Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,549,144 T→C G220G (GGT→GGC fdnH → formate dehydrogenase‑N, nitrate‑inducible, iron‑sulfur beta subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,549,1440TC99.1% 336.7 / NA 107G220G (GGT→GGCfdnHformate dehydrogenase‑N, nitrate‑inducible, iron‑sulfur beta subunit
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (60/46);  total (61/46)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 117 total aligned reads displayed.

GGAGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGTGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTC  >  NC_000913/1549054‑1549230
                                                                                          |                                                                                      
ggAGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTcggcgg                                                                                      >  1:4184590/1‑93 (MQ=255)
ggAGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTcggcgg                                                                                      <  2:4556016/93‑1 (MQ=255)
 gagaTGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCggcggt                                                                                     >  2:1407862/1‑93 (MQ=255)
  agaTGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTa                                                                                    <  1:3411536/93‑1 (MQ=255)
  agaTGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTa                                                                                    >  1:990841/1‑93 (MQ=255)
    aTGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACg                                                                                  <  2:4511325/93‑1 (MQ=255)
    aTGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACg                                                                                  >  2:3879259/1‑93 (MQ=255)
     tGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGCAGGGGTCGGTGGTACGc                                                                                 >  2:4001302/1‑93 (MQ=255)
     tGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGc                                                                                 <  1:4107300/93‑1 (MQ=255)
       cTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCAc                                                                               >  2:3026671/1‑93 (MQ=255)
       cTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCAc                                                                               <  1:1963199/93‑1 (MQ=255)
         ggAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGt                                                                             <  2:830781/93‑1 (MQ=255)
         ggAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGt                                                                             <  2:1124433/93‑1 (MQ=255)
         ggAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGt                                                                             >  2:2530738/1‑93 (MQ=255)
            gCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTAt                                                                          >  2:4590059/1‑93 (MQ=255)
              tGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGt                                                                        >  2:1466628/1‑93 (MQ=255)
              tGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGt                                                                        >  1:3407272/1‑93 (MQ=255)
               tgCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTa                                                                       <  2:1484201/92‑1 (MQ=255)
               ggCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTa                                                                       >  2:1203574/1‑93 (MQ=255)
               ggCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTa                                                                       <  1:3592126/93‑1 (MQ=255)
                  ggAACAGCGCGTGGCGAAACTGAAAGCGCGGGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGt                                                                    >  1:722847/1‑93 (MQ=255)
                    aaCAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTGTGTACGtga                                                                  >  1:3014580/1‑92 (MQ=255)
                     aCAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGtgct                                                                 <  1:1844946/93‑1 (MQ=255)
                     aCAGCGCGTGACGAAAATGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGACGGAGGTACGCACGGTATGTACGtcag                                                                 >  2:3203803/1‑90 (MQ=255)
                       aGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGGCCGGTATGTACGtgctgc                                                               >  2:1066254/1‑93 (MQ=255)
                        gcgcGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCa                                                              <  2:1662068/93‑1 (MQ=255)
                          gcgTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATc                                                            <  1:2999889/93‑1 (MQ=255)
                            gTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCAc                                                          >  1:1453839/1‑93 (MQ=255)
                            gTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCAc                                                          <  1:927112/93‑1 (MQ=255)
                            gTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCAc                                                          >  1:1264987/1‑93 (MQ=255)
                            gTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCAc                                                          >  2:1246768/1‑93 (MQ=255)
                              ggCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGc                                                        <  1:3571439/93‑1 (MQ=255)
                              ggCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGc                                                        <  1:4489488/93‑1 (MQ=255)
                              ggCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGCCGGCGGTACGCACGTTATGTACGTGCTGCATCACGc                                                        <  2:1130695/93‑1 (MQ=255)
                               gCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGcc                                                       <  1:1892511/93‑1 (MQ=255)
                               gCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGcc                                                       >  2:2953263/1‑93 (MQ=255)
                                 gagaCTGACGGCGCGTGATTGCGAACGTGCTGGCGTCTGCGACCCGGAAGGGGTCGGCGGTGCGCACGTTATGTACGTGCTGCCTCACGCCGa                                                     <  1:4194537/90‑1 (MQ=255)
                                 gAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGa                                                     >  1:2678708/1‑93 (MQ=255)
                                 gAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGa                                                     <  1:2466758/93‑1 (MQ=255)
                                  aaaCTGAAAGCGCGTGGTTACGAACATGCAGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGAt                                                    >  2:2908364/1‑93 (MQ=255)
                                   aaCTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGTTACGCACGTTATGTACGTGCTGCATCACGCCGATc                                                   >  2:4273141/1‑93 (MQ=255)
                                   aaCTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATc                                                   >  1:4445912/1‑93 (MQ=255)
                                    aCTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCa                                                  >  2:1935889/1‑93 (MQ=255)
                                     cTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAg                                                 <  2:763061/93‑1 (MQ=255)
                                       gAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGcc                                               <  1:4297584/93‑1 (MQ=255)
                                       gAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGcc                                               >  2:1203924/1‑93 (MQ=255)
                                        aaaGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGGATCACGCCGATCAGCCg                                              >  2:230749/1‑93 (MQ=255)
                                        aaaGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCg                                              >  2:4544311/1‑93 (MQ=255)
                                        aaaGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCg                                              >  1:3059181/1‑93 (MQ=255)
                                           gcgcGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAg                                           >  1:2457126/1‑93 (MQ=255)
                                            cgcgTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGc                                          <  2:1250696/93‑1 (MQ=255)
                                              cgTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTg                                        <  2:292330/93‑1 (MQ=255)
                                              cgTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTg                                        <  2:2974821/93‑1 (MQ=255)
                                                 ggTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTAt                                     >  1:2465789/1‑93 (MQ=255)
                                                     aCGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACg                                 >  1:1772760/1‑93 (MQ=255)
                                                      cGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACgg                                >  2:4595532/1‑93 (MQ=255)
                                                      cGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACgg                                <  2:1023004/93‑1 (MQ=255)
                                                      cGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACgg                                >  2:4595533/1‑93 (MQ=255)
                                                        aaCATGCTGGTGGATACAACCCGGAAGGGGTCGGCGGTACGCACTGTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTc                              <  2:4025356/93‑1 (MQ=255)
                                                        aaCATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATTACGCCCATCAGCCGGAGCTGTATCACGGTc                              >  2:3729715/1‑93 (MQ=255)
                                                        aaCATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTc                              <  1:4462786/93‑1 (MQ=255)
                                                        aaCATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTc                              >  2:484791/1‑93 (MQ=255)
                                                        aaCATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTc                              <  2:3739243/93‑1 (MQ=255)
                                                         aCATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCt                             <  2:3503734/93‑1 (MQ=255)
                                                         aCATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCt                             >  1:2908157/1‑93 (MQ=255)
                                                         aCATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCt                             >  2:4743998/1‑93 (MQ=255)
                                                         aCATGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCt                             <  2:2095130/93‑1 (MQ=255)
                                                           aTGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGc                           >  1:2078414/1‑93 (MQ=255)
                                                            tGCTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGcc                          <  1:1658006/93‑1 (MQ=255)
                                                              cTGGCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGa                        >  2:2701785/1‑93 (MQ=255)
                                                                tgCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGaaa                      <  1:1309607/92‑1 (MQ=255)
                                                                ggCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGaaa                      >  2:2678956/1‑93 (MQ=255)
                                                                ggCGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGaaa                      >  1:637720/1‑93 (MQ=255)
                                                                 gCGTCTACAGCCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAg                     <  2:1906283/93‑1 (MQ=255)
                                                                  cGTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGa                    <  1:3712536/93‑1 (MQ=255)
                                                                   gTCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGAt                   >  1:4497393/1‑93 (MQ=255)
                                                                    tCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATc                  <  2:588726/93‑1 (MQ=255)
                                                                    tCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATc                  <  1:1193460/93‑1 (MQ=255)
                                                                    tCTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATc                  <  2:3631313/93‑1 (MQ=255)
                                                                     cTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATcc                 <  1:3116222/93‑1 (MQ=255)
                                                                     cTACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATcc                 >  2:252858/1‑93 (MQ=255)
                                                                     cTACAACCCGGAAGGGGTCGGCGGTACGCACGATATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTATATCAAGGTCTGCCGAAAGATcc                 >  2:2624206/1‑93 (MQ=255)
                                                                      tACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGCGCTGTATCACGGTCTGCCGAAAGATCCg                >  1:1411772/1‑93 (MQ=255)
                                                                      tACAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCg                >  1:4458757/1‑93 (MQ=255)
                                                                        cAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGaa              <  2:1517780/93‑1 (MQ=255)
                                                                        cAACCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGaa              >  2:1929514/1‑93 (MQ=255)
                                                                         aaCCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAg             >  2:3396489/1‑93 (MQ=255)
                                                                         aaCCCGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAg             >  1:1892144/1‑93 (MQ=255)
                                                                           cccGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGAt           >  1:3168996/1‑93 (MQ=255)
                                                                           accGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGAt           <  1:836228/92‑1 (MQ=255)
                                                                            ccGGAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATc          <  1:1060090/93‑1 (MQ=255)
                                                                            ccGGAAGGGGGCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATc          >  1:4277120/1‑93 (MQ=255)
                                                                               gAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCgcc       >  1:1940793/1‑91 (MQ=255)
                                                                               gAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGac       >  1:4576343/1‑93 (MQ=255)
                                                                               gAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGac       >  1:4576342/1‑93 (MQ=255)
                                                                               gAAGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCAGAAGATCGac       >  1:1789867/1‑93 (MQ=255)
                                                                                aaGGGGTCGGTGGGACGCACGTTATGTACGTGCTGCATCACGCCGATTAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGacc      >  2:3896646/1‑92 (MQ=255)
                                                                                 aGGGGTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGacac     >  2:4071847/1‑93 (MQ=255)
                                                                                   gggTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCt   >  2:3366845/1‑93 (MQ=255)
                                                                                    ggTCGGCGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTc  <  2:1659829/93‑1 (MQ=255)
                                                                                          |                                                                                      
GGAGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGTGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTC  >  NC_000913/1549054‑1549230

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: