| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,138,203 | A→G | Q201Q (CAA→CAG) | flgK → | hook‑filament junction protein 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,138,203 | 0 | A | G | 97.8% | 435.1 / ‑0.2 | 138 | Q201Q (CAA→CAG) | flgK | hook‑filament junction protein 1 |
| Reads supporting (aligned to +/- strand): ref base A (1/2); new base G (57/78); total (58/80) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01 | |||||||||||
Only 100 of 149 total aligned reads displayed.
ACTACGCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAACGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGCCAATGG > NC_000913/1138112‑1138295 | acTACGCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATATGCTGTATAAAc > 1:3676880/1‑93 (MQ=255) tACGCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGcgg > 2:3897857/1‑92 (MQ=255) gCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGAt < 1:2808957/93‑1 (MQ=255) cTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATc > 2:3624488/1‑93 (MQ=255) tAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCa > 2:4504679/1‑93 (MQ=255) tAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCa > 2:4072462/1‑93 (MQ=255) aaaCAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCaa < 2:2208458/93‑1 (MQ=255) aaaCAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCaa < 2:517337/93‑1 (MQ=255) aaCAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAAc < 2:909771/93‑1 (MQ=255) aCAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAAcg > 1:4080844/1‑92 (MQ=255) aCAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACt < 1:1580388/93‑1 (MQ=255) aCAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACt < 1:4197713/93‑1 (MQ=255) aCAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACt > 1:4080845/1‑93 (MQ=255) aCAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACt > 2:403983/1‑93 (MQ=255) cAAATTGCGAGCCTGAACGATCAAAGCTCGCGCCTGGCAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTg < 2:3935826/93‑1 (MQ=255) cAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTg > 1:2812470/1‑93 (MQ=255) aaaTTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTTACCTAACAATCTGCTGGATCAGCGCGATCAACTgg > 2:3617662/1‑93 (MQ=255) aaTTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTggg > 1:2289306/1‑92 (MQ=255) aaTTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGt > 2:2031949/1‑93 (MQ=255) aaTTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGt < 2:3460483/93‑1 (MQ=255) aaTTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGt > 1:86965/1‑93 (MQ=255) aaTTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGt > 2:4487627/1‑93 (MQ=255) aTTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTg > 1:1858171/1‑93 (MQ=255) ttGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGa < 1:4400453/93‑1 (MQ=255) ttGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGa < 2:1187918/93‑1 (MQ=255) tGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAg < 1:4617191/93‑1 (MQ=255) gCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCA‑GGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCg > 2:2945658/1‑93 (MQ=255) cAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGa > 1:2597174/1‑93 (MQ=255) aGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGaa > 2:3434713/1‑93 (MQ=255) aGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGaa < 1:2254693/93‑1 (MQ=255) aGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCA‑GGGCGTCACCTAACAATCTGCTGGATCAACGCGATCAACTGGTGAGCGAAt > 1:1083303/1‑93 (MQ=255) gCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGGGGGAAt > 2:4011069/1‑93 (MQ=255) gCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAAt > 2:2399055/1‑93 (MQ=255) cTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTa > 1:1114100/1‑93 (MQ=255) cGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCa > 2:3753023/1‑93 (MQ=255) gATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAg > 1:664731/1‑93 (MQ=255) gATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAg < 1:1244152/93‑1 (MQ=255) aTCAAATCTCGCGCCTGACAGGCGTGGGGGCATGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATTAACTGGTGAGCGAATTAAACCAGa > 1:4215422/1‑93 (MQ=255) aTCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTAACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGa < 2:2287533/93‑1 (MQ=255) tCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGAt < 1:1631012/93‑1 (MQ=255) cAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGAtt < 1:2966653/93‑1 (MQ=255) tctcGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGAttgttg < 2:2882871/93‑1 (MQ=255) tctcGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGAttgttg < 2:2882872/93‑1 (MQ=255) ctcGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTgg < 1:4297733/93‑1 (MQ=255) tcGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGgt > 2:2455664/1‑93 (MQ=255) tcGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGgt > 2:2421348/1‑93 (MQ=255) tcGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGgt < 1:1142587/93‑1 (MQ=255) gcgcCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGgtgt < 1:2579226/93‑1 (MQ=255) gcgcCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGgtgt < 1:2831582/93‑1 (MQ=255) cgcCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTa < 1:447455/93‑1 (MQ=255) gcgtGACAGGGGTGGGGGCAGGGGCGTAACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAg < 2:2633939/90‑1 (MQ=255) gcCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAg > 1:435703/1‑93 (MQ=255) cTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGag > 1:1394837/1‑92 (MQ=255) cTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGaa < 1:2959858/93‑1 (MQ=255) cTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGaa < 1:2200221/93‑1 (MQ=255) aCAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTc < 2:4428968/93‑1 (MQ=255) aCAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTc > 1:95233/1‑93 (MQ=255) cAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCa > 2:1695786/1‑93 (MQ=255) aGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAg < 1:3414082/93‑1 (MQ=255) aGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAg < 2:4687045/93‑1 (MQ=255) ggCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAACGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGc > 1:4525871/1‑93 (MQ=255) tGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTc > 1:3829836/1‑93 (MQ=255) tGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTc > 1:3829837/1‑93 (MQ=255) gggggCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCa < 1:1108340/93‑1 (MQ=255) gggggCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCa < 2:1532020/93‑1 (MQ=255) gggCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAgg < 1:526660/93‑1 (MQ=255) gCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCCACTGGTGAGCGAATTAAACCCGATTGTTGGTGAAGAAGTCAGCGTTCAGGag > 2:3794293/1‑92 (MQ=255) gCAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGAt < 2:4015259/93‑1 (MQ=255) cAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATg < 2:2451696/93‑1 (MQ=255) cAGGGGCGTCACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATg < 1:956490/93‑1 (MQ=255) cACCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACtt < 2:1421366/93‑1 (MQ=255) cccTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTta < 2:4273360/92‑1 (MQ=255) aCCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTta < 2:4273359/93‑1 (MQ=255) aCCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTta < 2:3110129/93‑1 (MQ=255) aCCTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTta < 1:3681093/93‑1 (MQ=255) aCCTAACAATCTGCGGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTta < 2:924111/93‑1 (MQ=255) ccTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTtat > 1:318623/1‑93 (MQ=255) ccTAACAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTtat > 2:1886747/1‑93 (MQ=255) aaCAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAAc < 2:1383741/93‑1 (MQ=255) aaCAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGATGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAAc > 2:1174633/1‑93 (MQ=255) aCAATCTGCTGGCTCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGCCGGGAGTTATAACa > 2:324097/1‑93 (MQ=255) aCAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACa < 2:905799/93‑1 (MQ=255) cAATCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACAt > 2:890388/1‑93 (MQ=255) aaTCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATc > 1:2435597/1‑93 (MQ=255) aTCTGCTGGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCa < 2:2740396/93‑1 (MQ=255) tgctgGATCAGCGCGATCAACTGGTGAGCGAATTAACCCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGa < 2:2220707/93‑1 (MQ=255) tgctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGa > 2:4043020/1‑93 (MQ=255) tgctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGa < 2:811134/93‑1 (MQ=255) tgctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGa > 2:741724/1‑93 (MQ=255) gctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGAt < 1:3240618/93‑1 (MQ=255) gctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGAt < 1:4394028/93‑1 (MQ=255) ctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATg < 2:4436809/93‑1 (MQ=255) ctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATg < 2:4371049/93‑1 (MQ=255) ctgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATg < 2:2956679/93‑1 (MQ=255) tgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATgg < 1:4429524/93‑1 (MQ=255) tgGATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATgg > 2:2341335/1‑93 (MQ=255) ggATCAGCGCGATCAGCTGGTGAGCTAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGc < 2:168114/93‑1 (MQ=255) ggATCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGc > 1:877499/1‑93 (MQ=255) tCAGCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGCCaa < 2:532920/93‑1 (MQ=255) aCGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGCCAATgg < 2:4102566/93‑1 (MQ=255) | ACTACGCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAACGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGCCAATGG > NC_000913/1138112‑1138295 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |