BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,053,515	T→C	G619G (GGA→GGG)	torS ←	TorS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,053,515	0	T	C	98.3%	362.3 / ‑2.3	117	G619G (GGA→GGG)	torS	TorS
Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (60/54); total (62/55)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.13e-01

Only 100 of 132 total aligned reads displayed.

AAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGTCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCGGGATCAATACCGCAGCCGC  >  NC_000913/1053423‑1053603

  gCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGccc                                                                                        >  1:3158008/1‑93 (MQ=255)

  gCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGccc                                                                                        >  1:2663263/1‑93 (MQ=255)

  gCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGccc                                                                                        >  2:4508400/1‑93 (MQ=255)

  gCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGccc                                                                                        >  2:255124/1‑93 (MQ=255)

   cGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGcccc                                                                                       <  1:4412509/93‑1 (MQ=255)

    gTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGTCCCa                                                                                      <  1:4137440/93‑1 (MQ=255)

    gTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCa                                                                                      <  2:396524/93‑1 (MQ=255)

     tAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAg                                                                                     >  2:2435171/1‑93 (MQ=255)

       aaCAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGcc                                                                                   <  1:951019/93‑1 (MQ=255)

         cAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGATCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCg                                                                                 <  1:1980898/93‑1 (MQ=255)

          aaaaaCAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCgg                                                                                <  2:2535486/93‑1 (MQ=255)

           aaaaCAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGTCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGt                                                                               >  1:2995864/1‑93 (MQ=255)

               cAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTgccg                                                                           <  2:722680/93‑1 (MQ=255)

                aGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGCCGGCTACTGATAGTCAGCCCCACCCAGGTcccgc                                                                          >  2:1236069/1‑93 (MQ=255)

                aGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTgccgc                                                                          >  1:640528/1‑93 (MQ=255)

                    tCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCcgcg                                                                      <  2:288378/93‑1 (MQ=255)

                    tCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCcgcg                                                                      >  2:877982/1‑93 (MQ=255)

                    tCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCcgcg                                                                      <  2:1083155/93‑1 (MQ=255)

                     ccAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGt                                                                     <  1:1803719/93‑1 (MQ=255)

                      cAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGtt                                                                    <  1:3125346/93‑1 (MQ=255)

                      cAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGtt                                                                    <  2:1214215/93‑1 (MQ=255)

                      cAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGtt                                                                    <  2:785553/93‑1 (MQ=255)

                      cAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGtt                                                                    <  2:4384648/93‑1 (MQ=255)

                      cAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGtt                                                                    >  1:4092867/1‑93 (MQ=255)

                          cTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGcc                                                                <  2:645243/93‑1 (MQ=255)

                           tCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCg                                                               >  2:2401861/1‑93 (MQ=255)

                           tCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCg                                                               >  2:289043/1‑93 (MQ=255)

                           tCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCg                                                               >  2:3694687/1‑93 (MQ=255)

                           tCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCg                                                               >  1:2628116/1‑93 (MQ=255)

                            ccGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGc                                                              <  1:873772/93‑1 (MQ=255)

                             cGGCGTGGTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTGCTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTgctgct                                                             <  2:4136909/93‑1 (MQ=255)

                             cGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCt                                                             >  1:1298562/1‑93 (MQ=255)

                              ggCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCtt                                                            <  2:2079675/93‑1 (MQ=255)

                              ggCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCtt                                                            >  1:2308625/1‑93 (MQ=255)

                              ggCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCtt                                                            <  2:374391/93‑1 (MQ=255)

                               gCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTa                                                           >  2:1130391/1‑93 (MQ=255)

                               gCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTa                                                           >  2:3667327/1‑93 (MQ=255)

                               gCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGGTTGCCGCTTa                                                           >  2:3667328/1‑93 (MQ=255)

                                 gTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTAcc                                                         <  2:3353459/93‑1 (MQ=255)

                                  tGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGTCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCt                                                        >  2:4122341/1‑93 (MQ=255)

                                  tGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCt                                                        <  1:3247581/93‑1 (MQ=255)

                                  tGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCt                                                        <  2:4476905/93‑1 (MQ=255)

                                  tGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCt                                                        >  1:4744920/1‑93 (MQ=255)

                                    cTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGc                                                      <  2:3884609/93‑1 (MQ=255)

                                    cTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGc                                                      >  2:2801274/1‑93 (MQ=255)

                                    cTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGc                                                      >  1:4565064/1‑93 (MQ=255)

                                     tggtggCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGca                                                     <  1:3129223/93‑1 (MQ=255)

                                       gtggCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGcaca                                                   <  2:603089/93‑1 (MQ=255)

                                         ggCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACaaa                                                 <  1:3481845/93‑1 (MQ=255)

                                         gcggcTCAGTCCGCC‑CCCATTGGCTGGGCCCGGCGGCTTCCTATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAAt                                                <  1:4646429/90‑1 (MQ=255)

                                           cgcTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATg                                               <  1:1993059/93‑1 (MQ=255)

                                           cgcTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATg                                               <  1:957927/93‑1 (MQ=255)

                                           cgcTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATg                                               <  2:1900325/93‑1 (MQ=255)

                                            gcTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATgg                                              >  1:2575818/1‑93 (MQ=255)

                                             cTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTTCACAAACGGc                                             >  2:132435/1‑93 (MQ=255)

                                             cTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGc                                             <  1:1246524/93‑1 (MQ=255)

                                             cTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGc                                             >  2:132434/1‑93 (MQ=255)

                                              tCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGcg                                            >  1:821820/1‑92 (MQ=255)

                                              tCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCt                                            >  2:4152621/1‑93 (MQ=255)

                                              tCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCt                                            >  1:3760484/1‑93 (MQ=255)

                                              tCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCt                                            >  1:821821/1‑93 (MQ=255)

                                              acAGTTCGCCGCCCATCGCCTGGCCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCt                                            <  2:2672906/92‑1 (MQ=255)

                                               cAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTg                                           <  1:1278241/93‑1 (MQ=255)

                                                aGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTgg                                          >  2:225570/1‑93 (MQ=255)

                                                aGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTgg                                          <  2:672101/93‑1 (MQ=255)

                                                 gTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGa                                         >  2:473657/1‑93 (MQ=255)

                                                  ttCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGaa                                        <  1:2844825/93‑1 (MQ=255)

                                                        gccCATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTc                                  <  1:2357733/93‑1 (MQ=255)

                                                         cccATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCCCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCt                                 >  1:3885883/1‑93 (MQ=255)

                                                          ccATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTg                                >  2:3691651/1‑93 (MQ=255)

                                                           cATCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGc                               >  1:3337171/1‑93 (MQ=255)

                                                            aTCGCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGGAGATTTCTGcc                              >  2:482001/1‑93 (MQ=255)

                                                             tCGCCTGTGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCa                             <  2:1792264/93‑1 (MQ=255)

                                                               gCCTGGGCCCGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGt                           <  2:1309089/93‑1 (MQ=255)

                                                               gCCTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGt                           >  1:1844366/1‑93 (MQ=255)

                                                                ccTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGtt                          <  2:4313254/93‑1 (MQ=255)

                                                                 cTGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGttt                         >  2:4472587/1‑93 (MQ=255)

                                                                 cTGGGCCAGACGGCTACTGATAGTCAGACCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGttt                         >  1:1694122/1‑93 (MQ=255)

                                                                  tGGGCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTc                        >  2:1792006/1‑93 (MQ=255)

                                                                    ggCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTcgc                      >  1:4409516/1‑93 (MQ=255)

                                                                     gCCAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTcgcg                     >  2:3460043/1‑93 (MQ=255)

                                                                      ccAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCgg                    <  1:113197/93‑1 (MQ=255)

                                                                       cAGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCggg                   <  1:3354159/93‑1 (MQ=255)

                                                                        cgACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCGGGa                  <  1:3081480/92‑1 (MQ=255)

                                                                        aGACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCAAAAATGGCTGGAAGATTTCTGCCCGTTTCGCgggg                  >  2:1755507/1‑92 (MQ=255)

                                                                         gACGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATGTCTGCCAGAGTCGCggggc                 >  1:4210813/1‑91 (MQ=255)

                                                                          aCGGCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCGGGATc                >  1:9564/1‑93 (MQ=255)

                                                                          aCGGCTACTAAAGGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGAAAGATTTCTGCCAGTTTCGCGGGATc                <  2:4220925/93‑1 (MQ=255)

                                                                            ggCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCGGGATCaa              >  1:3640556/1‑93 (MQ=255)

                                                                            ggCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCGGGATCaa              >  1:2160099/1‑93 (MQ=255)

                                                                             gCTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCGGGATCAAt             >  1:551962/1‑93 (MQ=255)

                                                                              cTACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCGGGATCAATa            >  1:4119729/1‑93 (MQ=255)

                                                                               tACTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCGGGATCAATAc           <  1:3727056/93‑1 (MQ=255)

                                                                                aCTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCGGGATCAATAcc          >  1:555087/1‑93 (MQ=255)

                                                                                 cTGATAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCGGGATCAATACCg         >  1:3693302/1‑93 (MQ=255)

                                                                                    aTAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCGGGATCAATACCGCAg      >  2:3470794/1‑93 (MQ=255)

                                                                                     tAGTCAGCCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCGGGATCAATACCGCAGc     <  2:4497796/93‑1 (MQ=255)

                                                                                      agtcagccCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCGGGATCAATACCGCAGcc    <  1:164762/93‑1 (MQ=255)

                                                                                       gtcagccCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCGGGATCAATACCGCAGCCg   >  1:3474555/1‑93 (MQ=255)

                                                                                        tcagccCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCGGGATCAATACCGCAGCCGc  <  2:2441739/93‑1 (MQ=255)

AAGCGTAAACAAAAACAGCTTCCAACCTCCGGCGTGCTGGTGGCGCTCAGTTCGCCGCCCATCGCCTGGGCCAGACGGCTACTGATAGTCAGTCCCAGCCCGGTGCCGCCGCGTTTGCCGCTTACCTGCACAAATGGCTGGAAGATTTCTGCCAGTTTCGCGGGATCAATACCGCAGCCGC  >  NC_000913/1053423‑1053603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`