BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,531,361	T→C	H188R (CAT→CGT)	b1462 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,531,361	0	T	C	100.0%	384.7 / NA	116	H188R (CAT→CGT)	b1462	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (64/52); total (64/52)

Only 100 of 120 total aligned reads displayed.

GCTTTGATAAAGAAACCTGG‑TT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGATGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCAAAC  >  NC_000913/1531271‑1531450

gCTTTGATAAAGAAACCTGG‑TT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGc                                                                                         >  2:4564370/1‑93 (MQ=255)

gCTTAGAAAAAGAACCTTGG‑TT‑ATAGAAAAATTGCTTACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGc                                                                                         <  1:4554966/93‑1 (MQ=255)

 cTTTGATAAAGAAACCTGG‑TT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCa                                                                                        >  1:289288/1‑93 (MQ=255)

  tttGATAAAGAAACCTGG‑TT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCaa                                                                                       >  2:1050553/1‑93 (MQ=255)

  tttGATAAAGAAACCTGG‑TT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGCCCCAGCACCTAAATGACGCac                                                                                       >  1:4683559/1‑92 (MQ=255)

   ttGATAAAGAAACCTGG‑TT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAAc                                                                                      >  1:3610563/1‑93 (MQ=255)

    tGATAAAGAAACCTGG‑TT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACg                                                                                     >  1:3952148/1‑93 (MQ=255)

    tGAAAAAGAACCCTGT‑TT‑ATAGCATAATTGCTTACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACg                                                                                     <  1:1547347/93‑1 (MQ=255)

      aTAAAGAACCCGTT‑TG‑ATACCATGAATGCTCACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTa                                                                                   <  2:3286512/93‑1 (MQ=255)

       aaaaaaaACCTTG‑TTAAAAGAATAAATCTTTACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTa                                                                                   <  2:3286511/92‑1 (MQ=255)

        aaaaaaACTTGT‑TT‑AAGGCATGAATGCTTACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTAtt                                                                                 <  1:3680163/93‑1 (MQ=255)

        aaaGAAACCTGG‑TT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTAtt                                                                                 >  1:1342469/1‑93 (MQ=255)

        aaaGAAACCTGG‑TT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTAtt                                                                                 >  2:3185645/1‑93 (MQ=255)

         aaGAACCCTGG‑TA‑ATAGCATGAATGCTTACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTg                                                                                <  1:1282497/93‑1 (MQ=255)

         aaGAAACCTGG‑TT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTg                                                                                >  1:3296576/1‑93 (MQ=255)

          aGAACCTTGT‑TT‑ATAGCATAAATGCTCACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGa                                                                               <  2:613506/93‑1 (MQ=255)

          aGAACCTTGT‑TT‑ATAGAATGAATGCTCACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGa                                                                               <  1:1831958/93‑1 (MQ=255)

          aGAAACCTGG‑TT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGa                                                                               >  2:3741490/1‑93 (MQ=255)

          aGAAACCTGG‑TT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGa                                                                               >  1:3764664/1‑93 (MQ=255)

           gAAACCTGG‑TT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAg                                                                              >  2:535734/1‑93 (MQ=255)

           aaaaCTTGG‑TT‑ATAGAATAAACGCTTACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAg                                                                              <  2:3653238/92‑1 (MQ=255)

           aaaaCCTTGTTT‑ATAGCAAGAATGCTTACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGa                                                                               <  1:1831960/92‑1 (MQ=255)

                 tGG‑TT‑ATAGATAGAATTCTCCCCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatc                                                                        <  1:4623540/93‑1 (MQ=255)

                   g‑TT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAAAGTATTGAGCTTatcat                                                                      >  2:1841971/1‑93 (MQ=255)

                     tt‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatcatc                                                                     >  2:2779245/1‑93 (MQ=255)

                     tt‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatcatc                                                                     >  2:2779244/1‑93 (MQ=255)

                     tt‑ATAGCATGAATGCTCACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatcatc                                                                     <  2:4450950/93‑1 (MQ=255)

                        ataGCATGAATGCTTAACCCGCCGTAACACGATTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatcatcat                                                                   >  2:4370267/1‑93 (MQ=255)

                         taGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatcatcatc                                                                  >  1:2116141/1‑93 (MQ=255)

                         taGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatcatcatc                                                                  >  2:3780454/1‑93 (MQ=255)

                           acATAAATCCTTACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCaa                                                                <  1:1658689/92‑1 (MQ=255)

                            cATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCaaa                                                               >  2:107779/1‑93 (MQ=255)

                              tGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACt                                                             >  2:269863/1‑93 (MQ=255)

                                 aTGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGcc                                                          >  2:1105105/1‑93 (MQ=255)

                                   gCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAg                                                        >  1:71471/1‑93 (MQ=255)

                                     ttAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCg                                                      >  2:2488869/1‑93 (MQ=255)

                                     caaccccGCCGTAACACGCTCGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCg                                                      <  2:3460164/89‑1 (MQ=255)

                                        ccccGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGcc                                                   <  1:2165570/92‑1 (MQ=255)

                                        aCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGcc                                                   >  1:735443/1‑93 (MQ=255)

                                         cccGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCt                                                  <  2:553891/93‑1 (MQ=255)

                                         cccGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCt                                                  <  1:645171/93‑1 (MQ=255)

                                         cccGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCt                                                  <  2:554093/93‑1 (MQ=255)

                                          ccgccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTGTTGAGCTTATCATCATCAAACTGCCAGCGGCCtt                                                 >  1:2553850/1‑93 (MQ=255)

                                          ccgccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCtt                                                 <  2:1654586/93‑1 (MQ=255)

                                          ccgccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCtt                                                 >  2:3448801/1‑93 (MQ=255)

                                           cgccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTc                                                <  2:2551813/93‑1 (MQ=255)

                                           cgccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTc                                                >  1:3039284/1‑93 (MQ=255)

                                            gccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCg                                               >  1:3688708/1‑93 (MQ=255)

                                              cgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGAc                                             <  1:4563116/93‑1 (MQ=255)

                                              cgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGAc                                             >  1:4384445/1‑93 (MQ=255)

                                              cgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGAc                                             <  2:1739234/93‑1 (MQ=255)

                                               gTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACa                                            >  2:3631177/1‑93 (MQ=255)

                                               gTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACa                                            <  1:4055212/93‑1 (MQ=255)

                                               gTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACa                                            >  2:1036928/1‑93 (MQ=255)

                                                 aaCACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACaaa                                          <  1:1169299/93‑1 (MQ=255)

                                                 aaCACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACaaa                                          >  2:3516687/1‑93 (MQ=255)

                                                 aaCACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACaaa                                          <  1:1251235/93‑1 (MQ=255)

                                                  acacGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAAt                                         >  2:1983621/1‑93 (MQ=255)

                                                    acGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAc                                       <  1:2333260/93‑1 (MQ=255)

                                                    acGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAc                                       <  1:3098642/93‑1 (MQ=255)

                                                     cGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAcc                                      >  1:660846/1‑93 (MQ=255)

                                                     cGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAcc                                      >  1:2154011/1‑93 (MQ=255)

                                                     cGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAcc                                      >  1:2154012/1‑93 (MQ=255)

                                                     cGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAcc                                      >  1:660845/1‑93 (MQ=255)

                                                      gCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAccc                                     >  2:1035450/1‑93 (MQ=255)

                                                      gCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAccc                                     >  1:3183196/1‑93 (MQ=255)

                                                       cTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCg                                    <  1:4342754/93‑1 (MQ=255)

                                                        ttGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGt                                   <  1:392960/93‑1 (MQ=255)

                                                             gCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTc                              <  1:11455/93‑1 (MQ=255)

                                                             gCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTc                              <  1:2016542/93‑1 (MQ=255)

                                                             gCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTc                              >  2:4147859/1‑93 (MQ=255)

                                                             gCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTc                              <  2:2877810/93‑1 (MQ=255)

                                                               tGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTg                            >  1:3014140/1‑93 (MQ=255)

                                                               tGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAAAACCCGTGCGTCtc                            >  2:2885687/1‑92 (MQ=255)

                                                                 gTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGcc                          <  2:1843980/93‑1 (MQ=255)

                                                                 gTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGcc                          <  1:550955/93‑1 (MQ=255)

                                                                   aaCAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgc                        >  2:3650430/1‑93 (MQ=255)

                                                                   aaCAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgc                        <  2:2701125/93‑1 (MQ=255)

                                                                      aaaCGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgctgc                     <  2:513787/93‑1 (MQ=255)

                                                                      aaaCGTCCCAGCACCTAAATGACCCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgctgc                     >  2:2721127/1‑93 (MQ=255)

                                                                       aaCGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgctgct                    >  2:392937/1‑93 (MQ=255)

                                                                          gTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAt                 >  2:2068769/1‑93 (MQ=255)

                                                                           tCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAta                >  1:2425882/1‑93 (MQ=255)

                                                                           tCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAta                >  2:1598389/1‑93 (MQ=255)

                                                                           tCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAta                <  2:3516287/93‑1 (MQ=255)

                                                                             ccAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtact              >  1:4407995/1‑93 (MQ=255)

                                                                             ccAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtact              >  1:1881059/1‑93 (MQ=255)

                                                                               aGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTTCCAGCGGCCTTCGACAAATACCAGTGCGTCTGCCGCTGCTGAtactac            >  2:2118302/1‑93 (MQ=255)

                                                                               aGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtactac            <  1:2462966/93‑1 (MQ=255)

                                                                                gCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATactact           <  2:356806/93‑1 (MQ=255)

                                                                                 cACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACtt          <  2:297393/93‑1 (MQ=255)

                                                                                  aCCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTc         <  1:3448921/93‑1 (MQ=255)

                                                                                  aCCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTc         >  1:3268066/1‑93 (MQ=255)

                                                                                  aCCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTc         >  1:3238159/1‑93 (MQ=255)

                                                                                  aCCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTc         >  2:2001176/1‑93 (MQ=255)

                                                                                   ccTAAATGACTCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCg        >  1:4213921/1‑93 (MQ=255)

                                                                                     tAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGcc      >  2:3379919/1‑93 (MQ=255)

                                                                                     tAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGcc      >  2:2157590/1‑93 (MQ=255)

                                                                                       aaTGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCaa    <  2:3384006/93‑1 (MQ=255)

                                                                                         tgacgCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCAAAc  <  1:2676377/93‑1 (MQ=255)

GCTTTGATAAAGAAACCTGG‑TT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGATGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCAAAC  >  NC_000913/1531271‑1531450

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`