Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,507,951 A→G intergenic (+3/‑76) b1438 → / → b1439 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,507,9510AG99.0% 649.8 / ‑3.3 198intergenic (+3/‑76)b1438/b1439hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (85/111);  total (86/112)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.42e-01

Only 100 of 205 total aligned reads displayed.

ATTTAACTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTACAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCA  >  NC_000913/1507861‑1508043
                                                                                          |                                                                                            
aTTTAACTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCa                                                                                            >  2:983534/1‑93 (MQ=255)
aTTTAACTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCa                                                                                            <  2:4475462/93‑1 (MQ=255)
 tttAACTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAg                                                                                           >  1:2175774/1‑93 (MQ=255)
  ttAACTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGt                                                                                          <  2:712874/93‑1 (MQ=255)
   tAACTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGtt                                                                                         <  2:4648983/93‑1 (MQ=255)
    aaCTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTa                                                                                        <  1:3093185/93‑1 (MQ=255)
    aaCTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTa                                                                                        >  2:2341583/1‑93 (MQ=255)
    aaCTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTa                                                                                        <  2:3103414/93‑1 (MQ=255)
     aCTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCTCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTaa                                                                                       >  1:2476945/1‑93 (MQ=255)
     aCTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTaa                                                                                       >  1:2033529/1‑93 (MQ=255)
     aCTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTaa                                                                                       <  1:3311565/93‑1 (MQ=255)
        tGCATCATGCGACAAAAATTGACGCCGTCCAGTTCGCGGCAAAGGCGCTTGTCAAAGAGTTATCTCTGGCGATGGGTGATTTGCAGGTAACGa                                                                                    >  1:4220414/1‑93 (MQ=255)
         gCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCTCTGGTGATGGTTTAAATGCAGTTAACGaa                                                                                   >  1:317868/1‑93 (MQ=255)
         gCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGaa                                                                                   <  1:1917946/93‑1 (MQ=255)
          catcatGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGaaa                                                                                  <  2:4447979/93‑1 (MQ=255)
          catcatGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGaaa                                                                                  <  1:2301619/93‑1 (MQ=255)
           atcatGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGaaaa                                                                                 <  2:2606503/93‑1 (MQ=255)
           atcatGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGCTATCGCTGGTGATGGTTTAATTGCAGTTAACGaaaa                                                                                 >  2:167444/1‑93 (MQ=255)
             catGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGt                                                                               <  1:3648603/93‑1 (MQ=255)
              atGCGACAAAGATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGtt                                                                              <  2:1646699/93‑1 (MQ=255)
              atGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGtt                                                                              <  2:140046/93‑1 (MQ=255)
              atGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGtt                                                                              >  2:2279149/1‑93 (MQ=255)
               tGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTg                                                                             <  2:3979701/93‑1 (MQ=255)
               tGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTg                                                                             >  2:4617584/1‑93 (MQ=255)
                gCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGt                                                                            >  2:897092/1‑93 (MQ=255)
                  gACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTct                                                                          >  2:1260723/1‑92 (MQ=255)
                  gACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCa                                                                          >  1:544828/1‑93 (MQ=255)
                      aaaaTCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCAtttt                                                                      >  1:3331127/1‑93 (MQ=255)
                      aaaaTCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCAtttt                                                                      >  1:2941412/1‑93 (MQ=255)
                         aTCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTaa                                                                   <  1:1865508/93‑1 (MQ=255)
                          tCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTaac                                                                  <  2:2252388/93‑1 (MQ=255)
                             aCGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTaacaac                                                               <  1:1318629/93‑1 (MQ=255)
                             aCGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTACAGTTAACGAAAAGTTGTCATTTTTaacaac                                                               >  1:4008629/1‑93 (MQ=255)
                              cGCCGTCCAGCGCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACt                                                              <  2:1955850/93‑1 (MQ=255)
                               gCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTg                                                             <  1:4581538/93‑1 (MQ=255)
                                   tCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGatat                                                         >  2:4318138/1‑93 (MQ=255)
                                    ccAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGAtata                                                        <  2:4177631/93‑1 (MQ=255)
                                    ccAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGAtata                                                        <  2:1116745/93‑1 (MQ=255)
                                    ccAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGAtata                                                        <  1:3773579/93‑1 (MQ=255)
                                     cAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGATGTCATTTTTAACAACTGATATAg                                                       >  1:2005010/1‑93 (MQ=255)
                                      aGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGa                                                      <  1:4555266/93‑1 (MQ=255)
                                       gCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGAc                                                     <  2:2377659/93‑1 (MQ=255)
                                          cgcgGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGc                                                  <  2:2266399/93‑1 (MQ=255)
                                          cgcgGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGc                                                  <  2:1523725/93‑1 (MQ=255)
                                            cgGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCg                                                <  1:2716853/93‑1 (MQ=255)
                                             ggCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGa                                               <  1:2330274/93‑1 (MQ=255)
                                               cAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAat                                             <  2:3812084/93‑1 (MQ=255)
                                                aaaGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAatc                                            <  2:454785/93‑1 (MQ=255)
                                                 aaGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAatca                                           <  1:1700377/93‑1 (MQ=255)
                                                 aaGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAataa                                           >  2:1173458/1‑91 (MQ=255)
                                                  aGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAatcat                                          <  1:1980251/93‑1 (MQ=255)
                                                   ggCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAatcatc                                         <  2:1718407/93‑1 (MQ=255)
                                                   ggCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAatcatc                                         <  2:2354502/93‑1 (MQ=255)
                                                    gcgcTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCt                                        >  1:4428577/1‑93 (MQ=255)
                                                      gcTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGc                                      >  1:1327399/1‑93 (MQ=255)
                                                      gcTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGc                                      <  2:1829705/93‑1 (MQ=255)
                                                       cTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGca                                     <  1:2576270/93‑1 (MQ=255)
                                                        ttGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGcac                                    <  1:1938068/93‑1 (MQ=255)
                                                         tGGCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGcaca                                   <  1:1135053/93‑1 (MQ=255)
                                                          ggCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACAt                                  >  2:570920/1‑93 (MQ=255)
                                                           gCAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATa                                 <  2:3528339/93‑1 (MQ=255)
                                                            cAAAGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATaa                                >  1:4372961/1‑93 (MQ=255)
                                                             aaaGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAAt                               >  1:3412560/1‑93 (MQ=255)
                                                             aaaGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAAt                               >  2:2682024/1‑93 (MQ=255)
                                                             aaaGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAAt                               >  2:2567454/1‑93 (MQ=255)
                                                             aaaGAGTTATCGCTGGTGATGGTTTAATTACAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAAt                               <  1:4529448/93‑1 (MQ=255)
                                                              aaGAGTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAAtt                              >  2:1221755/1‑93 (MQ=255)
                                                                gagTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTAc                            >  1:804933/1‑93 (MQ=255)
                                                                gagTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTAc                            <  2:1877359/93‑1 (MQ=255)
                                                                gagTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTAc                            >  2:1369049/1‑93 (MQ=255)
                                                                  gTTATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGa                          <  1:966921/93‑1 (MQ=255)
                                                                    tATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGAtt                        <  2:2907585/93‑1 (MQ=255)
                                                                    tATCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGAtt                        <  2:886357/93‑1 (MQ=255)
                                                                     aTCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTc                       >  2:1735661/1‑93 (MQ=255)
                                                                     aTCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTc                       <  2:4120445/93‑1 (MQ=255)
                                                                     aTCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTc                       <  2:207437/93‑1 (MQ=255)
                                                                      tCGCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCg                      <  2:2503950/93‑1 (MQ=255)
                                                                        gCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGAt                    <  2:2507074/93‑1 (MQ=255)
                                                                        gCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGAt                    <  1:1421661/93‑1 (MQ=255)
                                                                        gCTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGAt                    <  2:498482/93‑1 (MQ=255)
                                                                         cTGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATa                   <  2:2163851/93‑1 (MQ=255)
                                                                          tGGTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATaa                  >  2:2111227/1‑93 (MQ=255)
                                                                           ggTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAAt                 <  1:2372787/93‑1 (MQ=255)
                                                                           ggTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAAt                 <  2:1348617/93‑1 (MQ=255)
                                                                           ggTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAAt                 <  2:1562250/93‑1 (MQ=255)
                                                                            gTGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATg                >  2:92483/1‑93 (MQ=255)
                                                                             tGATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGa               <  2:1702526/93‑1 (MQ=255)
                                                                              gATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGaa              >  2:4385094/1‑93 (MQ=255)
                                                                              gATGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGaa              >  2:2532696/1‑93 (MQ=255)
                                                                                tGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGaaaa            >  1:709759/1‑93 (MQ=255)
                                                                                tGGTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGaaaa            <  2:1308736/93‑1 (MQ=255)
                                                                                  gTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGaaaaaa          <  1:732893/93‑1 (MQ=255)
                                                                                  gTTTAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGaaaaaa          <  1:861075/93‑1 (MQ=255)
                                                                                   tttAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAAt         <  1:834357/93‑1 (MQ=255)
                                                                                   tttAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAAt         >  1:1585787/1‑93 (MQ=255)
                                                                                   tttAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAAt         >  1:3549424/1‑93 (MQ=255)
                                                                                   tttAATTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAAt         >  1:2877487/1‑93 (MQ=255)
                                                                                       aTTGCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAACAAATACca     >  2:4509963/1‑93 (MQ=255)
                                                                                       aTTGCAGTTAACGAAAAGTTGTCATTTTCAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACca     <  1:3588912/93‑1 (MQ=255)
                                                                                          aCAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACcagca  <  1:973922/93‑1 (MQ=255)
                                                                                          |                                                                                            
ATTTAACTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAATTACAGTTAACGAAAAGTTGTCATTTTTAACAACTGATATAGACTGCCGAATCATCTGCACATAATTACGATTCGATAATGAAAAAATACCAGCA  >  NC_000913/1507861‑1508043

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑