BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,664,091	T→C	S271S (AGT→AGC)	b1592 →	putative chloride channel

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,664,091	0	T	C	100.0%	366.6 / NA	111	S271S (AGT→AGC)	b1592	putative chloride channel
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (64/47); total (64/47)

Only 100 of 116 total aligned reads displayed.

TGCGCTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGTCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACGG  >  NC_000913/1664001‑1664180

tGCGCTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGcct                                                                                         >  2:879269/1‑93 (MQ=255)

 gcgcTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGcctc                                                                                        <  1:3506462/93‑1 (MQ=255)

   gcTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCaa                                                                                      >  1:2687060/1‑93 (MQ=255)

   gcTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCaa                                                                                      <  1:3318052/93‑1 (MQ=255)

    cTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCaaa                                                                                     >  2:2837262/1‑93 (MQ=255)

     tGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAACCTCAAAc                                                                                    >  1:1361221/1‑93 (MQ=255)

       aTTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACtt                                                                                  <  1:1518621/93‑1 (MQ=255)

        ttATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTg                                                                                 <  2:3520560/93‑1 (MQ=255)

        ttATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTg                                                                                 >  1:4195870/1‑93 (MQ=255)

         tATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTgc                                                                                <  1:2292983/93‑1 (MQ=255)

          aTCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTgcg                                                                               <  2:1791681/93‑1 (MQ=255)

          aTCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTgcg                                                                               <  2:1791680/93‑1 (MQ=255)

          aTCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTgcg                                                                               >  1:694479/1‑93 (MQ=255)

             aGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTTcgcct                                                                            >  2:3978468/1‑92 (MQ=255)

             aGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGcgccg                                                                            >  1:1129765/1‑93 (MQ=255)

              gTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGcgccgc                                                                           >  2:4371997/1‑93 (MQ=255)

              gTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGCGGATTTGTGAGCCTCAAACTTGcgccgc                                                                           >  1:1584699/1‑93 (MQ=255)

                aCAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGccc                                                                         <  1:3553632/93‑1 (MQ=255)

                 cAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCt                                                                        <  1:1698902/93‑1 (MQ=255)

                  aGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTg                                                                       >  1:177497/1‑93 (MQ=255)

                    gtgtGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGc                                                                     >  1:1718376/1‑93 (MQ=255)

                      gtgCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCaa                                                                   <  1:548583/93‑1 (MQ=255)

                       tgCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCATGCCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAAc                                                                  <  1:4534098/93‑1 (MQ=255)

                          tGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTgg                                                               >  1:4178679/1‑93 (MQ=255)

                          tGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTgg                                                               <  1:3690658/93‑1 (MQ=255)

                           ggCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGGCCTGGCAACTGGc                                                              >  2:3324100/1‑93 (MQ=255)

                           ggCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGc                                                              >  2:3324099/1‑93 (MQ=255)

                              aGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACt                                                           >  2:1187838/1‑93 (MQ=255)

                              aGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACt                                                           >  2:4160893/1‑93 (MQ=255)

                               ggTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTa                                                          >  2:49949/1‑93 (MQ=255)

                               ggTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTAGCAACTGGCACTa                                                          >  2:1149296/1‑93 (MQ=255)

                                  cTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGc                                                       <  1:1815388/93‑1 (MQ=255)

                                    gtgCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCgg                                                     >  2:102093/1‑93 (MQ=255)

                                    gtgCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCgg                                                     <  1:4430803/93‑1 (MQ=255)

                                    gtgCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCgg                                                     <  2:1734567/93‑1 (MQ=255)

                                     tgCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCggg                                                    >  1:1014177/1‑93 (MQ=255)

                                     tgCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCggg                                                    >  2:2423496/1‑93 (MQ=255)

                                      gCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGt                                                   <  2:1706763/93‑1 (MQ=255)

                                       cGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGtt                                                  <  2:3776291/93‑1 (MQ=255)

                                       cGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGtt                                                  <  1:3565490/93‑1 (MQ=255)

                                         gACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGa                                                >  2:693564/1‑93 (MQ=255)

                                         gACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGa                                                >  2:693563/1‑93 (MQ=255)

                                          aCCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGAt                                               <  2:1461141/93‑1 (MQ=255)

                                          aCCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGAt                                               >  1:121815/1‑93 (MQ=255)

                                          aCCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGAt                                               >  1:2531779/1‑93 (MQ=255)

                                           ccACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATc                                              <  2:235995/93‑1 (MQ=255)

                                           ccACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATc                                              >  1:3501601/1‑93 (MQ=255)

                                            cACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCg                                             >  2:4366256/1‑93 (MQ=255)

                                             aCTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAACCTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGt                                            >  2:4536558/1‑93 (MQ=255)

                                              cTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTg                                           <  2:4537824/93‑1 (MQ=255)

                                               tgttgtTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTgg                                          <  2:2089595/93‑1 (MQ=255)

                                               tgttgtTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTgg                                          <  2:1006697/93‑1 (MQ=255)

                                               tgttgtTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTgg                                          >  1:4257252/1‑93 (MQ=255)

                                               tgttgtTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTgg                                          <  1:2070217/93‑1 (MQ=255)

                                                  tgtgAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTc                                       <  1:3207620/93‑1 (MQ=255)

                                                   gttAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCt                                      >  1:1128804/1‑93 (MQ=255)

                                                    ttAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTg                                     >  1:242055/1‑93 (MQ=255)

                                                       aCGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCtt                                  <  1:1222342/93‑1 (MQ=255)

                                                       aCGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCtt                                  >  2:1431738/1‑93 (MQ=255)

                                                       aCGTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCtt                                  >  1:1148887/1‑93 (MQ=255)

                                                         gTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTc                                >  1:3347897/1‑93 (MQ=255)

                                                         gTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTc                                >  1:1943899/1‑93 (MQ=255)

                                                         gTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTc                                >  1:1336714/1‑93 (MQ=255)

                                                         gTTAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTc                                >  1:1943902/1‑93 (MQ=255)

                                                          ttAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTcc                               >  2:4631508/1‑93 (MQ=255)

                                                          ttAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTcc                               >  1:3849074/1‑93 (MQ=255)

                                                           tAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTccc                              <  2:3161928/93‑1 (MQ=255)

                                                           tAATGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTccc                              <  1:774190/93‑1 (MQ=255)

                                                            aaTGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCt                             <  2:1766009/93‑1 (MQ=255)

                                                             aTGAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTcccag                            >  1:3681290/1‑91 (MQ=255)

                                                              agAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGt                           <  1:3890485/92‑1 (MQ=255)

                                                               gAACGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGtt                          >  1:1285893/1‑93 (MQ=255)

                                                                 aCGCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTca                        >  2:421970/1‑93 (MQ=255)

                                                                   gCCTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTcacc                      >  2:1310779/1‑92 (MQ=255)

                                                                     cTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACAcc                    <  2:4257138/93‑1 (MQ=255)

                                                                     cTGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACAcc                    >  1:682140/1‑93 (MQ=255)

                                                                      tGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCt                   >  1:1302108/1‑93 (MQ=255)

                                                                      tGTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCt                   >  1:3100925/1‑93 (MQ=255)

                                                                       gTCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTg                  <  1:4129348/93‑1 (MQ=255)

                                                                        tCATCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGc                 >  1:1079757/1‑93 (MQ=255)

                                                                          aTCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAg               >  1:4010794/1‑93 (MQ=255)

                                                                           tCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAgt              >  2:4648906/1‑93 (MQ=255)

                                                                           tCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAgt              >  2:851295/1‑93 (MQ=255)

                                                                           tCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAgt              >  1:1563759/1‑93 (MQ=255)

                                                                           tCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAgt              >  2:4262878/1‑93 (MQ=255)

                                                                           tCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCAAACCTGCAgt              >  1:507519/1‑93 (MQ=255)

                                                                           tCGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGATGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAgt              >  2:4550890/1‑93 (MQ=255)

                                                                            cGTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAgtg             <  2:4659573/93‑1 (MQ=255)

                                                                             gTGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAgtgt            >  1:2055749/1‑93 (MQ=255)

                                                                              tGGATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGtgtg           >  1:2147098/1‑93 (MQ=255)

                                                                               ggATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTgg          <  2:3493728/93‑1 (MQ=255)

                                                                               ggATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTgg          <  1:2079424/93‑1 (MQ=255)

                                                                                gATTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTggg         <  2:1515072/93‑1 (MQ=255)

                                                                                 aTTTGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTgggg        >  2:4737506/1‑93 (MQ=255)

                                                                                  tttGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGc       >  1:3839207/1‑93 (MQ=255)

                                                                                  tttGTGAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGc       >  1:1077924/1‑93 (MQ=255)

                                                                                    tgtgAGCCTCAAACTTGCGCCGCTCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTACTTTCCCTGTTCACACCTGCAGTGTGGGGCaa     <  2:3377159/93‑1 (MQ=255)

                                                                                    tgtgAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCaa     <  2:212228/93‑1 (MQ=255)

                                                                                     gtgAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAAc    <  2:2198656/93‑1 (MQ=255)

                                                                                       gAGCCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACgg  >  1:3229951/1‑93 (MQ=255)

TGCGCTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGTCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACGG  >  NC_000913/1664001‑1664180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`