BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,384,449	G→A	T305T (ACG→ACA)	ycjF →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,384,449	0	G	A	97.1%	484.0 / 0.3	141	T305T (ACG→ACA)	ycjF	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (1/3); new base A (79/57); total (81/60)
Fisher's exact test for biased strand distribution p-value = 3.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.45e-01

Only 100 of 143 total aligned reads displayed.

GCGCGAAGTGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCCGTCGTCA  >  NC_000913/1384359‑1384538

gcgcGAAGTGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGc                                                                                         <  2:4549781/93‑1 (MQ=255)

  gcgAAGTGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCAc                                                                                       <  1:884097/93‑1 (MQ=255)

    gAAGTGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGTACTTCTGACAGCACGa                                                                                     >  2:612591/1‑93 (MQ=255)

    gAAGTGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGa                                                                                     >  2:3898279/1‑93 (MQ=255)

    gAAGTGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTATGACAGCACgc                                                                                     >  2:3618714/1‑92 (MQ=255)

      aGTGCGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACt                                                                                   <  2:4087503/93‑1 (MQ=255)

        tGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCg                                                                                 <  1:4018996/93‑1 (MQ=255)

        tGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCg                                                                                 >  1:3473148/1‑93 (MQ=255)

         ggggATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCgg                                                                                <  2:1547247/93‑1 (MQ=255)

          gggATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCggg                                                                               >  2:3756154/1‑93 (MQ=255)

          gggATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCggg                                                                               >  1:2124238/1‑93 (MQ=255)

              tGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCCCTACTCGGGATTa                                                                           >  1:3951472/1‑93 (MQ=255)

               ggACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTaa                                                                          <  1:126289/93‑1 (MQ=255)

               ggACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTaa                                                                          <  2:2980487/93‑1 (MQ=255)

                gACTGGATTTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTaaa                                                                         <  2:4050248/93‑1 (MQ=255)

                gACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTaaa                                                                         <  1:587671/93‑1 (MQ=255)

                gACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTaaa                                                                         >  1:3974331/1‑93 (MQ=255)

                gACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTaaa                                                                         <  1:1815662/93‑1 (MQ=255)

                 aCTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAg                                                                        >  2:2240194/1‑93 (MQ=255)

                  cTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGc                                                                       <  1:3224732/93‑1 (MQ=255)

                  cTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGc                                                                       >  2:2711031/1‑93 (MQ=255)

                   tGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCt                                                                      >  1:2253396/1‑93 (MQ=255)

                    ggATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTa                                                                     <  1:4596906/93‑1 (MQ=255)

                    ggATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTa                                                                     <  2:588233/93‑1 (MQ=255)

                     gATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTAt                                                                    >  2:3723199/1‑93 (MQ=255)

                      aTGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATg                                                                   <  2:4317181/93‑1 (MQ=255)

                      aTGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATg                                                                   <  1:4248765/93‑1 (MQ=255)

                       tGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATgg                                                                  >  1:599269/1‑93 (MQ=255)

                       tGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATgg                                                                  <  2:2880509/93‑1 (MQ=255)

                          cGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGATTAAAGCTATGGAGc                                                               <  2:3301354/93‑1 (MQ=255)

                           gCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCt                                                              <  2:1610570/93‑1 (MQ=255)

                           gCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCt                                                              <  1:2981316/93‑1 (MQ=255)

                            cAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGGTTAAAGCTATGGAGCtt                                                             >  1:1438399/1‑93 (MQ=255)

                             aaGATCTCGCTGCTCGTTTGTCTGCCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGATTAAAGCTATGGAGCttt                                                            <  1:4518437/93‑1 (MQ=255)

                             aaGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCttt                                                            >  1:927543/1‑93 (MQ=255)

                             aaGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCttt                                                            <  2:3689890/93‑1 (MQ=255)

                              aGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTg                                                           >  2:4176922/1‑93 (MQ=255)

                              aGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTg                                                           >  1:40747/1‑93 (MQ=255)

                               gATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTgc                                                          <  1:3773173/93‑1 (MQ=255)

                               gATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTgc                                                          >  2:3890714/1‑93 (MQ=255)

                                aTCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTgcc                                                         >  1:2503606/1‑93 (MQ=255)

                                    cGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGccgccc                                                     <  2:828113/93‑1 (MQ=255)

                                     gctgctCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGCTTAAAGCTATGGAGCTTTGccgcccg                                                    >  2:1012262/1‑93 (MQ=255)

                                     gctgctCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGccgcccg                                                    >  2:2814039/1‑93 (MQ=255)

                                     gctgctCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGccgcccg                                                    >  1:1844982/1‑93 (MQ=255)

                                       tgctCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCt                                                  >  2:1423112/1‑93 (MQ=255)

                                       tgctCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCt                                                  >  1:4675041/1‑93 (MQ=255)

                                       tgctCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCt                                                  <  1:2995912/93‑1 (MQ=255)

                                       tgctCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCt                                                  >  1:3525905/1‑93 (MQ=255)

                                        gctCGTTTGTCTACCCGCGCAGCTCAGGGTATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTg                                                 <  2:373249/93‑1 (MQ=255)

                                        gctCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTg                                                 >  1:4741479/1‑93 (MQ=255)

                                            gTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGt                                             <  2:2115912/93‑1 (MQ=255)

                                             tttGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTg                                            >  1:2572325/1‑93 (MQ=255)

                                             tttGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTg                                            <  1:1468111/93‑1 (MQ=255)

                                              ttGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTgg                                           >  2:3407727/1‑93 (MQ=255)

                                              ttGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTgg                                           >  1:1689302/1‑93 (MQ=255)

                                               tGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGa                                          <  1:2615638/93‑1 (MQ=255)

                                                gTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGAt                                         >  1:2438276/1‑93 (MQ=255)

                                                 tCTACCCGCGCAGCGCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGAtt                                        <  1:3572765/93‑1 (MQ=255)

                                                   tACCCGCGCAGCTCAGGGGATTTGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGa                                      <  2:1074569/93‑1 (MQ=255)

                                                   tACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGa                                      >  2:893735/1‑93 (MQ=255)

                                                       cgcgCAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGAt                                  >  2:1897224/1‑93 (MQ=255)

                                                        gcgcAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATg                                 >  2:1018530/1‑93 (MQ=255)

                                                         cgcAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGa                                >  2:493909/1‑93 (MQ=255)

                                                         cgcAGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGa                                >  1:4528160/1‑93 (MQ=255)

                                                            aGCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACaa                             >  2:4630948/1‑93 (MQ=255)

                                                             gCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGGCGATGACaaa                            >  2:3876383/1‑93 (MQ=255)

                                                             gCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACaaa                            >  1:221231/1‑93 (MQ=255)

                                                             gCTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCGATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACaaa                            <  1:3693945/93‑1 (MQ=255)

                                                              cTCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAc                           <  1:3288547/93‑1 (MQ=255)

                                                               tCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGGCCGCTGCCGTGGATTGACGATGACAAAcc                          >  1:2721489/1‑93 (MQ=255)

                                                               tCAGGGGATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcc                          >  1:403295/1‑93 (MQ=255)

                                                                  ggggATTGGTGCAGGACTTCTGACCGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcctcc                       >  1:3088709/1‑92 (MQ=255)

                                                                  ggggATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcctcg                       >  2:3048811/1‑93 (MQ=255)

                                                                     gATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcctcgcct                    >  1:3337460/1‑93 (MQ=255)

                                                                     gATTGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcctcgcct                    >  2:1104948/1‑93 (MQ=255)

                                                                       ttGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcctcgcctcg                  >  1:1166469/1‑93 (MQ=255)

                                                                       ttGGTGCAGGACTTCTGACAGCACGACCCGGGAGTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAAcctcgcctcg                  <  1:4569308/93‑1 (MQ=255)

                                                                        tGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCgg                 >  2:3052595/1‑93 (MQ=255)

                                                                        tGGTGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCgg                 <  1:2807335/93‑1 (MQ=255)

                                                                           tGCAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGa              <  2:1141830/93‑1 (MQ=255)

                                                                             cAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGAtt            >  2:3407249/1‑93 (MQ=255)

                                                                             cAGGACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGAtt            <  1:8429/93‑1 (MQ=255)

                                                                               ggACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTc          >  1:1300756/1‑93 (MQ=255)

                                                                               ggACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTc          <  2:812886/93‑1 (MQ=255)

                                                                                gACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGCTTGACGATGACAAACCTCGCCTCTGGGATTTcc         >  1:1962201/1‑93 (MQ=255)

                                                                                gACTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTcc         >  2:162126/1‑93 (MQ=255)

                                                                                  cTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCcgt       <  1:3362056/93‑1 (MQ=255)

                                                                                  cTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCcgt       >  2:407680/1‑93 (MQ=255)

                                                                                  cTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCcgt       >  1:4192880/1‑93 (MQ=255)

                                                                                  cTTCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCcgt       >  1:2299054/1‑93 (MQ=255)

                                                                                   ttCTGACAGCACGACTCGGGATTTAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCcgtc      >  2:2722095/1‑93 (MQ=255)

                                                                                   ttCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAACCCTCGCCTCGGGGATTTCcgtc      <  2:1079932/93‑1 (MQ=255)

                                                                                   ttCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCcgtc      >  2:866702/1‑93 (MQ=255)

                                                                                   ttCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCcgtc      >  2:1142548/1‑93 (MQ=255)

                                                                                   ttCTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGCGGATTTCcgtc      >  1:2452137/1‑93 (MQ=255)

                                                                                     cTGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCcgtcgt    >  2:3941961/1‑93 (MQ=255)

                                                                                      tGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCCgtcgtc   <  2:3474068/93‑1 (MQ=255)

                                                                                      tGACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCCgtcgtc   <  1:1684803/93‑1 (MQ=255)

                                                                                       gACAGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCcgtcgcga  >  1:3684494/1‑90 (MQ=255)

GCGCGAAGTGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCCGTCGTCA  >  NC_000913/1384359‑1384538

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`