Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,040,218 G→A A127T (GCA→ACA)  appA → phosphoanhydride phosphorylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,040,2180GA98.2% 388.3 / ‑3.3 115A127T (GCA→ACA) appAphosphoanhydride phosphorylase
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base A (74/38);  total (76/39)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.49e-01

Only 100 of 123 total aligned reads displayed.

AAGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGGCACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCAA  >  NC_000913/1040128‑1040307
                                                                                          |                                                                                         
aaGGGCTGCCCGCAGTCTGGTCCGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAACACAGGCGAAGCCTTCGCCGCCGGGCTGACa                                                                                         >  2:1978657/1‑93 (MQ=255)
aaGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACa                                                                                         >  2:4352565/1‑93 (MQ=255)
aaGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACa                                                                                         >  2:2792008/1‑93 (MQ=255)
aaGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACa                                                                                         >  1:2351674/1‑93 (MQ=255)
  gggCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACAcc                                                                                       >  2:186459/1‑93 (MQ=255)
      tGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGCCACCTGAc                                                                                   >  2:1446370/1‑93 (MQ=255)
      tGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGAc                                                                                   <  1:4341752/93‑1 (MQ=255)
       gCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACt                                                                                  <  2:4584924/93‑1 (MQ=255)
       gCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACt                                                                                  <  2:2957139/93‑1 (MQ=255)
          cGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACtgtg                                                                               >  1:575635/1‑93 (MQ=255)
          cGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACAAGCGTACCCGTAAAACAGGCGAGGCCTTCGCCGCCGGGCTGGCACCTGACtgag                                                                               >  2:440235/1‑91 (MQ=255)
           gCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGc                                                                              >  1:3372463/1‑93 (MQ=255)
            cAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCa                                                                             >  1:2238974/1‑93 (MQ=255)
             aGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCaa                                                                            >  1:1031927/1‑93 (MQ=255)
              gTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAAt                                                                           >  1:3281347/1‑93 (MQ=255)
              gTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAAt                                                                           >  2:1936601/1‑93 (MQ=255)
                 tGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAAc                                                                        >  2:771752/1‑93 (MQ=255)
                  ggTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAAcc                                                                       <  2:1463162/93‑1 (MQ=255)
                  ggTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAAcc                                                                       <  2:3630371/93‑1 (MQ=255)
                  ggTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAAcc                                                                       <  2:3788134/93‑1 (MQ=255)
                  ggTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAAcc                                                                       >  1:3331368/1‑93 (MQ=255)
                   gTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCg                                                                      >  1:3746549/1‑93 (MQ=255)
                    tCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGCGCAATAACCGt                                                                     >  2:3446289/1‑93 (MQ=255)
                      aGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTAc                                                                   >  2:3164396/1‑93 (MQ=255)
                      aGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTAc                                                                   >  2:3164395/1‑93 (MQ=255)
                       ggTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACa                                                                  >  1:4588382/1‑93 (MQ=255)
                       ggTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACa                                                                  <  1:1549333/93‑1 (MQ=255)
                        gTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACAt                                                                 <  1:4478385/93‑1 (MQ=255)
                        gTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACAt                                                                 >  2:1519594/1‑93 (MQ=255)
                        gTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACAt                                                                 >  2:1707223/1‑93 (MQ=255)
                         tCGTGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATa                                                                >  2:3457714/1‑93 (MQ=255)
                          cgcgATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATAc                                                               <  1:2814671/93‑1 (MQ=255)
                           gcgATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCCCCGGGCTGACACCTGACTGTGCAATAACCGTACATAcc                                                              >  1:1860788/1‑93 (MQ=255)
                             gATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCa                                                            >  2:2721846/1‑93 (MQ=255)
                              attattGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAg                                                           >  2:2221891/1‑93 (MQ=255)
                              attattGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAg                                                           <  1:3375233/93‑1 (MQ=255)
                              attattGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAg                                                           >  2:642797/1‑93 (MQ=255)
                                 attGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCa                                                        >  1:888499/1‑93 (MQ=255)
                                  ttGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAg                                                       >  1:3121620/1‑93 (MQ=255)
                                  ttGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAg                                                       >  2:167/1‑93 (MQ=255)
                                  ttGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAg                                                       >  2:166/1‑93 (MQ=255)
                                  ttGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAg                                                       >  1:2421442/1‑93 (MQ=255)
                                     cTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATa                                                    >  2:426806/1‑93 (MQ=255)
                                     cTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATa                                                    >  1:2019516/1‑93 (MQ=255)
                                     cTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATa                                                    >  1:3842921/1‑93 (MQ=255)
                                      tGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATAc                                                   >  1:2134876/1‑93 (MQ=255)
                                      tGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATAc                                                   <  2:2370322/93‑1 (MQ=255)
                                      tGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATAc                                                   <  2:2639243/93‑1 (MQ=255)
                                       gATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACg                                                  >  2:174707/1‑93 (MQ=255)
                                       gATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACg                                                  >  2:1033218/1‑93 (MQ=255)
                                        aTGTCGACGAGCGTCCCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGt                                                 <  2:246021/93‑1 (MQ=255)
                                        aTGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGt                                                 >  2:2567676/1‑93 (MQ=255)
                                          gTCGACGAGCGTCCCCGTAAAGCGGGCGAACCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTcc                                               <  2:132109/93‑1 (MQ=255)
                                          gTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTcc                                               <  1:192080/93‑1 (MQ=255)
                                          gTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTcc                                               <  1:3274227/93‑1 (MQ=255)
                                           tCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCa                                              >  2:3018402/1‑93 (MQ=255)
                                             gaggaGCGTACCCGAAAAACAGGCGAAGCCTTCGCCGCCGGGCTGGCACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGt                                            <  1:2579722/90‑1 (MQ=255)
                                             gacgaGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGt                                            >  2:4591226/1‑93 (MQ=255)
                                             gacgaGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGt                                            <  1:1174159/93‑1 (MQ=255)
                                               ggagaGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTcc                                          <  2:1410907/92‑1 (MQ=255)
                                                gaGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTccc                                         >  2:3345537/1‑93 (MQ=255)
                                                gaGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTccc                                         >  1:1205175/1‑93 (MQ=255)
                                                gaGCGTACCCGTAAAACAGGCGAAGCCTTCACCGCCGGGCTGACACCTGACTATGCAATAACCGTACATACACAGGCGGATACGTCCAGTccc                                         >  2:3345538/1‑93 (MQ=255)
                                                 aGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCg                                        >  1:1206232/1‑93 (MQ=255)
                                                  gCGTCCCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGa                                       <  1:1759993/93‑1 (MQ=255)
                                                  gCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTACAGTCCCGa                                       >  1:2050730/1‑93 (MQ=255)
                                                    gTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCATTTCCGATc                                     >  2:1184539/1‑93 (MQ=255)
                                                    gTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATc                                     <  1:1344598/93‑1 (MQ=255)
                                                     tACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATcc                                    <  1:2144751/93‑1 (MQ=255)
                                                     tACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGCGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATcc                                    >  1:926496/1‑93 (MQ=255)
                                                      aCCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCg                                   <  1:2389931/93‑1 (MQ=255)
                                                       cccGAAAAACGGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGt                                  <  1:1730968/93‑1 (MQ=255)
                                                         cGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTa                                >  2:880712/1‑93 (MQ=255)
                                                         cGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTa                                >  1:3599376/1‑93 (MQ=255)
                                                          gTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTAt                               <  2:1108427/93‑1 (MQ=255)
                                                           tAAAACAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTAtt                              <  1:2667508/93‑1 (MQ=255)
                                                               aCAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAAt                          >  2:1732739/1‑93 (MQ=255)
                                                               aCAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAAt                          <  2:1167888/93‑1 (MQ=255)
                                                                cAGGCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATc                         >  1:1118122/1‑93 (MQ=255)
                                                                  ggCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGCCCCGATCCGTTATTTAATCct                       <  1:4395127/93‑1 (MQ=255)
                                                                   gCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCctc                      <  1:323641/93‑1 (MQ=255)
                                                                   gCGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCctc                      <  2:871706/93‑1 (MQ=255)
                                                                    cGAAGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCctct                     <  1:2119584/93‑1 (MQ=255)
                                                                      aaGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTaa                   >  1:706393/1‑93 (MQ=255)
                                                                      aaGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTaa                   <  2:2716370/93‑1 (MQ=255)
                                                                       aGCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATAGCCAGGCAGATACCGCCAGCTCCGATCCGTTATTTAATTCTCTaaa                  >  2:4564988/1‑93 (MQ=255)
                                                                        gCCTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTaaaa                 >  2:3006069/1‑93 (MQ=255)
                                                                          cTTCGGCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAAc               >  1:2133011/1‑93 (MQ=255)
                                                                          cTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAAc               >  1:4141833/1‑93 (MQ=255)
                                                                          cTTCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAAc               >  1:1961477/1‑93 (MQ=255)
                                                                           ttCGCCGCCGGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGACACGTCCAGTCCCGATCCGTTATTTAACCCCCTAAAACCt              >  1:2780401/1‑93 (MQ=255)
                                                                               ccgccgGGCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCg          <  1:3523111/93‑1 (MQ=255)
                                                                                    gggCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGc     >  1:563457/1‑93 (MQ=255)
                                                                                    gggCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGc     >  1:2776395/1‑93 (MQ=255)
                                                                                    gggCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGc     >  2:1833167/1‑93 (MQ=255)
                                                                                     ggCTGGCACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGcc    >  2:3789211/1‑93 (MQ=255)
                                                                                     ggCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGcc    <  2:1093326/93‑1 (MQ=255)
                                                                                      gCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCa   >  1:3337071/1‑93 (MQ=255)
                                                                                      gCTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCa   >  1:4401264/1‑93 (MQ=255)
                                                                                       cTGACACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCaa  >  1:492886/1‑93 (MQ=255)
                                                                                          |                                                                                         
AAGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGGCACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCAA  >  NC_000913/1040128‑1040307

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: