BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,385,769	T→C	N342N (AAT→AAC)	tyrR →	TyrR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,385,769	0	T	C	100.0%	536.6 / NA	163	N342N (AAT→AAC)	tyrR	TyrR
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (65/98); total (65/98)

Only 100 of 167 total aligned reads displayed.

GCGTTTCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAATCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTACGTGA  >  NC_000913/1385679‑1385858

gCGTTTCCTTAATGATGTCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTCCGCAGAAGAACCt                                                                                         <  2:2499047/93‑1 (MQ=255)

 cGTTTCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTg                                                                                        <  2:903145/93‑1 (MQ=255)

 cGTTTCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTg                                                                                        <  1:2672592/93‑1 (MQ=255)

 cGTTTCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTg                                                                                        <  2:364118/93‑1 (MQ=255)

   tttCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCGTGAGGGGCAGGTCGATGTGCGGGGGATTTGCGCTACGCAGAAGAACCTGGt                                                                                      >  1:2058774/1‑93 (MQ=255)

   tttCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGt                                                                                      <  1:1437397/93‑1 (MQ=255)

   tttCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGt                                                                                      <  1:1333691/93‑1 (MQ=255)

   tttCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGt                                                                                      >  1:4697461/1‑93 (MQ=255)

     tCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCg                                                                                    >  1:3135065/1‑93 (MQ=255)

       cTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGaa                                                                                  >  2:2949167/1‑93 (MQ=255)

       cTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGaa                                                                                  >  2:1102783/1‑93 (MQ=255)

       cTTAATGATGGCACTTTACGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGaa                                                                                  <  2:4209975/93‑1 (MQ=255)

        ttAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAAc                                                                                 <  2:1763254/93‑1 (MQ=255)

        ttAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAAc                                                                                 >  1:941764/1‑93 (MQ=255)

         tAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACt                                                                                <  2:3872700/93‑1 (MQ=255)

         tAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACt                                                                                <  1:2922136/93‑1 (MQ=255)

          aaTGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTg                                                                               >  2:4111229/1‑93 (MQ=255)

           atgatgGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTgg                                                                              <  2:3348419/93‑1 (MQ=255)

            tgatgGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTggg                                                                             >  1:997838/1‑92 (MQ=255)

            tgatgGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGt                                                                             <  2:3800771/93‑1 (MQ=255)

            tgatgGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGt                                                                             <  2:2148345/93‑1 (MQ=255)

             gatgGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTg                                                                            >  1:2668543/1‑93 (MQ=255)

             gatgGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTg                                                                            >  2:4990/1‑93 (MQ=255)

              atgGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGc                                                                           <  1:361483/93‑1 (MQ=255)

                ggCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCaa                                                                         >  1:4688788/1‑93 (MQ=255)

                ggCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCaa                                                                         >  2:1418028/1‑93 (MQ=255)

                  cACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCaaaa                                                                       >  2:2344660/1‑93 (MQ=255)

                   aCTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCaaaaa                                                                      >  2:3310064/1‑93 (MQ=255)

                   aCTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCaaaaa                                                                      <  2:1902804/93‑1 (MQ=255)

                   aCTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCaaaaa                                                                      <  2:2848489/93‑1 (MQ=255)

                     tttCCGTCGGGTTGGCGAAGACCGTGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAgg                                                                    <  1:1085376/93‑1 (MQ=255)

                        ccGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCAt                                                                 <  2:3989070/93‑1 (MQ=255)

                          gTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGt                                                               <  2:449991/93‑1 (MQ=255)

                          gTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGt                                                               >  2:1435089/1‑93 (MQ=255)

                           tCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGtt                                                              <  2:2202095/93‑1 (MQ=255)

                           tCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGtt                                                              <  2:1330655/93‑1 (MQ=255)

                           tCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGtt                                                              >  2:3486001/1‑93 (MQ=255)

                           tCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGtt                                                              <  1:2484630/93‑1 (MQ=255)

                           gcGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGtt                                                              <  2:3023110/92‑1 (MQ=255)

                             gggTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGACCCTGGTCGAACTGGTGCAAAAAGGCATGTTcc                                                            <  1:479103/93‑1 (MQ=255)

                             gggTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTcc                                                            <  2:4363224/93‑1 (MQ=255)

                             gggTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTcc                                                            >  2:3950631/1‑93 (MQ=255)

                               gTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGGGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGGATGTTCCGt                                                          >  2:27368/1‑93 (MQ=255)

                                  ggCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGaa                                                       <  1:1918967/93‑1 (MQ=255)

                                  ggCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGaa                                                       <  1:3301548/93‑1 (MQ=255)

                                   gCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAg                                                      >  1:1504212/1‑93 (MQ=255)

                                    cGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGa                                                     <  2:274764/93‑1 (MQ=255)

                                    cGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTACGTGAAGa                                                     <  1:295016/93‑1 (MQ=255)

                                      aaGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGAtc                                                   <  1:1812624/93‑1 (MQ=255)

                                      aaGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGAtc                                                   <  1:3054354/93‑1 (MQ=255)

                                      aaGACCATGAGGTGCATGTCGATGTGCGGGGGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGCAGAtc                                                   >  2:3296512/1‑93 (MQ=255)

                                        gACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGAtctc                                                 <  1:1527455/93‑1 (MQ=255)

                                        gACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGAtctc                                                 <  2:3605300/93‑1 (MQ=255)

                                        gACCATGAGGTGCATGACGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGAtctc                                                 <  1:4226407/93‑1 (MQ=255)

                                         aCCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATctct                                                <  2:1746493/93‑1 (MQ=255)

                                          ccATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCta                                               <  1:4735888/93‑1 (MQ=255)

                                           cATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCtat                                              >  2:2506022/1‑93 (MQ=255)

                                           cATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATATCtat                                              >  1:2840816/1‑93 (MQ=255)

                                            aTGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCtatt                                             <  1:191244/93‑1 (MQ=255)

                                            aTGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCtatt                                             <  1:932976/93‑1 (MQ=255)

                                            aTGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCtatt                                             <  1:419089/93‑1 (MQ=255)

                                             tGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCtatta                                            <  2:54831/93‑1 (MQ=255)

                                               aGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATc                                          <  1:3310225/93‑1 (MQ=255)

                                               aGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATc                                          >  1:2579866/1‑93 (MQ=255)

                                                ggTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCg                                         >  1:221006/1‑93 (MQ=255)

                                                  tGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGtt                                       >  1:4382452/1‑92 (MQ=255)

                                                  tGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTc                                       <  1:4014729/93‑1 (MQ=255)

                                                   gCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCt                                      <  1:1379488/93‑1 (MQ=255)

                                                   gCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCt                                      <  2:1833063/93‑1 (MQ=255)

                                                   gCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCt                                      <  1:1751818/93‑1 (MQ=255)

                                                   gCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCt                                      >  2:2237354/1‑93 (MQ=255)

                                                    cATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTg                                     <  1:521953/93‑1 (MQ=255)

                                                     aTGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGa                                    >  1:3817300/1‑93 (MQ=255)

                                                      tGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGaa                                   >  1:3829545/1‑93 (MQ=255)

                                                       gTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAAc                                  <  2:3260581/93‑1 (MQ=255)

                                                       gTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAAc                                  <  1:2411324/93‑1 (MQ=255)

                                                           aTGTGCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACgtgt                              >  2:2639257/1‑93 (MQ=255)

                                                           aTGTGCGGGTGATTTGCGCTACGAAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACgtgt                              <  2:2623724/93‑1 (MQ=255)

                                                             gtgCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTg                            <  2:751647/93‑1 (MQ=255)

                                                               gCGGGTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGAc                          <  1:1603654/93‑1 (MQ=255)

                                                                 ggggGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGc                        >  2:2823781/1‑93 (MQ=255)

                                                                 gggTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGc                        <  1:419372/93‑1 (MQ=255)

                                                                 gggTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGc                        >  1:3822994/1‑93 (MQ=255)

                                                                  ggTGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCt                       <  2:1662358/93‑1 (MQ=255)

                                                                    tGATTTGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCa                     >  1:1175733/1‑93 (MQ=255)

                                                                       tttGCGCTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATc                  >  2:3116259/1‑93 (MQ=255)

                                                                          tcgcTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTgc               <  1:1710700/92‑1 (MQ=255)

                                                                           cgcTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTgcc              >  2:1085186/1‑93 (MQ=255)

                                                                           cgcTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTgcc              <  2:2386433/93‑1 (MQ=255)

                                                                           cgcTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTgcc              >  1:399338/1‑93 (MQ=255)

                                                                            gcTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTgccg             >  2:2514871/1‑93 (MQ=255)

                                                                            gcTACGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTgccg             <  2:2054838/93‑1 (MQ=255)

                                                                                cGCAGAAGAACCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCcgccgc         <  1:2304059/93‑1 (MQ=255)

                                                                                    gaagaaCCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTACg     >  1:1236165/1‑93 (MQ=255)

                                                                                     aagaaCCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTACGt    >  1:3119724/1‑93 (MQ=255)

                                                                                     aagaaCCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTACGt    <  2:1983296/93‑1 (MQ=255)

                                                                                      agaaCCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTACGTg   >  1:2164426/1‑93 (MQ=255)

                                                                                      agaaCCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTACGTg   >  1:3117561/1‑93 (MQ=255)

                                                                                       gaaCCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTACGTGa  <  2:480377/93‑1 (MQ=255)

                                                                                       gaaCCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTACGTGa  >  1:807214/1‑93 (MQ=255)

GCGTTTCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAATCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTACGTGA  >  NC_000913/1385679‑1385858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`