BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,567,922	A→G	F198L (TTC→CTC)	xasA ←	acid sensitivity protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,567,922	0	A	G	100.0%	370.2 / NA	113	F198L (TTC→CTC)	xasA	acid sensitivity protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (54/59); total (54/59)

Only 100 of 115 total aligned reads displayed.

TCATTTCATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAAGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAATAAAT  >  NC_000913/1567832‑1568010

tcatttcattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGt                                                                                        <  2:3208938/93‑1 (MQ=255)

 catttcattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTc                                                                                       >  2:2011496/1‑93 (MQ=255)

  atttcattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCa                                                                                      <  2:444864/93‑1 (MQ=255)

  atttcattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCa                                                                                      <  1:2219557/93‑1 (MQ=255)

   tttcattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAg                                                                                     >  1:4382644/1‑93 (MQ=255)

   tttcattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAg                                                                                     >  1:1637767/1‑93 (MQ=255)

    ttcattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAgg                                                                                    <  2:4729263/93‑1 (MQ=255)

    ttcattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAgg                                                                                    <  2:2458609/93‑1 (MQ=255)

     tcattGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAggg                                                                                   <  1:2299743/93‑1 (MQ=255)

       attGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGgaa                                                                                 <  1:4061754/93‑1 (MQ=255)

          gACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGgaagaa                                                                              <  1:1692194/93‑1 (MQ=255)

          gACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGgaagaa                                                                              <  1:477078/93‑1 (MQ=255)

          gACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGgaagaa                                                                              >  1:2991723/1‑93 (MQ=255)

            cGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAgg                                                                            >  2:2732342/1‑93 (MQ=255)

             gTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGt                                                                           <  1:3601392/93‑1 (MQ=255)

               gggTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCt                                                                         <  2:4374855/93‑1 (MQ=255)

               gggTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCt                                                                         <  1:4132051/93‑1 (MQ=255)

                ggTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCATGGAAGAAGGTCtt                                                                        <  2:2608751/93‑1 (MQ=255)

                  ttGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCg                                                                      <  1:2101674/93‑1 (MQ=255)

                      ggATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATc                                                                  <  1:949005/93‑1 (MQ=255)

                         tGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCAt                                                               <  2:1810703/93‑1 (MQ=255)

                          gCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCAtt                                                              >  2:2044753/1‑93 (MQ=255)

                           cTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCAttt                                                             <  2:438595/93‑1 (MQ=255)

                           cTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCAttt                                                             <  1:922330/93‑1 (MQ=255)

                            ttCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTc                                                            >  1:3080917/1‑93 (MQ=255)

                            ttCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTc                                                            >  1:3415173/1‑93 (MQ=255)

                            ttCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTc                                                            >  2:2759979/1‑93 (MQ=255)

                            ttCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGGCAGGGAAGAAGGTCTTCGAATCCATTTc                                                            >  1:647320/1‑93 (MQ=255)

                              cTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGa                                                          >  2:4412163/1‑93 (MQ=255)

                              cTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGa                                                          >  1:2504169/1‑93 (MQ=255)

                               tACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGAt                                                         >  2:874360/1‑93 (MQ=255)

                               tACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGAt                                                         >  1:1189795/1‑93 (MQ=255)

                                 cGCCCATATAACTCAAAATGAAGGCAACAAATCCTACCCGGGTCCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAg                                                       <  1:1673605/93‑1 (MQ=255)

                                 cGCCCATATAACTCAAAATGAAGGCAACAAATACTGCCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAg                                                       <  1:536029/93‑1 (MQ=255)

                                  gCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGc                                                      >  1:3666258/1‑93 (MQ=255)

                                  gCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGc                                                      >  2:3954531/1‑93 (MQ=255)

                                   cccATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCa                                                     >  1:1870757/1‑93 (MQ=255)

                                    ccATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCaa                                                    >  1:2706743/1‑93 (MQ=255)

                                     cATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAAc                                                   <  1:3503546/93‑1 (MQ=255)

                                     cATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAAc                                                   <  1:5427/93‑1 (MQ=255)

                                      atatAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCACAGAAGAAGGTCTTCGAATACTTTTCGATAGCAACg                                                  >  2:1523423/1‑93 (MQ=255)

                                      aaataACTCAAAATGAAGGCATCAAGTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACg                                                  <  2:1631856/91‑1 (MQ=255)

                                       tataACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACgg                                                 >  2:4261165/1‑93 (MQ=255)

                                        ataACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACggg                                                >  2:4251500/1‑93 (MQ=255)

                                        ataACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACggg                                                <  2:4029459/93‑1 (MQ=255)

                                         taACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACgggg                                               >  2:1957837/1‑93 (MQ=255)

                                         taACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACgggg                                               <  1:2032234/93‑1 (MQ=255)

                                         taACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACgggg                                               <  1:3208228/93‑1 (MQ=255)

                                           aCTCAAAATGAAGGCAACAAATACTACTAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGc                                             >  1:1083549/1‑93 (MQ=255)

                                           aCTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGc                                             <  1:4023076/93‑1 (MQ=255)

                                            cTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCa                                            >  1:4480562/1‑93 (MQ=255)

                                            cTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCa                                            <  2:4432911/93‑1 (MQ=255)

                                             tCAAAATGACGGCAACAAATACTACCAGGGTCCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTGGAATCCATTTTGATAGCACCGGCGGCAc                                           >  1:3835407/1‑93 (MQ=255)

                                             tCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGTGGCAc                                           >  2:3275371/1‑93 (MQ=255)

                                             tCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCAc                                           >  2:3275370/1‑93 (MQ=255)

                                             tCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCAc                                           <  2:3258567/93‑1 (MQ=255)

                                             tCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCAc                                           >  1:1083244/1‑93 (MQ=255)

                                               aaaaTGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCg                                         <  1:999978/93‑1 (MQ=255)

                                               aaaaTGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCg                                         <  1:2114810/93‑1 (MQ=255)

                                                aaaTGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCgg                                        >  2:497183/1‑93 (MQ=255)

                                                 aaTGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGa                                       <  1:1128233/93‑1 (MQ=255)

                                                 aaTGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGa                                       >  2:2887525/1‑93 (MQ=255)

                                                  aTGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAg                                      >  2:3866782/1‑93 (MQ=255)

                                                   tGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGt                                     >  1:3017704/1‑93 (MQ=255)

                                                   tGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGt                                     <  2:431376/93‑1 (MQ=255)

                                                     aaGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGc                                   >  2:1613332/1‑93 (MQ=255)

                                                       ggCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAg                                 <  1:474152/93‑1 (MQ=255)

                                                        gCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGa                                <  2:2269635/93‑1 (MQ=255)

                                                        gCAACAAATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGa                                <  2:198172/93‑1 (MQ=255)

                                                          aacaaATACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATa                              <  1:728288/93‑1 (MQ=255)

                                                            aaaaTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATaaa                            <  1:2988545/92‑1 (MQ=255)

                                                             aaaTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAAt                           >  2:2691337/1‑93 (MQ=255)

                                                             aaaTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAAt                           <  1:4239293/93‑1 (MQ=255)

                                                              aaTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATa                          <  2:3860338/93‑1 (MQ=255)

                                                              aaTACTACCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATa                          >  2:3264476/1‑93 (MQ=255)

                                                                tactacCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGc                        <  1:3758146/93‑1 (MQ=255)

                                                                  ctacCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCg                      <  1:1227820/93‑1 (MQ=255)

                                                                   tacCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGc                     >  1:672055/1‑93 (MQ=255)

                                                                   tacCAGGGTGCCAACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGc                     <  2:486204/93‑1 (MQ=255)

                                                                    acCAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCt                    <  1:1141202/93‑1 (MQ=255)

                                                                      cAGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTaa                  >  2:2785005/1‑93 (MQ=255)

                                                                       aGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAAt                 >  2:4733878/1‑93 (MQ=255)

                                                                       aGGGTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAAt                 >  2:4684485/1‑93 (MQ=255)

                                                                        gggTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATg                <  1:3835731/93‑1 (MQ=255)

                                                                        gggTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATg                <  1:2219650/93‑1 (MQ=255)

                                                                        gggTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATg                >  2:2191624/1‑93 (MQ=255)

                                                                         ggTGCCCACTTTAGAGGGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGc               <  2:1084602/93‑1 (MQ=255)

                                                                         ggTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGc               <  2:3438103/93‑1 (MQ=255)

                                                                         ggTGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGc               <  1:2877799/93‑1 (MQ=255)

                                                                           tGCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGa             <  1:133439/93‑1 (MQ=255)

                                                                            gCCCACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGAt            <  2:1629151/93‑1 (MQ=255)

                                                                             cccACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATc           <  2:3733379/93‑1 (MQ=255)

                                                                              ccACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCa          >  2:1603517/1‑93 (MQ=255)

                                                                               cACTTTAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCaa         >  1:994924/1‑93 (MQ=255)

                                                                                  tttAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAaaat      >  2:4609525/1‑93 (MQ=255)

                                                                                  tttAGAGAGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAaaat      >  1:1948879/1‑93 (MQ=255)

                                                                                     agagagGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAaaataaa   >  1:3512920/1‑93 (MQ=255)

                                                                                     agagagGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAaaataaa   >  1:3922547/1‑93 (MQ=255)

                                                                                      gagaGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAaaataaat  >  2:2508811/1‑93 (MQ=255)

                                                                                      gagaGGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAaaataaat  <  1:292626/93‑1 (MQ=255)

TCATTTCATTGACGTGGGTTGCGGATGCTTCTACGCCCATATAACTCAAAATGAAGGCAACAAATACTACCAGGGTGCCCACTTTAGAGAAGTCAGGGAAGAAGGTCTTCGAATCCATTTCGATAGCAACGGGGGCACCGGAGTGCAGATAAATAGCCGCTAATGCGATCAAAATAAAT  >  NC_000913/1567832‑1568010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`