BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,612,901	T→C	V25A (GTG→GCG)	yneJ →	putative transcriptional regulator LYSR‑type

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,612,901	0	T	C	100.0%	419.1 / NA	131	V25A (GTG→GCG)	yneJ	putative transcriptional regulator LYSR‑type
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (65/66); total (65/66)

Only 100 of 136 total aligned reads displayed.

CACGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGTGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGTT  >  NC_000913/1612811‑1612990

cACGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAgcgc                                                                                         <  1:1752834/93‑1 (MQ=255)

 aCGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCa                                                                                        <  1:4305877/93‑1 (MQ=255)

 aCGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCa                                                                                        <  1:240626/93‑1 (MQ=255)

  cGAATCGAGAGTGCTATGTATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCAt                                                                                       <  1:3325835/93‑1 (MQ=255)

  cGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCAt                                                                                       <  2:948082/93‑1 (MQ=255)

  cGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCAt                                                                                       >  1:3935301/1‑93 (MQ=255)

  cGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCAt                                                                                       >  1:683944/1‑93 (MQ=255)

     aTCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCTGTTGCCGAAGCTTGCACCATAACCCAGGCTGCAGCAAAAGCCCATcgc                                                                                    >  2:3360657/1‑93 (MQ=255)

     aTCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATcgc                                                                                    >  1:2784229/1‑93 (MQ=255)

     aTCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATcgc                                                                                    >  1:2678211/1‑93 (MQ=255)

     aTCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATcgc                                                                                    <  2:1724942/93‑1 (MQ=255)

       cGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGt                                                                                  <  1:3827659/93‑1 (MQ=255)

       cGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGt                                                                                  <  1:3932117/93‑1 (MQ=255)

         agaATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGc                                                                                >  1:2402547/1‑93 (MQ=255)

          gaATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGcc                                                                               >  1:2631323/1‑93 (MQ=255)

          gaATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGcc                                                                               >  1:2748443/1‑93 (MQ=255)

           aaTGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCg                                                                              >  1:1422629/1‑93 (MQ=255)

           aaTGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCg                                                                              <  1:3635831/93‑1 (MQ=255)

            aTGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGt                                                                             >  2:3333106/1‑93 (MQ=255)

            aTGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGt                                                                             >  2:4434902/1‑93 (MQ=255)

                tATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGaa                                                                         >  2:3550523/1‑93 (MQ=255)

                tATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGaa                                                                         <  1:3434128/93‑1 (MQ=255)

                tATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGaa                                                                         >  2:3550521/1‑93 (MQ=255)

                  tGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAAtc                                                                       <  1:4082369/93‑1 (MQ=255)

                   ggATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAAtct                                                                      >  2:4008877/1‑93 (MQ=255)

                      tCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCAc                                                                   >  1:4395731/1‑93 (MQ=255)

                      tCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCAc                                                                   >  1:3489336/1‑93 (MQ=255)

                      tCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCAc                                                                   >  2:3143899/1‑93 (MQ=255)

                       cTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCGGTCGAATCTCACt                                                                  >  1:2818304/1‑93 (MQ=255)

                         gACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAc                                                                <  2:4159921/93‑1 (MQ=255)

                         gACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAc                                                                >  2:1193329/1‑93 (MQ=255)

                         gACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAc                                                                <  2:382578/93‑1 (MQ=255)

                          aCCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAcc                                                               <  1:491751/93‑1 (MQ=255)

                           cccAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAccc                                                              <  1:2543307/93‑1 (MQ=255)

                           cccAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAccc                                                              <  2:2566946/93‑1 (MQ=255)

                             cAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGt                                                            >  1:475109/1‑93 (MQ=255)

                              aaCTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTc                                                           <  1:3441716/93‑1 (MQ=255)

                              aaCTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTc                                                           <  1:3064225/93‑1 (MQ=255)

                              aaCTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTc                                                           >  1:4088078/1‑93 (MQ=255)

                                 tGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTgc                                                        >  2:668273/1‑93 (MQ=255)

                                 tGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTgc                                                        >  1:3834429/1‑93 (MQ=255)

                                 tGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTgc                                                        <  2:1355958/93‑1 (MQ=255)

                                 tGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGCCGAATCTCACTACCCGTCTgc                                                        >  1:3834430/1‑93 (MQ=255)

                                   gagaTGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTgcgc                                                      >  1:1891769/1‑93 (MQ=255)

                                    agaTGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGcc                                                     >  1:1383359/1‑93 (MQ=255)

                                    agaTGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGcc                                                     >  1:4363006/1‑93 (MQ=255)

                                     gaTGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCa                                                    >  2:2755875/1‑93 (MQ=255)

                                       tGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGc                                                  >  2:228212/1‑93 (MQ=255)

                                       tGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGc                                                  <  1:1798800/93‑1 (MQ=255)

                                       tGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGc                                                  >  2:3075882/1‑93 (MQ=255)

                                       tGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGc                                                  >  2:394249/1‑93 (MQ=255)

                                           cAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTGGAATCTCACTACCCGTCTGCGCCAGCTGGa                                              <  2:3104004/93‑1 (MQ=255)

                                             aCGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGaaa                                            >  2:2079072/1‑93 (MQ=255)

                                              cgcgGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAAc                                           <  2:3954101/93‑1 (MQ=255)

                                               gcgGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACa                                          <  2:4738656/93‑1 (MQ=255)

                                                  gTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGaa                                       >  1:1403284/1‑93 (MQ=255)

                                                   ttGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAAc                                      <  1:1693223/93‑1 (MQ=255)

                                                   ttGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAAc                                      <  1:1693222/93‑1 (MQ=255)

                                                   ttGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAAc                                      <  1:2343107/93‑1 (MQ=255)

                                                   ttGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAAc                                      >  1:3602035/1‑93 (MQ=255)

                                                    tGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACt                                     <  2:3476595/93‑1 (MQ=255)

                                                     gCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTg                                    <  2:2658200/93‑1 (MQ=255)

                                                       cGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTggg                                  <  1:2399643/93‑1 (MQ=255)

                                                        gAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTgggg                                 >  1:4641765/1‑93 (MQ=255)

                                                        gAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTgggg                                 >  2:4436866/1‑93 (MQ=255)

                                                         gaGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCAATACCCGTCTGCGAAAGCTGGAAACAGAACTggggg                                <  1:849137/92‑1 (MQ=255)

                                                          aGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGt                               >  2:4535599/1‑93 (MQ=255)

                                                           gCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTATCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGtt                              <  2:2978106/93‑1 (MQ=255)

                                                           gCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCTGTCTGCGCCAGCTGGAAACAGAACTGGGGGtt                              >  2:1353864/1‑93 (MQ=255)

                                                           gCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGtt                              >  1:4316479/1‑93 (MQ=255)

                                                           gCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGtt                              >  1:1236862/1‑93 (MQ=255)

                                                           gCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGtt                              >  2:1519458/1‑93 (MQ=255)

                                                           gCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGtt                              >  2:1353865/1‑93 (MQ=255)

                                                             tGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGa                            <  2:2343367/93‑1 (MQ=255)

                                                             tGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGa                            >  2:4346957/1‑93 (MQ=255)

                                                               gcaggaTAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATc                          <  1:1190035/93‑1 (MQ=255)

                                                               gcagcaTAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATc                          <  2:1305803/93‑1 (MQ=255)

                                                                 agcaTAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTg                        >  2:3948478/1‑93 (MQ=255)

                                                                   caTAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGtt                      <  1:3898587/93‑1 (MQ=255)

                                                                    aTAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGttt                     <  1:2240130/93‑1 (MQ=255)

                                                                     tAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTa                    >  1:1775779/1‑93 (MQ=255)

                                                                     tAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTa                    <  2:2735423/93‑1 (MQ=255)

                                                                      aaCCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTAt                   >  2:316813/1‑93 (MQ=255)

                                                                       aCCCAGGCTTCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTAtt                  <  2:366097/93‑1 (MQ=255)

                                                                       aCCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTAtt                  <  2:188759/93‑1 (MQ=255)

                                                                        cccAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCTAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTc                 <  1:2954254/93‑1 (MQ=255)

                                                                        cccAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTc                 <  1:1127322/93‑1 (MQ=255)

                                                                        cccAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTc                 <  2:4683164/93‑1 (MQ=255)

                                                                         ccAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTcg                <  2:3023138/93‑1 (MQ=255)

                                                                          cAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTcgc               >  2:802631/1‑93 (MQ=255)

                                                                           aGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTcgcg              >  2:333062/1‑93 (MQ=255)

                                                                              cTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCgaga           >  2:1242026/1‑93 (MQ=255)

                                                                               tGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGaa          <  1:444355/93‑1 (MQ=255)

                                                                                gcagcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAAt         <  2:2183009/93‑1 (MQ=255)

                                                                                 cagcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATc        <  2:60285/93‑1 (MQ=255)

                                                                                 cagcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATc        <  2:3707632/93‑1 (MQ=255)

                                                                                 cagcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATc        >  2:326379/1‑93 (MQ=255)

                                                                                  agcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCa       <  1:4662431/93‑1 (MQ=255)

                                                                                    caAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGc     <  2:3023336/93‑1 (MQ=255)

                                                                                       aaGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGtt  <  2:53405/93‑1 (MQ=255)

CACGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGTGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGTT  >  NC_000913/1612811‑1612990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`