BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,672,562	T→C	L209P (CTG→CCG)	b1601 →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,672,562	0	T	C	100.0%	344.2 / NA	108	L209P (CTG→CCG)	b1601	putative transport protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (47/61); total (47/61)

Only 100 of 112 total aligned reads displayed.

GGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAA  >  NC_000913/1672473‑1672649

ggTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGt                                                                                      >  1:3622042/1‑93 (MQ=255)

   tGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGc                                                                                   >  1:1389190/1‑93 (MQ=255)

   tGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGc                                                                                   <  1:4120521/93‑1 (MQ=255)

    gAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGcc                                                                                  <  1:2221812/93‑1 (MQ=255)

      aGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTg                                                                                <  2:3522365/93‑1 (MQ=255)

      aGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTg                                                                                <  1:1140940/93‑1 (MQ=255)

       gggATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCtcg                                                                               >  2:4556001/1‑91 (MQ=255)

       gggATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTgg                                                                               <  1:4593972/93‑1 (MQ=255)

        ggATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTggg                                                                              >  2:933404/1‑93 (MQ=255)

        ggATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTggg                                                                              <  2:1332144/93‑1 (MQ=255)

        ggATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTggg                                                                              <  2:1479675/93‑1 (MQ=255)

         gATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGc                                                                             >  1:868097/1‑93 (MQ=255)

           tGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGa                                                                           <  1:1980760/93‑1 (MQ=255)

           tGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGa                                                                           <  1:3171913/93‑1 (MQ=255)

                  gATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTcgc                                                                    >  1:2251545/1‑93 (MQ=255)

                  gATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTcgc                                                                    >  1:2251546/1‑93 (MQ=255)

                  gATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTcgc                                                                    <  1:325844/93‑1 (MQ=255)

                   aTTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTcgcc                                                                   >  2:360323/1‑93 (MQ=255)

                   aTTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTcgcc                                                                   >  1:3424170/1‑93 (MQ=255)

                    ttCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTcgccg                                                                  >  2:1181645/1‑93 (MQ=255)

                       aaCGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCGGCAc                                                               >  2:3676884/1‑93 (MQ=255)

                       aaCGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCAc                                                               >  2:1849453/1‑93 (MQ=255)

                        aCGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACt                                                              >  2:1187590/1‑93 (MQ=255)

                           tGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGa                                                           <  2:4311835/93‑1 (MQ=255)

                             cGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATg                                                         >  1:2035215/1‑93 (MQ=255)

                              gATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGt                                                        >  2:3243185/1‑93 (MQ=255)

                              gATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGt                                                        >  2:3266402/1‑93 (MQ=255)

                              gATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGt                                                        <  1:3713539/93‑1 (MQ=255)

                               aTTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATgct                                                       >  2:1470084/1‑91 (MQ=255)

                                ttGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttc                                                      <  1:930333/93‑1 (MQ=255)

                                ttGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttc                                                      <  2:3273530/93‑1 (MQ=255)

                                ttGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttc                                                      <  1:2355270/93‑1 (MQ=255)

                                 tGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcg                                                     >  2:691209/1‑93 (MQ=255)

                                   aCAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgct                                                   >  1:3645485/1‑93 (MQ=255)

                                   aCAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCCCACTCGATGttcgct                                                   <  2:4691146/93‑1 (MQ=255)

                                    cAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgctt                                                  >  1:3885114/1‑93 (MQ=255)

                                     aGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgcttc                                                 <  1:764836/93‑1 (MQ=255)

                                     aGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgcttc                                                 >  2:3838957/1‑93 (MQ=255)

                                     aGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgcttc                                                 <  1:564711/93‑1 (MQ=255)

                                       tgtTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGttcgcttcgc                                               <  2:4073380/93‑1 (MQ=255)

                                         tttCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTcgcttcgctt                                             <  2:2793254/93‑1 (MQ=255)

                                         tttCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTcgcttcgctt                                             <  2:392433/93‑1 (MQ=255)

                                          ttCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCttt                                            <  1:2805880/93‑1 (MQ=255)

                                          ttCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCttt                                            <  1:4472931/93‑1 (MQ=255)

                                           tctcATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCtttt                                           <  1:3417716/93‑1 (MQ=255)

                                             tcATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGt                                         >  2:2639684/1‑93 (MQ=255)

                                               aTTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCt                                       <  1:4018029/93‑1 (MQ=255)

                                               aTTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCt                                       >  1:1502549/1‑93 (MQ=255)

                                                ttATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTg                                      <  1:4081761/93‑1 (MQ=255)

                                                ttATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTg                                      <  2:179238/93‑1 (MQ=255)

                                                ttATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTg                                      <  2:4385988/93‑1 (MQ=255)

                                                 tATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTgg                                     <  1:79975/93‑1 (MQ=255)

                                                 tATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTgg                                     <  2:591551/93‑1 (MQ=255)

                                                   tCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTgggg                                   <  1:1572265/93‑1 (MQ=255)

                                                   tCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTgggg                                   <  1:3006535/93‑1 (MQ=255)

                                                     tGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGAt                                 <  2:725525/93‑1 (MQ=255)

                                                     tGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGAt                                 <  1:3332626/93‑1 (MQ=255)

                                                     tGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGAt                                 <  1:3537443/93‑1 (MQ=255)

                                                      ggTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGAtt                                <  1:2879745/93‑1 (MQ=255)

                                                      ggTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGAtt                                >  1:1909729/1‑93 (MQ=255)

                                                       gTGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTg                               <  1:2432452/93‑1 (MQ=255)

                                                        tGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCTCTTCGCTTTTGTCTGGGGATTGc                              >  2:3574371/1‑93 (MQ=255)

                                                        tGCTGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGc                              <  1:3220236/93‑1 (MQ=255)

                                                           tGAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTgg                           >  1:4558099/1‑93 (MQ=255)

                                                            gAAAACAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGc                          >  1:1768920/1‑93 (MQ=255)

                                                             aaaaCAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGcc                         >  2:3624845/1‑93 (MQ=255)

                                                             aaaaCAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGcc                         >  1:2707786/1‑93 (MQ=255)

                                                               aaCAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCtt                       >  2:3780647/1‑93 (MQ=255)

                                                               aaCAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCtt                       <  1:4359264/93‑1 (MQ=255)

                                                               aaCAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCtt                       >  1:1397475/1‑93 (MQ=255)

                                                                aCAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCttt                      <  2:1634902/93‑1 (MQ=255)

                                                                aCAGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCttt                      <  1:391009/93‑1 (MQ=255)

                                                                  aGCCATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTgc                    >  1:906318/1‑93 (MQ=255)

                                                                   gCCATCAGCATCATCACCGGCCCGGTAGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGCTTGCTGGCCTTTgcc                   >  1:2789708/1‑92 (MQ=255)

                                                                   gCCATCAGCATCATCACCGGCCCAGACGACTGGGCGCTGCTCGCAGCCCTCGATGGTCGCTTCGTGTTTGTCTGGGGATTCCTCGCCTTTgcg                   >  2:2170558/1‑93 (MQ=255)

                                                                     cATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCt                 <  2:2208775/93‑1 (MQ=255)

                                                                     cATCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCt                 >  1:3022471/1‑93 (MQ=255)

                                                                      aTCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTGGGCGCACTCTATGGTCGCTTCGCTCTCGTCTGGGGATTGCTGGCCTTTGCGCtt                >  1:2811554/1‑93 (MQ=255)

                                                                      aTCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCtt                >  1:2811553/1‑93 (MQ=255)

                                                                      aTCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCtt                <  2:1501436/93‑1 (MQ=255)

                                                                      aTCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCtt                <  2:1501435/93‑1 (MQ=255)

                                                                      aTCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCtt                >  1:4630885/1‑93 (MQ=255)

                                                                      aTCAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCtt                <  2:389212/93‑1 (MQ=255)

                                                                        cAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTaa              <  1:4354387/93‑1 (MQ=255)

                                                                        cAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTaa              <  2:4747609/93‑1 (MQ=255)

                                                                        cAGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTaa              <  2:442359/93‑1 (MQ=255)

                                                                         aGCATCATCACCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAAt             <  2:991087/93‑1 (MQ=255)

                                                                             tcatccCCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACa         <  1:3504760/93‑1 (MQ=255)

                                                                             tcatcaCCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACa         <  1:3504759/93‑1 (MQ=255)

                                                                                 caCCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTCATTACAtaca     >  2:2174148/1‑90 (MQ=255)

                                                                                 caCCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTATATccc     <  1:722825/93‑1 (MQ=255)

                                                                                 caCCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATccc     <  2:480142/93‑1 (MQ=255)

                                                                                  cccGGCACGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCg    <  1:960924/92‑1 (MQ=255)

                                                                                  aCCGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCg    >  1:566553/1‑93 (MQ=255)

                                                                                   ccGGCCCGGTCGCCTGGGTGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGa   >  1:428753/1‑93 (MQ=255)

                                                                                   ccGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGa   >  1:4581483/1‑93 (MQ=255)

                                                                                    cGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGaa  <  1:2247167/93‑1 (MQ=255)

                                                                                    cGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGaa  <  1:2940928/93‑1 (MQ=255)

                                                                                    cGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGaa  <  2:3710504/93‑1 (MQ=255)

                                                                                    cGGCCCGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGaa  <  1:2247168/93‑1 (MQ=255)

GGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAA  >  NC_000913/1672473‑1672649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`