BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,173,983	C→T	G136R (GGG→AGG)	ycfT ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,173,983	0	C	T	100.0%	421.6 / NA	119	G136R (GGG→AGG)	ycfT	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (50/69); total (50/69)

Only 100 of 120 total aligned reads displayed.

GCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCAC  >  NC_000913/1173893‑1174072

gCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGt                                                                                         <  2:187309/93‑1 (MQ=255)

  aGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGc                                                                                       <  2:2798749/93‑1 (MQ=255)

  aGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGc                                                                                       <  1:1759086/93‑1 (MQ=255)

   gcgcCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCa                                                                                      >  1:1886373/1‑93 (MQ=255)

     gcCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAgg                                                                                    >  1:1107592/1‑93 (MQ=255)

     gcCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAgg                                                                                    >  2:3540153/1‑93 (MQ=255)

      ccAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGa                                                                                   <  1:1967887/93‑1 (MQ=255)

        aGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAAc                                                                                 <  1:4447645/93‑1 (MQ=255)

        aGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAAc                                                                                 <  2:1232798/93‑1 (MQ=255)

         gACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACt                                                                                >  2:4583680/1‑93 (MQ=255)

            ggCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCAc                                                                             <  2:2658434/93‑1 (MQ=255)

            ggCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCAc                                                                             <  1:4516450/93‑1 (MQ=255)

             gCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCAcc                                                                            >  2:2187693/1‑93 (MQ=255)

             gCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCAcc                                                                            >  1:2602112/1‑93 (MQ=255)

             gCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCAcc                                                                            <  2:3860515/93‑1 (MQ=255)

               tAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCgg                                                                          <  2:1800810/93‑1 (MQ=255)

               tAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCgg                                                                          >  2:1043419/1‑93 (MQ=255)

               tAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCgg                                                                          >  1:726958/1‑93 (MQ=255)

               tAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCACGAACTCACCgg                                                                          >  2:2437179/1‑93 (MQ=255)

                 aaaaTTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTg                                                                        <  1:1146321/93‑1 (MQ=255)

                   aaTTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGa                                                                      >  1:1429223/1‑93 (MQ=255)

                    aTTTTACATACCACGATTTAGTCAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTTCAGGAATTCACCGGTGGaa                                                                     >  2:4220400/1‑93 (MQ=255)

                    aTTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGaa                                                                     <  2:2697271/93‑1 (MQ=255)

                    aTTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGaa                                                                     <  1:729860/93‑1 (MQ=255)

                     ttttACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAAt                                                                    >  1:1380420/1‑93 (MQ=255)

                     ttttACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAAt                                                                    <  1:3434552/93‑1 (MQ=255)

                      tttACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATc                                                                   <  1:4629357/93‑1 (MQ=255)

                      tttACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATc                                                                   <  2:860338/93‑1 (MQ=255)

                      tttACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATc                                                                   <  1:3625410/93‑1 (MQ=255)

                      tttACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATc                                                                   <  2:204512/93‑1 (MQ=255)

                       ttACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCg                                                                  >  2:2541569/1‑93 (MQ=255)

                         aCATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGc                                                                <  2:4302848/93‑1 (MQ=255)

                          cATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCa                                                               <  1:4554522/93‑1 (MQ=255)

                           aTACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCAt                                                              <  1:588563/93‑1 (MQ=255)

                            tACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATa                                                             >  2:2758406/1‑93 (MQ=255)

                             aCCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATaa                                                            <  2:4414687/93‑1 (MQ=255)

                             aCCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATaa                                                            <  1:2040864/93‑1 (MQ=255)

                               caagAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGc                                                          <  2:1503350/90‑1 (MQ=255)

                               cACGAAATAGACAATTAACGCATACAGATCCCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGc                                                          <  1:1482300/93‑1 (MQ=255)

                               cACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGc                                                          <  1:3880743/93‑1 (MQ=255)

                               cACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGc                                                          <  1:4358434/93‑1 (MQ=255)

                               cACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGc                                                          <  1:1675245/93‑1 (MQ=255)

                                ccGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCg                                                         <  2:2470632/92‑1 (MQ=255)

                                aCGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCg                                                         >  2:3751813/1‑93 (MQ=255)

                                  gAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGc                                                       <  2:4438845/93‑1 (MQ=255)

                                    aaTAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCAt                                                     <  1:4526259/93‑1 (MQ=255)

                                    aaTAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGAAt                                                     >  1:1214380/1‑93 (MQ=255)

                                     aTAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCAtt                                                    <  1:3471691/93‑1 (MQ=255)

                                     aTAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCAtt                                                    >  1:2717750/1‑93 (MQ=255)

                                       aGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTgg                                                  >  1:1263714/1‑93 (MQ=255)

                                        gACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGa                                                 <  2:3429953/93‑1 (MQ=255)

                                        gACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGa                                                 <  1:3354229/93‑1 (MQ=255)

                                        gACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGa                                                 >  1:2588741/1‑93 (MQ=255)

                                        gACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTAACCGGTGGAATCGGCATAAGCGGCATTGGa                                                 >  1:2588742/1‑93 (MQ=255)

                                         aCAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAg                                                <  2:4478699/93‑1 (MQ=255)

                                         aCAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAg                                                <  2:4479010/93‑1 (MQ=255)

                                           aaTTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCTTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGc                                              <  2:2810077/93‑1 (MQ=255)

                                           aaTTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGc                                              >  1:977593/1‑93 (MQ=255)

                                           aaTTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGc                                              <  1:1844163/93‑1 (MQ=255)

                                           aaTTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGc                                              <  1:3511248/93‑1 (MQ=255)

                                            aTTAACGCATACAGATACCACAAGCTTGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCAGCATAAGAGGGCGTGGAGGCa                                             >  2:731547/1‑93 (MQ=255)

                                              tAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCAtt                                           <  2:3760686/93‑1 (MQ=255)

                                              tAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCAtt                                           >  1:2002378/1‑93 (MQ=255)

                                                aCGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGc                                         <  2:3160698/93‑1 (MQ=255)

                                                aCGCAGACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGc                                         <  1:2077881/93‑1 (MQ=255)

                                                  gCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCtt                                       <  1:3102654/93‑1 (MQ=255)

                                                    aTACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTaa                                     >  1:3539899/1‑93 (MQ=255)

                                                     tACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTaaa                                    >  1:658883/1‑93 (MQ=255)

                                                     tACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTaaa                                    >  2:3259143/1‑93 (MQ=255)

                                                      aCAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAAt                                   >  2:3720769/1‑93 (MQ=255)

                                                      aCAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAAt                                   >  1:3000843/1‑93 (MQ=255)

                                                       cAGATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATc                                  >  1:3592572/1‑93 (MQ=255)

                                                         gATACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATcgc                                <  1:4368332/93‑1 (MQ=255)

                                                           tACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCgcgc                              >  2:3752670/1‑93 (MQ=255)

                                                           tACCACAAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCgcgc                              <  1:1921538/93‑1 (MQ=255)

                                                              cacaAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCa                           <  1:2068729/93‑1 (MQ=255)

                                                              cacaAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCa                           <  1:2247461/93‑1 (MQ=255)

                                                              cacaAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCa                           <  2:734061/93‑1 (MQ=255)

                                                               acaAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAg                          <  1:2538551/93‑1 (MQ=255)

                                                               acaAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAg                          <  1:1461739/93‑1 (MQ=255)

                                                                caAGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAgg                         <  1:4257248/93‑1 (MQ=255)

                                                                  aGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGtc                       >  1:3968843/1‑92 (MQ=255)

                                                                  aGCTGGTGCTGGCGGTGATCATCCTGTGCAGGAACTCACAGGTGGAATCGGAATAAGCGGCATTGGAGGCATTGCTTACATCGAGCTCAGGTg                       >  1:4706282/1‑93 (MQ=255)

                                                                       gTGCTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTgccagc                  >  2:3094182/1‑93 (MQ=255)

                                                                          cTGGCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCAc               <  1:1461637/93‑1 (MQ=255)

                                                                            ggCGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTg             >  2:4422616/1‑93 (MQ=255)

                                                                              cGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGt           <  2:4012796/93‑1 (MQ=255)

                                                                              cGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGt           <  2:872174/93‑1 (MQ=255)

                                                                              cGGTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGt           <  1:3723231/93‑1 (MQ=255)

                                                                               ggTGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGtt          >  1:947265/1‑93 (MQ=255)

                                                                                gTGATCATCCTGTGCAGGAACTCACCCGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTc         <  1:1228808/93‑1 (MQ=255)

                                                                                 tGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCa        <  2:958408/93‑1 (MQ=255)

                                                                                 tGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCa        <  2:345974/93‑1 (MQ=255)

                                                                                 tGATCATCCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCa        <  1:4263422/93‑1 (MQ=255)

                                                                                   atcatcCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAgc      <  1:4412906/93‑1 (MQ=255)

                                                                                      atcCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCa   <  1:2781004/93‑1 (MQ=255)

                                                                                       tcCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCAc  >  1:257286/1‑93 (MQ=255)

                                                                                       tcCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCAc  >  2:2093919/1‑93 (MQ=255)

                                                                                       tcCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCAc  >  2:4294069/1‑93 (MQ=255)

                                                                                       tcCTGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCAc  >  2:3075117/1‑93 (MQ=255)

GCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCAC  >  NC_000913/1173893‑1174072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`