BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,479,250	T→C	R106R (CGT→CGC)	ynbD →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,479,250	0	T	C	98.3%	372.6 / ‑2.6	121	R106R (CGT→CGC)	ynbD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/2); new base C (51/67); total (52/69)
Fisher's exact test for biased strand distribution p-value = 5.07e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.61e-01

Only 100 of 123 total aligned reads displayed.

ACAGCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGTCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTAT  >  NC_000913/1479160‑1479339

aCAGCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGCTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGccc                                                                                         >  2:287817/1‑93 (MQ=255)

 cAGCGCCGTCTTGTCCACCGGCTTATGCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCt                                                                                        <  2:995166/93‑1 (MQ=255)

    cgcCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGaa                                                                                     <  1:4700697/93‑1 (MQ=255)

     gcCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAag                                                                                    <  1:2642358/93‑1 (MQ=255)

     cccGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAag                                                                                    <  1:1038432/92‑1 (MQ=255)

      ccGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAagt                                                                                   <  2:2525073/93‑1 (MQ=255)

       cGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAagtg                                                                                  >  2:3249602/1‑93 (MQ=255)

       cGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAagtg                                                                                  <  2:3218389/93‑1 (MQ=255)

        gACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAagtga                                                                                 <  1:3710438/93‑1 (MQ=255)

        gACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAagtga                                                                                 >  2:1987577/1‑93 (MQ=255)

        gACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAagtga                                                                                 >  1:1760488/1‑93 (MQ=255)

         aCTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAagtgag                                                                                <  2:3241765/93‑1 (MQ=255)

           ttGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAagtgagtg                                                                              <  2:486747/93‑1 (MQ=255)

           ttGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAagtgagtg                                                                              >  1:3504997/1‑93 (MQ=255)

           ttGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAagtgagtg                                                                              >  2:4110066/1‑93 (MQ=255)

           ttGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAATTTTATCCGCCCTGAagtgagtg                                                                              >  2:2583320/1‑93 (MQ=255)

              tCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTgggg                                                                           <  2:1882676/93‑1 (MQ=255)

               ccACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGt                                                                          >  2:762347/1‑93 (MQ=255)

                 aCCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGa                                                                        >  1:193619/1‑93 (MQ=255)

                 aCCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGa                                                                        >  1:2923468/1‑93 (MQ=255)

                 aCCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGa                                                                        <  1:4275002/93‑1 (MQ=255)

                  ccGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGAGTGAc                                                                       <  2:3895645/93‑1 (MQ=255)

                    ggCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACgg                                                                     <  2:2727978/93‑1 (MQ=255)

                    ggCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACgg                                                                     <  2:2312819/93‑1 (MQ=255)

                       ttATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGAt                                                                  >  1:479898/1‑93 (MQ=255)

                        tATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATg                                                                 >  2:2639001/1‑93 (MQ=255)

                        tATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATg                                                                 >  1:2232389/1‑93 (MQ=255)

                        tATTCTGGCAACGGTAATGGCCTCCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATg                                                                 <  2:2579907/93‑1 (MQ=255)

                         aTTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATgg                                                                <  2:3227402/93‑1 (MQ=255)

                         aTTCTGGCAACGGTAATGGCCTGCTGCGGCTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGGTgg                                                                >  2:2630032/1‑93 (MQ=255)

                          ttCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGc                                                               <  1:3917812/93‑1 (MQ=255)

                               gCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTAttt                                                          <  1:3284422/93‑1 (MQ=255)

                                cAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTAtttt                                                         <  2:1970025/93‑1 (MQ=255)

                                  aCGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCg                                                       >  2:712859/1‑93 (MQ=255)

                                    ggTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCa                                                     <  1:3194270/93‑1 (MQ=255)

                                    ggTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCa                                                     >  1:4733379/1‑93 (MQ=255)

                                     gTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCaa                                                    >  2:1648914/1‑93 (MQ=255)

                                      tAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAAc                                                   <  1:4627032/93‑1 (MQ=255)

                                      tAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAAc                                                   <  1:485476/93‑1 (MQ=255)

                                       aaTGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACt                                                  >  1:3649116/1‑93 (MQ=255)

                                        aTGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACtt                                                 >  1:2446451/1‑93 (MQ=255)

                                         tGGCCTGCTGCGGGTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTg                                                >  2:2822868/1‑93 (MQ=255)

                                          ggCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACTGGATGGCTATTTTCGCCACTTGa                                               >  2:3228923/1‑93 (MQ=255)

                                          ggCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGa                                               >  2:3228922/1‑93 (MQ=255)

                                            ccTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAAc                                             <  2:2560593/93‑1 (MQ=255)

                                            ccTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAAc                                             <  1:2229610/93‑1 (MQ=255)

                                            ccTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAAc                                             <  1:2229609/93‑1 (MQ=255)

                                              tgctgcGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTg                                           >  2:996309/1‑93 (MQ=255)

                                              tgctgcGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTg                                           >  2:996310/1‑93 (MQ=255)

                                               gctgcGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGt                                          >  1:4283953/1‑93 (MQ=255)

                                                ctgcGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGtt                                         <  2:3512646/93‑1 (MQ=255)

                                                 tgcGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGttt                                        <  1:603769/93‑1 (MQ=255)

                                                  gcGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGTCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTg                                       <  2:3118298/93‑1 (MQ=255)

                                                  gcGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTg                                       <  1:4333804/93‑1 (MQ=255)

                                                    ggTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGAt                                     <  1:4662789/93‑1 (MQ=255)

                                                     gTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATc                                    <  2:2349883/93‑1 (MQ=255)

                                                     gTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATc                                    >  1:3836114/1‑93 (MQ=255)

                                                     gTTTTTTGCTCTATCAGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATc                                    >  2:3881911/1‑93 (MQ=255)

                                                          ttGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCt                               <  1:4430014/93‑1 (MQ=255)

                                                           tGCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCtt                              <  1:2216710/93‑1 (MQ=255)

                                                            gCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTta                             <  1:1289861/93‑1 (MQ=255)

                                                            gCTCTATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTta                             >  2:9318/1‑93 (MQ=255)

                                                             ctctATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTtat                            <  2:4233733/93‑1 (MQ=255)

                                                             ctctATCCGATGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTtat                            <  2:861574/93‑1 (MQ=255)

                                                              tctATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTtata                           <  1:1245758/93‑1 (MQ=255)

                                                              tctATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTtata                           <  1:4671625/93‑1 (MQ=255)

                                                               ctATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATaa                          <  2:3632952/93‑1 (MQ=255)

                                                               ctATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATaa                          >  1:3678430/1‑93 (MQ=255)

                                                                tATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAAc                         >  1:270243/1‑93 (MQ=255)

                                                                tATCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAAc                         <  1:276618/93‑1 (MQ=255)

                                                                 aTCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAAcc                        >  1:1658691/1‑93 (MQ=255)

                                                                 aTCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAAcc                        <  2:140688/93‑1 (MQ=255)

                                                                  tCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCa                       <  1:1021832/93‑1 (MQ=255)

                                                                  tCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCa                       <  1:4510431/93‑1 (MQ=255)

                                                                  tCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCa                       <  1:1021831/93‑1 (MQ=255)

                                                                  tCCGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCa                       <  1:4510432/93‑1 (MQ=255)

                                                                   ccGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAg                      <  2:4236635/93‑1 (MQ=255)

                                                                    cGCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGt                     >  1:932234/1‑93 (MQ=255)

                                                                     gCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGtc                    <  1:1545642/93‑1 (MQ=255)

                                                                     gCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGtc                    >  1:566869/1‑93 (MQ=255)

                                                                     gCTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGtc                    <  2:4038033/93‑1 (MQ=255)

                                                                      cTGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGtct                   >  2:2885684/1‑93 (MQ=255)

                                                                       tGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGtctc                  >  2:3104147/1‑93 (MQ=255)

                                                                       tGAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGtctc                  >  1:1998501/1‑93 (MQ=255)

                                                                        gcagtttagtttTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTcc                 <  2:4247666/91‑1 (MQ=255)

                                                                        gAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTcc                 >  2:4401808/1‑93 (MQ=255)

                                                                        gAAGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTcc                 <  1:3467350/93‑1 (MQ=255)

                                                                         aaGTTTAGTTTTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCt                <  1:687039/93‑1 (MQ=255)

                                                                          agtttagtttTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCtt               >  1:3904438/1‑93 (MQ=255)

                                                                            tttagtttTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCg             >  2:1284704/1‑93 (MQ=255)

                                                                                gtttTATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGc         >  2:2798083/1‑93 (MQ=255)

                                                                                 ttttATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCa        >  1:737292/1‑93 (MQ=255)

                                                                                  tttATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCat       >  2:2912902/1‑93 (MQ=255)

                                                                                  tttATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCat       <  2:4346711/93‑1 (MQ=255)

                                                                                   ttATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCata      <  1:3984150/93‑1 (MQ=255)

                                                                                   ttATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCata      <  1:3113641/93‑1 (MQ=255)

                                                                                    tATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCatat     <  2:4481462/93‑1 (MQ=255)

                                                                                    tATCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCatat     <  2:1811900/93‑1 (MQ=255)

                                                                                      tCCGCCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCAtatta   >  2:999721/1‑93 (MQ=255)

                                                                                       ccGTCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCAtattat  <  2:1556060/93‑1 (MQ=255)

ACAGCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGTCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTAT  >  NC_000913/1479160‑1479339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`