Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 763,150 T→C I305T (ATC→ACC)  sucC → succinyl‑CoA synthetase beta subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913763,1500TC97.2% 432.1 / ‑0.2 141I305T (ATC→ACC) sucCsuccinyl‑CoA synthetase beta subunit
Reads supporting (aligned to +/- strand):  ref base T (2/2);  new base C (67/70);  total (69/72)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.57e-01

Only 100 of 162 total aligned reads displayed.

TCGTTAAACTGCACGGCGGCGAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCATCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGACGGTATCATCGGCG  >  NC_000913/763060‑763239
                                                                                          |                                                                                         
tCGTTAAACTGCACGGCGGCGAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCAccc                                                                                         >  2:258848/1‑93 (MQ=255)
  gTTAAACTGCACGGCGGCGAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCctc                                                                                       >  2:64501/1‑93 (MQ=255)
  gTTAAACTGCACGGCGGCGAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCctc                                                                                       >  1:3537968/1‑93 (MQ=255)
   ttAAACTGCACGGCGGCGAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCctct                                                                                      <  2:2986033/93‑1 (MQ=255)
    tAAACTGCACGGCGGCGAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCctctc                                                                                     >  2:380591/1‑93 (MQ=255)
    tAAACTGCACGGCGGCGAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCctctc                                                                                     <  2:2307167/93‑1 (MQ=255)
     aaaCTGCACGGCGGCGAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCctctct                                                                                    >  2:751520/1‑93 (MQ=255)
      aaCTGCACGGCGGCGAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTg                                                                                   <  1:2452207/93‑1 (MQ=255)
       aCTGCACGGCGGCGAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTga                                                                                  <  1:3586556/93‑1 (MQ=255)
           cACGGCGGCGAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTgacgac                                                                              <  2:1350433/93‑1 (MQ=255)
           cACGGCGGCGAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTgacgac                                                                              <  2:133708/93‑1 (MQ=255)
               gcggcgAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAg                                                                          <  2:1232950/93‑1 (MQ=255)
                cggcgAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGt                                                                         <  1:4165859/93‑1 (MQ=255)
                 ggcgAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTg                                                                        <  1:2514724/93‑1 (MQ=255)
                 ggcgAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTg                                                                        <  2:4602202/93‑1 (MQ=255)
                  gcgAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGa                                                                       <  2:4344307/93‑1 (MQ=255)
                  gcgAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGa                                                                       >  2:689813/1‑93 (MQ=255)
                    gAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGaaa                                                                     <  1:2988552/93‑1 (MQ=255)
                     aaCCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCATCCTCTCTGACGACAAAGTGAAAg                                                                    >  1:4651582/1‑93 (MQ=255)
                     aaCCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCATCTCTGACGACAAAGTGAAAg                                                                    >  2:2764956/1‑93 (MQ=255)
                      aCCGGCTAACTTCCTTGACGTTGGCGGCGGCGCCACCAAAGAACGTGGAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGc                                                                   >  2:3359383/1‑93 (MQ=255)
                       ccGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGcc                                                                  >  2:3101417/1‑93 (MQ=255)
                       ccGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGcc                                                                  <  2:2682834/93‑1 (MQ=255)
                        cGGCTAACTTCCTTGTCGTTTGCGGCGGCGCTACCTAAGTACGTGTAACCGAATCGTTCAAAATCACCCTCTCTGATGACATTGTGAAATcct                                                                 >  1:4214589/1‑92 (MQ=255)
                        cGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCg                                                                 >  1:1491788/1‑93 (MQ=255)
                        cGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCg                                                                 <  1:1366057/93‑1 (MQ=255)
                        cGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCg                                                                 >  2:1204089/1‑93 (MQ=255)
                           cTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTc                                                              >  1:3030847/1‑93 (MQ=255)
                           cTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTc                                                              <  2:2786033/93‑1 (MQ=255)
                           cTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTc                                                              <  1:4604262/93‑1 (MQ=255)
                            tAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCt                                                             <  2:2771186/93‑1 (MQ=255)
                             aaCTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTg                                                            >  1:586006/1‑93 (MQ=255)
                               cTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGt                                                          >  2:1177034/1‑93 (MQ=255)
                                ttCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGtt                                                         >  2:3932926/1‑93 (MQ=255)
                                   cTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAAc                                                      >  1:4330906/1‑93 (MQ=255)
                                   cTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAAc                                                      >  1:1787151/1‑93 (MQ=255)
                                   cTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAAc                                                      >  1:3168053/1‑93 (MQ=255)
                                      gACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATc                                                   <  1:1304591/93‑1 (MQ=255)
                                      gACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATc                                                   >  2:2900864/1‑93 (MQ=255)
                                      gACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATc                                                   <  2:884659/93‑1 (MQ=255)
                                      gACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATc                                                   <  2:708565/93‑1 (MQ=255)
                                      gACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATc                                                   <  1:2725385/93‑1 (MQ=255)
                                       aCGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCt                                                  >  1:3171365/1‑93 (MQ=255)
                                         gTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTc                                                <  1:1038428/93‑1 (MQ=255)
                                         gTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTc                                                >  1:1961685/1‑93 (MQ=255)
                                         gTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTc                                                <  1:2538166/93‑1 (MQ=255)
                                          ttGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCCCCCTCCCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTcg                                               <  2:3087408/93‑1 (MQ=255)
                                             gcggcggcgCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTcggcg                                            >  1:3799116/1‑93 (MQ=255)
                                              gggcggcgCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCGCCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTcggcgg                                           <  2:2869086/92‑1 (MQ=255)
                                                gcggcgCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTa                                         >  1:2439826/1‑93 (MQ=255)
                                                gcggcgCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTa                                         >  1:4613685/1‑93 (MQ=255)
                                                    cgcAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTAtcgt                                     <  2:2503764/93‑1 (MQ=255)
                                                     gcAATCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTAtcgtt                                    <  1:975849/93‑1 (MQ=255)
                                                     gcAACCAAAGAACGTGTAGCCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCGTCGGCGGTAtcgtt                                    <  2:656703/93‑1 (MQ=255)
                                                     gcAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCATCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTAtcgtt                                    >  1:738032/1‑93 (MQ=255)
                                                      cAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTAtcgttc                                   >  2:4152993/1‑93 (MQ=255)
                                                      cAACCAAAGAACGTGTAACCGAAGCGTTCAAAATAACCCTCTCTGTCGCCAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTTtcgttc                                   >  2:1644282/1‑93 (MQ=255)
                                                       aaCCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTAtcgttcg                                  >  2:3045265/1‑93 (MQ=255)
                                                       aaCCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTAtcgttcg                                  >  1:1258236/1‑93 (MQ=255)
                                                       aaCCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTAtcgttcg                                  >  1:1427081/1‑93 (MQ=255)
                                                       aaCCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTAtcgttcg                                  <  2:3458518/93‑1 (MQ=255)
                                                       aaCCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTAtcgttcg                                  >  2:816370/1‑93 (MQ=255)
                                                        aCCAAAGAACGTGTAACCGAAGCGTTCACAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTAtcgttcgt                                 >  2:4538343/1‑93 (MQ=255)
                                                        aCCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTAtcgttcgt                                 >  1:412706/1‑93 (MQ=255)
                                                        aCCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTAtcgttcgt                                 >  1:2023298/1‑93 (MQ=255)
                                                        aCCAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTAtcgttcgt                                 >  1:2358042/1‑93 (MQ=255)
                                                         ccAAAGAACTTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATcgttcgtt                                <  2:949733/93‑1 (MQ=255)
                                                         ccAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATcgttcgtt                                >  2:1670856/1‑93 (MQ=255)
                                                          cAAAGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTg                               >  2:3592454/1‑93 (MQ=255)
                                                           aaaGACCGTGTAACCGAAGCGTTCAAAATCTCCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGc                              <  2:251767/93‑1 (MQ=255)
                                                           aaaGAACGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGc                              >  1:962033/1‑93 (MQ=255)
                                                               aaCGTGTAACCGAAGCGTTCAAAATCGCCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGAcc                          <  2:3450221/93‑1 (MQ=255)
                                                               aaCGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGAcc                          <  2:1886432/93‑1 (MQ=255)
                                                                 cGTGTAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTg                        >  2:3983901/1‑93 (MQ=255)
                                                                  gtgtAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGa                       <  1:862639/93‑1 (MQ=255)
                                                                  gtgtAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGa                       <  1:2090298/93‑1 (MQ=255)
                                                                   tgtAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTCTCGTTCGTTGCGACCTGAt                      >  1:2168739/1‑93 (MQ=255)
                                                                   tgtAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGAt                      >  2:2543786/1‑93 (MQ=255)
                                                                    gtAACCGAAGCGTTCAAGATCATGCTCTAGGACGACACCGTGAAAGCCGTTCTGGTTAACGTCTTCGGCGGTATCGTTCGTTGCGGCCTGATc                     <  2:2106151/93‑1 (MQ=255)
                                                                    gtAACCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATc                     >  1:692229/1‑93 (MQ=255)
                                                                       aCCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTCCGGCGGTATCGTTCGTTGCGACCTGATCGCt                  >  2:423451/1‑93 (MQ=255)
                                                                       aCCGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTCCGGCGGTATCGTTCGTTGCGACCTGATCGCt                  >  2:423450/1‑93 (MQ=255)
                                                                        ccGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTg                 >  1:1862365/1‑93 (MQ=255)
                                                                        ccGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTg                 >  1:343229/1‑93 (MQ=255)
                                                                         cGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTgc                >  2:3030022/1‑92 (MQ=255)
                                                                         cGAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGa                <  2:3340147/93‑1 (MQ=255)
                                                                          gAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGAc               >  1:4479904/1‑93 (MQ=255)
                                                                          gAAGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGAc               <  2:1100869/93‑1 (MQ=255)
                                                                           aaGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGACg              >  1:4503289/1‑93 (MQ=255)
                                                                            aGCGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGACgg             <  2:2688744/93‑1 (MQ=255)
                                                                              cGTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGACGGTa           <  2:3800414/93‑1 (MQ=255)
                                                                               gTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGACGGTat          <  1:1109905/93‑1 (MQ=255)
                                                                               gTTCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGACGGTat          >  2:207074/1‑93 (MQ=255)
                                                                                ttCAAAATCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTAGGGTTCGTTGCGACCTGATAGCTGACGGTatc         >  1:3701611/1‑93 (MQ=255)
                                                                                   acactcaccCTCTCTGATGACCAAGTGAAAGCCGTTCTGGTTACCATCTTCGACGCTATCGTTCGTTGCGACCTGATCGCTGACGGTatcatc      <  2:3159268/89‑1 (MQ=255)
                                                                                   aaaaTCACCCTCTCTGACGACAAGTTGAAAGCCGTTCTGGTGAACATCTTCGGCGTTATCGTTCGTTGCTACCTGATCGCTGACGGTatcatc      <  1:93335/93‑1 (MQ=255)
                                                                                    aaaTCACCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGACGGTATCATCg     <  2:4530675/93‑1 (MQ=255)
                                                                                      atcaccCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGACGGTATCATCGgc   >  1:3229363/1‑93 (MQ=255)
                                                                                      atcaccCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGACGGTATCATCGgc   >  1:2357042/1‑93 (MQ=255)
                                                                                      atcaccCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGACGGTATCATCGgc   >  2:2197593/1‑93 (MQ=255)
                                                                                          |                                                                                         
TCGTTAAACTGCACGGCGGCGAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCATCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGACGGTATCATCGGCG  >  NC_000913/763060‑763239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: