BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,261,945	A→G	R52R (CGT→CGC)	ychB ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,261,945	0	A	G	97.9%	433.0 / ‑0.8	143	R52R (CGT→CGC)	ychB	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (3/0); new base G (92/48); total (95/48)
Fisher's exact test for biased strand distribution p-value = 5.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.16e-01

Only 100 of 145 total aligned reads displayed.

CCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCATC  >  NC_000913/1261855‑1262034

cccGCTGTCTGCCGGAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCg                                                                                         <  2:1644485/93‑1 (MQ=255)

cccGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCg                                                                                         >  1:1486294/1‑93 (MQ=255)

 ccGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGa                                                                                        >  1:95687/1‑93 (MQ=255)

   gCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAat                                                                                      >  2:2294241/1‑93 (MQ=255)

     tGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAatat                                                                                    <  1:2762471/93‑1 (MQ=255)

     tGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAatat                                                                                    >  2:891325/1‑93 (MQ=255)

      gTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATc                                                                                   >  2:2245464/1‑93 (MQ=255)

      gTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATc                                                                                   >  1:745294/1‑93 (MQ=255)

       tCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATcc                                                                                  <  2:3530925/93‑1 (MQ=255)

        cTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATccc                                                                                 >  1:1750911/1‑93 (MQ=255)

        cTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATccc                                                                                 >  1:1596618/1‑93 (MQ=255)

        cTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATccc                                                                                 >  1:2934142/1‑93 (MQ=255)

          gCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCa                                                                               >  2:3166068/1‑93 (MQ=255)

              cAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGt                                                                           >  1:3018516/1‑93 (MQ=255)

                gTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCa                                                                         >  2:4362286/1‑93 (MQ=255)

                 ttttCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCAc                                                                        >  2:915212/1‑93 (MQ=255)

                  tttCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCACCGGGCGTTAACAGGCGAATATCCCCATCGTCAca                                                                       >  1:1047607/1‑92 (MQ=255)

                     catcaACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAg                                                                    <  1:354470/93‑1 (MQ=255)

                     catcaACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAg                                                                    >  1:2957107/1‑93 (MQ=255)

                      atcaACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGc                                                                   <  2:2170610/93‑1 (MQ=255)

                       tcaACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCt                                                                  >  2:3300105/1‑93 (MQ=255)

                         aacaaTCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCa                                                                >  2:2705578/1‑93 (MQ=255)

                          acaaTCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCaa                                                               >  2:1954299/1‑93 (MQ=255)

                          acaaTCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCaa                                                               <  1:4019074/93‑1 (MQ=255)

                           caaTCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAAt                                                              <  1:794971/93‑1 (MQ=255)

                            aaTCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAAtc                                                             >  1:1052717/1‑92 (MQ=255)

                             aTCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGc                                                            >  2:1649187/1‑93 (MQ=255)

                             aTCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGc                                                            >  2:317299/1‑93 (MQ=255)

                              tCGCGCTGCGCGAACGATAAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATTCCCATCGTCACGAAGCTCAATGCt                                                           >  2:572829/1‑93 (MQ=255)

                                gcgcTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGa                                                         <  2:2298510/93‑1 (MQ=255)

                                  gcTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATg                                                       <  2:1015182/93‑1 (MQ=255)

                                  gcTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATg                                                       >  1:1781846/1‑93 (MQ=255)

                                   cTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATgg                                                      >  2:1629054/1‑93 (MQ=255)

                                     gcgcGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGgtg                                                    >  2:1758774/1‑93 (MQ=255)

                                       gcgAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGgtgtg                                                  >  2:2475627/1‑92 (MQ=255)

                                       gcgAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTc                                                  >  2:2325423/1‑93 (MQ=255)

                                         gAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGc                                                >  1:4515507/1‑93 (MQ=255)

                                         gAACGAGCTGGTGATCTTCATGTTCTTCGCCTTCAACGGGCGTTAACAGGCGAACAACCCCATCGTCACGAAGCTCAATGCCGACGGTGTCGc                                                >  2:4204069/1‑93 (MQ=255)

                                          aaCGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGcc                                               >  2:3136797/1‑93 (MQ=255)

                                          aaCGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACCAAGCTCAATGCTGATGGTGTCGcc                                               >  2:746491/1‑93 (MQ=255)

                                          aaCGATCAGGTTATCTTCATGTTCAACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGcc                                               <  1:2997750/93‑1 (MQ=255)

                                           aCGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCg                                              <  1:3074261/93‑1 (MQ=255)

                                              aTCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTaa                                           >  1:4134196/1‑93 (MQ=255)

                                              aTCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTaa                                           <  2:3628918/93‑1 (MQ=255)

                                               tCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAAt                                          >  2:1266793/1‑93 (MQ=255)

                                                  ggTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCaa                                       >  1:1708421/1‑93 (MQ=255)

                                                  ggTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCaa                                       <  1:379444/93‑1 (MQ=255)

                                                      aTCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGaaa                                   >  2:1493920/1‑93 (MQ=255)

                                                       tCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAAc                                  >  1:3407770/1‑93 (MQ=255)

                                                        cTTCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACt                                 >  2:941957/1‑93 (MQ=255)

                                                         ttCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTg                                >  2:1285470/1‑93 (MQ=255)

                                                         ttCATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTg                                >  1:4598325/1‑93 (MQ=255)

                                                           cATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGACACTGaa                              >  1:1954819/1‑93 (MQ=255)

                                                           cATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGaa                              <  2:456286/93‑1 (MQ=255)

                                                           cATGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGaa                              >  2:1586032/1‑93 (MQ=255)

                                                            aTGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACTAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGaaa                             >  2:812179/1‑93 (MQ=255)

                                                            aTGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGaaa                             >  1:3180123/1‑93 (MQ=255)

                                                            aTGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGaaa                             >  1:495669/1‑93 (MQ=255)

                                                            aTGTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGaaa                             <  1:2148971/93‑1 (MQ=255)

                                                              gTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACa                           >  2:901088/1‑93 (MQ=255)

                                                              gTTCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACa                           <  2:3468662/93‑1 (MQ=255)

                                                               ttCCACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAg                          >  2:2455808/1‑93 (MQ=255)

                                                                 ccACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCg                        >  1:3857278/1‑93 (MQ=255)

                                                                 ccACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCg                        <  2:288421/93‑1 (MQ=255)

                                                                  cACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGt                       >  2:103014/1‑93 (MQ=255)

                                                                  cACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGt                       >  1:2156016/1‑93 (MQ=255)

                                                                  cACGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGt                       >  1:3110345/1‑93 (MQ=255)

                                                                    cGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGttt                     >  2:4036614/1‑93 (MQ=255)

                                                                    cGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGttt                     <  1:780653/93‑1 (MQ=255)

                                                                    cGCCTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGttt                     <  2:3006211/93‑1 (MQ=255)

                                                                      ccTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGc                   >  2:3761471/1‑93 (MQ=255)

                                                                      ccTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGc                   <  1:1031291/93‑1 (MQ=255)

                                                                       cTTCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCa                  <  1:2533299/93‑1 (MQ=255)

                                                                        ttCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAg                 >  1:109273/1‑93 (MQ=255)

                                                                         tCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGc                <  1:895641/93‑1 (MQ=255)

                                                                         tCAACGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGAGTTTGCacg                >  1:2715960/1‑91 (MQ=255)

                                                                           aaCGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCgt              >  1:4651012/1‑93 (MQ=255)

                                                                           aaCGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCgt              >  2:4250361/1‑93 (MQ=255)

                                                                           aaCGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAAATGAAACAGCGTTTGCAGCgt              >  2:1348725/1‑93 (MQ=255)

                                                                           aaCGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGCAATCAAGAAACTGAAACAGCGTTTGCAGCgt              >  1:3299757/1‑93 (MQ=255)

                                                                            aCGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCgtg             <  1:60715/93‑1 (MQ=255)

                                                                             cGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCgtgt            <  1:3907835/93‑1 (MQ=255)

                                                                             cGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCgtgt            <  1:1207536/93‑1 (MQ=255)

                                                                             cGGGCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCgtgt            <  1:135691/93‑1 (MQ=255)

                                                                              gggCGTTAACAGGCGAATATCTCCATCGTCATGAAGCTCAATGCTGATGGGGTCGCCGTTATCAAGAAACTGAATCTGCGTTTGCAGCGtctg           >  1:2608434/1‑93 (MQ=255)

                                                                              gggCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGtgtg           <  2:406963/93‑1 (MQ=255)

                                                                               ggCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTgg          >  2:3740518/1‑93 (MQ=255)

                                                                               ggCGTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTgg          <  2:3582744/93‑1 (MQ=255)

                                                                                  gTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTaa       <  1:4237203/93‑1 (MQ=255)

                                                                                  gTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTaa       <  1:2953308/93‑1 (MQ=255)

                                                                                  gTTAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTaa       >  2:2038891/1‑93 (MQ=255)

                                                                                   ttAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAAc      >  1:3395081/1‑93 (MQ=255)

                                                                                   ttAACAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAAc      >  2:3431493/1‑93 (MQ=255)

                                                                                   ttAACAGACGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAAc      >  2:3322558/1‑93 (MQ=255)

                                                                                     aaCAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGAGTGTGGTAACCa    >  1:2096468/1‑93 (MQ=255)

                                                                                      aCAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCac   >  1:11407/1‑92 (MQ=255)

                                                                                      aCAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCAt   >  1:679587/1‑93 (MQ=255)

                                                                                      aCAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCAt   >  2:2135645/1‑93 (MQ=255)

                                                                                       cAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCATc  >  2:3647980/1‑93 (MQ=255)

                                                                                       cAGGCGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCATc  >  1:660552/1‑93 (MQ=255)

CCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCGCCGTAATCAAGAAACTGAAACAGCGTTTGCAGCGTGTGGTAACCATC  >  NC_000913/1261855‑1262034

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`