BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	177,386	C→T	R80H (CGC→CAC)	yadS ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	177,386	0	C	T	100.0%	453.2 / NA	134	R80H (CGC→CAC)	yadS	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (63/71); total (63/71)

Only 100 of 152 total aligned reads displayed.

AAGGCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGCGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAGC  >  NC_000913/177296‑177475

aaGGCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGgtgc                                                                                         >  1:4368193/1‑93 (MQ=255)

aaGGCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGgtgc                                                                                         <  2:3184580/93‑1 (MQ=255)

aaGGCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGgtgc                                                                                         >  2:3647872/1‑93 (MQ=255)

 aGGCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCa                                                                                        >  1:3904326/1‑93 (MQ=255)

  ggCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCAc                                                                                       <  2:189356/93‑1 (MQ=255)

  ggCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCAc                                                                                       >  2:459007/1‑93 (MQ=255)

  ggCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCAc                                                                                       <  1:1489380/93‑1 (MQ=255)

  ggCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCAAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCAc                                                                                       >  2:3760568/1‑93 (MQ=255)

   gCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCAcc                                                                                      <  2:2394321/93‑1 (MQ=255)

    cTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCa                                                                                     >  1:390658/1‑93 (MQ=255)

     tttATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAg                                                                                    >  1:4293539/1‑93 (MQ=255)

      ttATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGc                                                                                   >  2:1643681/1‑93 (MQ=255)

      ttATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGc                                                                                   <  2:1877817/93‑1 (MQ=255)

      ttATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGc                                                                                   >  2:2356478/1‑93 (MQ=255)

       tATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCa                                                                                  >  2:4598912/1‑93 (MQ=255)

         ttCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACg                                                                                >  2:2452462/1‑93 (MQ=255)

          tCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGa                                                                               >  1:1818714/1‑93 (MQ=255)

           cccGCCAATCCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGAt                                                                              <  2:480520/91‑1 (MQ=255)

           cACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGAt                                                                              <  1:3536824/93‑1 (MQ=255)

            ccGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATg                                                                             <  1:363091/92‑1 (MQ=255)

            aCGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATg                                                                             <  1:363092/93‑1 (MQ=255)

            aCGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATg                                                                             <  2:1559222/93‑1 (MQ=255)

             cGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATgg                                                                            <  1:1032390/93‑1 (MQ=255)

              gCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGt                                                                           >  1:206461/1‑93 (MQ=255)

                cAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCa                                                                         >  1:1086027/1‑93 (MQ=255)

                cAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCa                                                                         <  1:3296264/93‑1 (MQ=255)

                cAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCa                                                                         >  2:3298448/1‑93 (MQ=255)

                 aaTGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAg                                                                        >  1:4177734/1‑93 (MQ=255)

                      cGACAAACACCGCCAGACCAACGGCGTCCAGCACGGGCAACATCCATTTGGGTAAGCGTCTTGGCTGGTGCACCAGCACGATTGTCAGCATGc                                                                   <  2:26954/93‑1 (MQ=255)

                      cGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGc                                                                   >  2:1627073/1‑93 (MQ=255)

                       gACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCt                                                                  <  2:3310138/93‑1 (MQ=255)

                       gACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCt                                                                  <  1:3008484/93‑1 (MQ=255)

                        aCAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTg                                                                 <  1:1092087/93‑1 (MQ=255)

                         cAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTgg                                                                >  2:2138358/1‑93 (MQ=255)

                          aaaCACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGt                                                               <  2:2529632/93‑1 (MQ=255)

                           aaCACCGCCATACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTg                                                              >  2:3057676/1‑93 (MQ=255)

                            acacCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGa                                                             <  2:4307065/93‑1 (MQ=255)

                            acacCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGa                                                             >  1:1428322/1‑93 (MQ=255)

                             cacCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGAc                                                            <  1:1288993/93‑1 (MQ=255)

                              cccGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGAcc                                                           <  1:1964876/92‑1 (MQ=255)

                               ccGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCa                                                          <  1:3091731/93‑1 (MQ=255)

                               ccGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCa                                                          <  1:121617/93‑1 (MQ=255)

                               ccGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCa                                                          <  2:1568178/93‑1 (MQ=255)

                                cGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCAt                                                         >  2:144591/1‑93 (MQ=255)

                                cGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCAt                                                         <  1:980208/93‑1 (MQ=255)

                                 gCCAGACCAACGGCGTGCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCAtt                                                        <  1:3689420/93‑1 (MQ=255)

                                 gCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCAtt                                                        <  1:138138/93‑1 (MQ=255)

                                 gCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCAtt                                                        >  1:3637796/1‑93 (MQ=255)

                                  ccAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTg                                                       >  1:1612471/1‑93 (MQ=255)

                                   cAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGc                                                      >  2:645054/1‑93 (MQ=255)

                                    aGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCa                                                     >  1:55790/1‑93 (MQ=255)

                                     gACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCaa                                                    >  1:2381568/1‑93 (MQ=255)

                                      aCCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAAc                                                   <  2:4126565/93‑1 (MQ=255)

                                      aCCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAAc                                                   >  1:2539810/1‑93 (MQ=255)

                                        cAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGa                                                 <  2:2501887/93‑1 (MQ=255)

                                         caCGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGAc                                                <  2:1076454/92‑1 (MQ=255)

                                         aaCGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGAc                                                >  2:169623/1‑93 (MQ=255)

                                           cGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCa                                              <  2:1658583/93‑1 (MQ=255)

                                             gCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGa                                            <  2:4279858/93‑1 (MQ=255)

                                              cGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTTCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGAt                                           <  1:62813/93‑1 (MQ=255)

                                              cGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGAt                                           <  1:62812/93‑1 (MQ=255)

                                               gTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATc                                          <  1:549190/93‑1 (MQ=255)

                                               gTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATc                                          <  1:32464/93‑1 (MQ=255)

                                                 ccAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCgg                                        <  2:3374715/93‑1 (MQ=255)

                                                 ccAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCgg                                        <  2:4121456/93‑1 (MQ=255)

                                                 ccAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCgg                                        <  1:240738/93‑1 (MQ=255)

                                                  cAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGt                                       >  2:2670984/1‑93 (MQ=255)

                                                   aGCCCCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGCCCATTGCAGCGACCAGATCGGTg                                      <  2:3898498/93‑1 (MQ=255)

                                                   aGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTCCACCAGCACGCTGGTCAGCATGTTGGTGACCATTGCAACGACCAGATCGATg                                      >  1:4023047/1‑93 (MQ=255)

                                                    gCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTgg                                     >  2:4544062/1‑93 (MQ=255)

                                                       ccGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATTGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGAt                                  <  2:4533477/93‑1 (MQ=255)

                                                        cGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATc                                 <  1:1719101/93‑1 (MQ=255)

                                                          gCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCtt                               <  1:342840/93‑1 (MQ=255)

                                                          gCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCtt                               <  1:462963/93‑1 (MQ=255)

                                                            aaCATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTc                             >  1:4133718/1‑93 (MQ=255)

                                                            aaCATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTc                             <  2:1331068/93‑1 (MQ=255)

                                                                tCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCAccc                         >  2:3558165/1‑93 (MQ=255)

                                                                tCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCAccc                         <  2:3909721/93‑1 (MQ=255)

                                                                tCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCAccc                         >  1:159328/1‑93 (MQ=255)

                                                                tCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCAccc                         <  2:4695621/93‑1 (MQ=255)

                                                                tCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCAccc                         >  1:351355/1‑93 (MQ=255)

                                                                      ttGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATa                   <  1:1630215/93‑1 (MQ=255)

                                                                      tgggTAAGCGTCTTGGCGGGTGCACCAGCACGATGGTCAGCATGCGGGTCACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATa                   <  1:2258851/91‑1 (MQ=255)

                                                                        ggTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGGCCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATAcc                 >  1:4283923/1‑93 (MQ=255)

                                                                        ggTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATAcc                 <  2:2030497/93‑1 (MQ=255)

                                                                         gTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCg                <  2:3121277/93‑1 (MQ=255)

                                                                           aaGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCggg              <  1:2233948/93‑1 (MQ=255)

                                                                           aaGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCggg              >  1:854157/1‑93 (MQ=255)

                                                                            aGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGc             >  1:4028116/1‑93 (MQ=255)

                                                                            aGCGTCTGGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATAGGTGGGATCTTTCACCCAAAATACCGGGc             <  2:1306766/93‑1 (MQ=255)

                                                                               gTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGt          >  1:1863205/1‑93 (MQ=255)

                                                                               gTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGt          <  2:525044/93‑1 (MQ=255)

                                                                               gTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGt          <  2:525045/93‑1 (MQ=255)

                                                                                tCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTg         >  2:2512351/1‑93 (MQ=255)

                                                                                    ggctggtGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATcc     <  1:219803/93‑1 (MQ=255)

                                                                                     gctggtGCACCAGCACGATGGTCAGGATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCa    <  1:3410386/93‑1 (MQ=255)

                                                                                     gctggtGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGGAACGACCAGATCGGTGGGATCTTTCCCCCAAAATACCGGGCCGTGATCCa    <  2:2922327/93‑1 (MQ=255)

                                                                                     gctggtGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCa    >  1:2212204/1‑93 (MQ=255)

                                                                                      ctggtGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAg   <  2:2817765/93‑1 (MQ=255)

                                                                                       tggtGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAgc  <  2:1372312/93‑1 (MQ=255)

AAGGCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGCGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAGC  >  NC_000913/177296‑177475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`