCAAACCGCACGGCATGTTGTGCAACCAGGCGGCGAaag                                                >  2:2827148/1‑93 (MQ=255)
                                         aaaTTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAaag                                                >  1:1629142/1‑93 (MQ=255)
                                         aaaTTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAaag                                                <  2:3639234/93‑1 (MQ=255)
                                         aaaTTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAaag                                                <  2:4053720/93‑1 (MQ=255)
                                         aaaTTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAaag                                                >  1:4584287/1‑93 (MQ=255)
                                         aaaTTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAaag                                                >  1:224000/1‑93 (MQ=255)
                                          aaTTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAaaga                                               <  1:635800/93‑1 (MQ=255)
                                          aaTTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAaaga                                               <  1:1943746/93‑1 (MQ=255)
                                          aaTTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAaaga                                               <  2:3416217/93‑1 (MQ=255)
                                            ttGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAaagaag                                             <  2:3271878/93‑1 (MQ=255)
                                             tGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGc                                            <  2:3000852/93‑1 (MQ=255)
                                             tGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGc                                            <  1:3076349/93‑1 (MQ=255)
                                             tGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGc                                            <  1:2412375/93‑1 (MQ=255)
                                              ggCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAACCCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGca                                           <  2:1798012/93‑1 (MQ=255)
                                              ggCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGca                                           <  2:737181/93‑1 (MQ=255)
                                               gcgcgcTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGcac                                          <  2:1015539/93‑1 (MQ=255)
                                                   gcTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACt                                      >  1:1376971/1‑93 (MQ=255)
                                                    cTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTg                                     >  1:3367894/1‑93 (MQ=255)
                                                    cTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTg                                     <  1:4478308/93‑1 (MQ=255)
                                                     tGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTgg                                    >  1:295222/1‑93 (MQ=255)
                                                     tGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTgg                                    >  2:4318765/1‑93 (MQ=255)
                                                       gCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCa                                  <  2:2098310/93‑1 (MQ=255)
                                                       gCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCa                                  <  2:321921/93‑1 (MQ=255)
                                                         aaCGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGa                                <  1:1432744/93‑1 (MQ=255)
                                                          aCGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGAc                               >  1:1353947/1‑93 (MQ=255)
                                                           cGATTGCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCAAGTTGTACAACCAGGCGGCGAAAGAAGCACAACGGGCAGACg                              >  1:4194448/1‑93 (MQ=255)
                                                            gATTGGCCGTGCGCAAGTCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGAAGACGc                             >  2:3116611/1‑93 (MQ=255)
                                                                gCCCGTGGGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATc                         <  1:3408524/93‑1 (MQ=255)
                                                                gCCCGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATc                         <  1:355424/93‑1 (MQ=255)
                                                                  ccGTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGc                       <  2:1820572/93‑1 (MQ=255)
                                                                    gTGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCa                     <  2:434930/93‑1 (MQ=255)
                                                                     tGCGCAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCag                    >  2:844406/1‑93 (MQ=255)
                                                                      gcgcAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCaga                   <  2:747509/93‑1 (MQ=255)
                                                                       cgcAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCagag                  <  2:2384466/93‑1 (MQ=255)
                                                                        gcAAGGCGGTGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGGGGCGAAAGAAGCACAACGGCCAGACGCCATCGCCAGAGc                 <  2:507835/93‑1 (MQ=255)
                                                                        gcAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCagagg                 >  2:4284707/1‑92 (MQ=255)
                                                                        gcAAGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGc                 >  1:3929452/1‑93 (MQ=255)
                                                                          aaGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCgg               >  1:2742291/1‑93 (MQ=255)
                                                                          aaGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCgg               >  1:4250007/1‑93 (MQ=255)
                                                                          aaGGCGGCGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCgg               >  2:1667659/1‑93 (MQ=255)
                                                                            ggcggcGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGta             <  1:3463860/93‑1 (MQ=255)
                                                                            ggcggcGTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGta             >  2:2075842/1‑93 (MQ=255)
                                                                             gcggcgTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGtat            <  2:1983705/93‑1 (MQ=255)
                                                                             gcggcgTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGtat            <  1:2888095/93‑1 (MQ=255)
                                                                             gcggcgTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGtat            <  1:2888094/93‑1 (MQ=255)
                                                                              gggcgTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGtata           <  1:4109322/92‑1 (MQ=255)
                                                                               ggcgTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATAc          <  1:65642/93‑1 (MQ=255)
                                                                               ggcgTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATAc          <  2:4674718/93‑1 (MQ=255)
                                                                                gcgTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACg         <  1:171813/93‑1 (MQ=255)
                                                                                  gTAATGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCt       >  1:842526/1‑93 (MQ=255)
                                                                                    aaTGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTg     <  1:3864797/93‑1 (MQ=255)
                                                                                    aaTGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTg     >  2:3804992/1‑93 (MQ=255)
                                                                                     aTGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGc    >  1:1352052/1‑93 (MQ=255)
                                                                                     aTGCGCCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGc    >  1:1142420/1‑93 (MQ=255)
                                                                                       gcgcCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGa  <  1:2477349/93‑1 (MQ=255)
                                                                                          |                                                                                         
GCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGA  >  NC_000913/744600‑744779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: