Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,662,601 T→C A27A (GCT→GCC b1591 → putative oxidoreductase component

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,662,6010TC99.2% 411.0 / NA 130A27A (GCT→GCCb1591putative oxidoreductase component
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (65/63);  total (67/63)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 143 total aligned reads displayed.

GCACATTTCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGC  >  NC_000913/1662509‑1662690
                                                                                            |                                                                                         
gCACATTTCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCt                                                                                           >  1:2144572/1‑93 (MQ=255)
    aTTTCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCag                                                                                       >  2:2519976/1‑93 (MQ=255)
    aTTTCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCag                                                                                       >  1:3941908/1‑93 (MQ=255)
     tttCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCaga                                                                                      <  2:2217098/93‑1 (MQ=255)
      ttCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCAagag                                                                                     <  2:1936662/93‑1 (MQ=255)
       tCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCagaga                                                                                    <  1:1415102/93‑1 (MQ=255)
       tCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCagaga                                                                                    <  1:1445344/93‑1 (MQ=255)
          ggATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTg                                                                                 >  1:3351908/1‑93 (MQ=255)
          ggATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTg                                                                                 >  1:3825291/1‑93 (MQ=255)
          ggATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTg                                                                                 >  2:2737247/1‑93 (MQ=255)
          ggATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTg                                                                                 <  1:3933667/93‑1 (MQ=255)
          ggATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTg                                                                                 >  1:2471106/1‑93 (MQ=255)
             tGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCgg                                                                              >  1:1506948/1‑93 (MQ=255)
             tGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCgg                                                                              <  2:827893/93‑1 (MQ=255)
              gTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGa                                                                             <  2:3857026/93‑1 (MQ=255)
                 aGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGc                                                                          <  1:2101088/93‑1 (MQ=255)
                 aGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGc                                                                          <  1:3488718/93‑1 (MQ=255)
                   gAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCg                                                                        >  1:4252277/1‑93 (MQ=255)
                    aaTGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGc                                                                       >  2:563506/1‑93 (MQ=255)
                     aTGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCa                                                                      >  2:58548/1‑93 (MQ=255)
                     aTGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGCTGGGCGCGCTGTTTTATTAAGCCCCAGAGAGCGCGGAAGCCGcc                                                                      >  1:1843341/1‑92 (MQ=255)
                       gACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCAcc                                                                    <  1:3601619/93‑1 (MQ=255)
                        aCCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACct                                                                   >  2:6710/1‑93 (MQ=255)
                         cccATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACctc                                                                  >  2:2131317/1‑93 (MQ=255)
                           cATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTg                                                                >  2:3965969/1‑93 (MQ=255)
                           cATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTg                                                                >  1:2636246/1‑93 (MQ=255)
                            aTTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTgg                                                               <  2:514992/93‑1 (MQ=255)
                             tttttCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGt                                                              <  1:312832/93‑1 (MQ=255)
                                ttCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGc                                                           >  1:28962/1‑93 (MQ=255)
                                   acaGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGt                                                        >  2:1120008/1‑93 (MQ=255)
                                   acaGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGt                                                        >  1:4083919/1‑93 (MQ=255)
                                    caGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTa                                                       <  2:495993/93‑1 (MQ=255)
                                     aGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTAc                                                      <  1:4119827/93‑1 (MQ=255)
                                     aGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGAGCGGAAGACGCACCTCTGGTTCCGGCAc                                                      >  1:985123/1‑93 (MQ=255)
                                      gCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACt                                                     >  2:3290492/1‑93 (MQ=255)
                                      gCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGAGGTACt                                                     >  2:874459/1‑93 (MQ=255)
                                       gaaGATAATGTTTCTGTCGCGGCGCGGGTGTTGGGCGCGCTGTTTTAGTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTc                                                    <  1:1744952/92‑1 (MQ=255)
                                         aGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGCGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCAc                                                  >  2:2919717/1‑93 (MQ=255)
                                          gATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCAcc                                                 <  2:3120226/93‑1 (MQ=255)
                                          gATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCAcc                                                 <  2:934829/93‑1 (MQ=255)
                                           aTAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCa                                                >  1:1511674/1‑93 (MQ=255)
                                            tAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGCAGCAGCACCTCTGGTTGCGGTACTCAcctg                                               >  2:1293872/1‑91 (MQ=255)
                                            tAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAg                                               >  1:3383624/1‑93 (MQ=255)
                                            tAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAg                                               <  1:4155781/93‑1 (MQ=255)
                                            tAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAg                                               >  1:3172787/1‑93 (MQ=255)
                                             aaTTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGt                                              <  2:4282263/93‑1 (MQ=255)
                                             aaTTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGt                                              >  2:3203747/1‑93 (MQ=255)
                                             aaTTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGt                                              >  2:479911/1‑93 (MQ=255)
                                               tttttCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGa                                            <  1:257192/93‑1 (MQ=255)
                                               tttttCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGa                                            <  1:2694911/93‑1 (MQ=255)
                                               tttttCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGa                                            <  1:884209/93‑1 (MQ=255)
                                               tttttCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGa                                            <  1:1261846/93‑1 (MQ=255)
                                                tttcCTGTCGGGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGAc                                           <  2:1906007/93‑1 (MQ=255)
                                                    cTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCt                                       >  1:1194315/1‑93 (MQ=255)
                                                     tGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTg                                      <  2:1295557/93‑1 (MQ=255)
                                                      gTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTgg                                     <  2:3101829/93‑1 (MQ=255)
                                                      gTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTgg                                     >  2:3982295/1‑93 (MQ=255)
                                                       tCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTggg                                    >  2:4605654/1‑93 (MQ=255)
                                                       tCGCGGCGCGCGGGTGGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCTGTACTCACCAGTGACGGCTggg                                    <  2:2988638/93‑1 (MQ=255)
                                                        cgcgGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGa                                   <  2:3999757/93‑1 (MQ=255)
                                                           ggcgCGCGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAAc                                <  1:1802768/93‑1 (MQ=255)
                                                            gcgcgcGTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACt                               <  1:1354761/93‑1 (MQ=255)
                                                              gcgcgTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCa                             >  1:137988/1‑93 (MQ=255)
                                                                gcgTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGt                           <  2:1026395/93‑1 (MQ=255)
                                                                gcgTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGt                           >  1:707101/1‑93 (MQ=255)
                                                                gcgTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGt                           >  1:488116/1‑93 (MQ=255)
                                                                gcgTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGt                           <  2:4113047/93‑1 (MQ=255)
                                                                gcgTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGt                           <  2:645901/93‑1 (MQ=255)
                                                                gcgTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGt                           <  2:945312/93‑1 (MQ=255)
                                                                 cgTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTg                          <  1:1218785/93‑1 (MQ=255)
                                                                 cgTGTTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTg                          <  1:3141008/93‑1 (MQ=255)
                                                                  gtgtTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTgg                         >  2:3781232/1‑93 (MQ=255)
                                                                   tgtTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGc                        >  1:2014955/1‑93 (MQ=255)
                                                                   tgtTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGc                        >  1:3584749/1‑93 (MQ=255)
                                                                    gtTGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGcc                       <  1:4063633/93‑1 (MQ=255)
                                                                     ttGGGCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCct                      >  2:276445/1‑93 (MQ=255)
                                                                       gggCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCctct                    <  1:2194379/93‑1 (MQ=255)
                                                                        ggCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTa                   <  2:1509715/93‑1 (MQ=255)
                                                                        ggCGCGCTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTa                   >  2:4393691/1‑93 (MQ=255)
                                                                           gcgcTGTTTTATTACGCCCCAGATAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCa                <  1:1325273/93‑1 (MQ=255)
                                                                           gcgcTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCa                <  1:2951846/93‑1 (MQ=255)
                                                                            cgcTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAg               >  1:2860871/1‑93 (MQ=255)
                                                                             gcTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGa              <  1:1717959/93‑1 (MQ=255)
                                                                             gcTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGa              >  1:1923001/1‑93 (MQ=255)
                                                                             gcTGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGGTGCGGTACTTACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGa              >  2:437957/1‑93 (MQ=255)
                                                                               tGTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAg            >  1:3103397/1‑93 (MQ=255)
                                                                                gTTTTATTACTCCGGAGAGAGTGCGGAAGCGTCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGc           <  2:237731/93‑1 (MQ=255)
                                                                                gTTTTATTACGCTCCAGAGAGTGCGGCAGCCGCACCTCTGGTTGCGGAACTTACCAGTGACTGCTGGGAAAGTCAGTGGCCTCTACCAGAAGc           >  2:4487601/1‑93 (MQ=255)
                                                                                gTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGCAACTCAGTGGCCTCTACCAGAAGc           >  2:1995829/1‑93 (MQ=255)
                                                                                gTTTTATTACGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGc           <  2:237730/93‑1 (MQ=255)
                                                                                   ttattaCGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTc        <  2:1559660/93‑1 (MQ=255)
                                                                                    tattgCGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCa       <  1:3830868/93‑1 (MQ=255)
                                                                                    tatcaCGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCATCa       <  1:975803/93‑1 (MQ=255)
                                                                                     attaCGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCAt      >  2:458327/1‑93 (MQ=255)
                                                                                     attaCGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCAt      >  1:2756878/1‑93 (MQ=255)
                                                                                      ttaCGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCAtt     <  2:359491/93‑1 (MQ=255)
                                                                                       taCGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTa    <  2:3968998/93‑1 (MQ=255)
                                                                                       taCGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTa    >  1:3628228/1‑93 (MQ=255)
                                                                                       taCGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTa    <  2:3968999/93‑1 (MQ=255)
                                                                                         cGCCCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAgc  <  1:3144827/93‑1 (MQ=255)
                                                                                            |                                                                                         
GCACATTTCAGGATGTTAGGAATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGC  >  NC_000913/1662509‑1662690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: