Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,476,839 T→C V197A (GTC→GCC)  b1409 → putative phosphatidate cytidiltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,476,8390TC98.4% 395.7 / ‑2.9 128V197A (GTC→GCC) b1409putative phosphatidate cytidiltransferase
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (71/55);  total (72/56)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.98e-01

Only 100 of 133 total aligned reads displayed.

CGTTACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGTCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGTTAC  >  NC_000913/1476749‑1476928
                                                                                          |                                                                                         
cgTTACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGccc                                                                                         <  1:448490/93‑1 (MQ=255)
 gTTACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGcccc                                                                                        >  1:1851742/1‑93 (MQ=255)
 gTTACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGcccc                                                                                        >  2:3583169/1‑93 (MQ=255)
    aCTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTaa                                                                                     >  2:1877840/1‑93 (MQ=255)
      tGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAg                                                                                   >  1:4658436/1‑93 (MQ=255)
      tGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAg                                                                                   >  2:3940679/1‑93 (MQ=255)
      tGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAg                                                                                   >  1:3117625/1‑93 (MQ=255)
       ggTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGt                                                                                  >  1:827496/1‑93 (MQ=255)
       ggTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGt                                                                                  >  1:854583/1‑93 (MQ=255)
        gtgtTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTc                                                                                 <  1:4280798/93‑1 (MQ=255)
         tgtTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCa                                                                                <  1:969176/93‑1 (MQ=255)
         tgtTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCa                                                                                <  2:4677984/93‑1 (MQ=255)
         tgtTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCa                                                                                >  1:2123291/1‑93 (MQ=255)
          gtTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGTCCCTAAAGTCAg                                                                               >  2:4032233/1‑93 (MQ=255)
          gtTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAg                                                                               <  1:4538023/93‑1 (MQ=255)
          gtTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAg                                                                               >  2:1158901/1‑93 (MQ=255)
          gtTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAg                                                                               >  1:1340032/1‑93 (MQ=255)
           ttATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGc                                                                              >  2:2870148/1‑93 (MQ=255)
             aTTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGccc                                                                            <  2:4560157/93‑1 (MQ=255)
             aTTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGccc                                                                            <  1:3522259/93‑1 (MQ=255)
             aTTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGAGGCCCCTAAAGTCAGccc                                                                            >  2:814044/1‑93 (MQ=255)
              tttCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCg                                                                           >  2:36349/1‑93 (MQ=255)
               ttCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCgg                                                                          <  2:1908440/93‑1 (MQ=255)
                  ttttGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGaa                                                                       >  2:2339187/1‑93 (MQ=255)
                   tttGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGaaa                                                                      <  1:534991/93‑1 (MQ=255)
                     tGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGaaaaa                                                                    <  1:4694995/93‑1 (MQ=255)
                          ttAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTg                                                               >  1:375749/1‑93 (MQ=255)
                          ttAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTg                                                               >  1:4110172/1‑93 (MQ=255)
                             aCCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGaa                                                            >  1:3438127/1‑93 (MQ=255)
                              ccGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAg                                                           <  2:2288660/93‑1 (MQ=255)
                              ccGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAg                                                           >  1:1625855/1‑93 (MQ=255)
                               cGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAgg                                                          <  2:774283/93‑1 (MQ=255)
                               cGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAgg                                                          <  1:4628636/93‑1 (MQ=255)
                               cGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCACTAAAGTCAGCCCGGGAAAAACATTGGaacg                                                          >  1:4185223/1‑91 (MQ=255)
                               cGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCACTAAAGTCAGCCCGGGAAAAACATTGGAAgg                                                          >  1:4185225/1‑93 (MQ=255)
                                 aGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTc                                                        >  1:1223760/1‑93 (MQ=255)
                                  gTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGAGGCCCCTAAAGTAAGCCCGGGAAAAACATTGGAAGGTCt                                                       >  2:2648154/1‑93 (MQ=255)
                                    cAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGa                                                     <  1:4658718/93‑1 (MQ=255)
                                    cAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGa                                                     <  2:3055931/93‑1 (MQ=255)
                                    cAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGa                                                     <  2:1082602/93‑1 (MQ=255)
                                     aaaCGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGAt                                                    >  1:3679564/1‑93 (MQ=255)
                                     aaaCGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGAt                                                    <  1:1988133/93‑1 (MQ=255)
                                      aaCGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATg                                                   >  1:618416/1‑93 (MQ=255)
                                      aaCGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATg                                                   >  1:4428105/1‑93 (MQ=255)
                                        cGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATggg                                                 <  2:2755783/93‑1 (MQ=255)
                                        cGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATggg                                                 >  1:87400/1‑93 (MQ=255)
                                         gATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGTGCTGATGggc                                                >  1:3317487/1‑93 (MQ=255)
                                         gATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggc                                                >  1:1121429/1‑93 (MQ=255)
                                          atatTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGTTCTGATGggcg                                               >  1:4394183/1‑93 (MQ=255)
                                          atatTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggcg                                               >  2:814856/1‑93 (MQ=255)
                                          atatTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggcg                                               >  2:297659/1‑93 (MQ=255)
                                          atatTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggcg                                               <  2:489396/93‑1 (MQ=255)
                                            atTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggcggc                                             >  1:215497/1‑93 (MQ=255)
                                            atTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggcggc                                             <  2:4449153/93‑1 (MQ=255)
                                            atTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGggcggc                                             >  2:2574125/1‑93 (MQ=255)
                                             ttGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGTCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGgcggcg                                            <  2:1572126/93‑1 (MQ=255)
                                             ttGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGgcggcg                                            >  2:152919/1‑93 (MQ=255)
                                             ttGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGgcggcg                                            >  1:722890/1‑93 (MQ=255)
                                                 acaGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGtcat                                        >  2:288030/1‑93 (MQ=255)
                                                 acaGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCCGATGGGCGGCGtcat                                        <  1:3257472/93‑1 (MQ=255)
                                                  caGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGtcatc                                       <  2:1964813/93‑1 (MQ=255)
                                                    gTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCAc                                     >  2:37764/1‑93 (MQ=255)
                                                       tttATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACcat                                  >  2:1257111/1‑93 (MQ=255)
                                                       tttATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACcat                                  >  1:2622437/1‑93 (MQ=255)
                                                        ttATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACcatc                                 <  1:1869214/93‑1 (MQ=255)
                                                        ttATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACcatc                                 <  1:860499/93‑1 (MQ=255)
                                                        ttATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACcatc                                 <  2:4486843/93‑1 (MQ=255)
                                                         tATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACcatca                                <  2:2667825/93‑1 (MQ=255)
                                                          aTGGGGAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACcatcat                               <  2:61951/93‑1 (MQ=255)
                                                             gggAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGAt                            <  1:1849623/93‑1 (MQ=255)
                                                              ggAAAATCCTGCGGCAGAAGAGAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGAtt                           >  2:4659296/1‑93 (MQ=255)
                                                              ggAAAATCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGAtt                           <  2:161166/93‑1 (MQ=255)
                                                               gAAAATACTGCGGCAGAAGGAAAGAGGCCCCTAAAGCCAGCCCGGGAAAAACAATGCAAGGAATGAAGAGCCGCGTCATCAGAATCATGATTg                          >  2:2510784/1‑93 (MQ=255)
                                                                aaaaTCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGc                         <  2:4732395/93‑1 (MQ=255)
                                                                aaaaTCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGc                         <  2:1888004/93‑1 (MQ=255)
                                                                aaaaTCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGc                         <  1:3475330/93‑1 (MQ=255)
                                                                    tCCTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCa                     >  2:2404527/1‑93 (MQ=255)
                                                                     ccTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCAc                    <  2:544718/93‑1 (MQ=255)
                                                                      cTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACt                   <  1:1586615/93‑1 (MQ=255)
                                                                      cTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACt                   >  1:153708/1‑93 (MQ=255)
                                                                      cTGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGACTGATGGGCGGCGTCATCACCATCATGATTGCGTCACt                   >  2:3631641/1‑93 (MQ=255)
                                                                       tGCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTg                  >  2:4024611/1‑93 (MQ=255)
                                                                        gCGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGa                 >  1:3942788/1‑93 (MQ=255)
                                                                         cGGCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGAt                <  2:358340/93‑1 (MQ=255)
                                                                           gCAGAAGAAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTa              >  2:2984729/1‑93 (MQ=255)
                                                                             agaagaAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATc            >  2:193097/1‑93 (MQ=255)
                                                                             agaagaAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATc            <  2:3215671/93‑1 (MQ=255)
                                                                             agaagaAAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATc            >  2:193098/1‑93 (MQ=255)
                                                                              gaagaaAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCg           >  2:324644/1‑93 (MQ=255)
                                                                              gaagaaAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCg           >  1:230232/1‑93 (MQ=255)
                                                                              gaagaaAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCg           >  2:3615250/1‑93 (MQ=255)
                                                                               aagaaAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATggg          >  2:4007796/1‑93 (MQ=255)
                                                                                agaaAAATGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGa         <  1:1384920/93‑1 (MQ=255)
                                                                                 gaaAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGAc        <  2:3510950/93‑1 (MQ=255)
                                                                                 gaaAAGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGAc        >  2:3305798/1‑93 (MQ=255)
                                                                                  aaaaGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGAcc       >  2:2820783/1‑93 (MQ=255)
                                                                                   aaaGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCg      >  2:2180147/1‑93 (MQ=255)
                                                                                     aGTGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGtt    >  1:450266/1‑93 (MQ=255)
                                                                                      gTGGCCCGTAAAGTCAGCCCGGTAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGTTa   <  1:4172153/93‑1 (MQ=255)
                                                                                       tGGCCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGTTAc  <  2:3754136/93‑1 (MQ=255)
                                                                                          |                                                                                         
CGTTACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGTCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGTTAC  >  NC_000913/1476749‑1476928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: