Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,677,885 A→G Y102C (TAT→TGT)  b1605 → putative arginine/ornithine antiporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,677,8850AG98.4% 407.1 / ‑2.9 129Y102C (TAT→TGT) b1605putative arginine/ornithine antiporter
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (66/60);  total (68/61)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01

Only 100 of 130 total aligned reads displayed.

TTACCTATGCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTATCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCTGGCAATCGATA  >  NC_000913/1677795‑1677973
                                                                                          |                                                                                        
ttACCTATGCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTc                                                                                        >  2:3139871/1‑93 (MQ=255)
 tACCTATGCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCt                                                                                       <  1:110180/93‑1 (MQ=255)
   acTATGCCCGCGAAGGGGTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGCCTCCTGTCTgg                                                                                     >  2:1536501/2‑93 (MQ=255)
    cTATGCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGt                                                                                    <  2:786302/93‑1 (MQ=255)
    cTATGCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGt                                                                                    >  2:4491885/1‑93 (MQ=255)
     tATGCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTg                                                                                   >  1:1299390/1‑93 (MQ=255)
     tATGCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTg                                                                                   >  2:4275656/1‑93 (MQ=255)
     tATGCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTg                                                                                   >  2:2196191/1‑93 (MQ=255)
      aTGCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGa                                                                                  <  2:1929032/93‑1 (MQ=255)
       tGCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGAt                                                                                 >  1:449528/1‑93 (MQ=255)
        gCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATc                                                                                <  2:2441584/93‑1 (MQ=255)
        gCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATc                                                                                <  2:192345/93‑1 (MQ=255)
        gCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATc                                                                                <  1:4626787/93‑1 (MQ=255)
        gCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATc                                                                                <  1:4626788/93‑1 (MQ=255)
          ccGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGGTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGt                                                                              <  1:4571927/93‑1 (MQ=255)
           cgcgAATGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGtt                                                                             <  2:1155058/93‑1 (MQ=255)
            gcgAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGttt                                                                            <  1:2823116/93‑1 (MQ=255)
             cgAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGtttt                                                                           >  2:4579842/1‑93 (MQ=255)
               aaGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGtttttt                                                                         >  1:423985/1‑93 (MQ=255)
               aaGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTATCTGGTGATCGtttttt                                                                         >  2:4022222/1‑93 (MQ=255)
                aGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTc                                                                        <  2:2301029/93‑1 (MQ=255)
                aGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTc                                                                        >  2:4732831/1‑93 (MQ=255)
                aGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTc                                                                        >  1:3960173/1‑93 (MQ=255)
                 gggTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTcc                                                                       <  2:3782550/93‑1 (MQ=255)
                 gggTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTcc                                                                       >  2:3388592/1‑93 (MQ=255)
                 gggTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTcc                                                                       <  1:4489748/93‑1 (MQ=255)
                   gTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCcgc                                                                     >  1:1859581/1‑93 (MQ=255)
                      tGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGtt                                                                  <  1:4684046/93‑1 (MQ=255)
                      tGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGtt                                                                  <  2:1523084/93‑1 (MQ=255)
                       ggCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTa                                                                 <  2:2830939/93‑1 (MQ=255)
                            gCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCtt                                                            >  2:3363311/1‑93 (MQ=255)
                            gCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCtt                                                            <  1:2995373/93‑1 (MQ=255)
                              tAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCtttt                                                          <  1:4311762/93‑1 (MQ=255)
                              tAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCtttt                                                          >  2:3627530/1‑93 (MQ=255)
                              tAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCtttt                                                          >  1:2560777/1‑93 (MQ=255)
                              tAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCtttt                                                          >  1:2281297/1‑93 (MQ=255)
                               aaTCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCttttt                                                         <  1:3266703/93‑1 (MQ=255)
                               aaTCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCttttt                                                         >  1:2698198/1‑93 (MQ=255)
                               aaTCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCttttt                                                         >  1:2004455/1‑93 (MQ=255)
                               aaTCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCttttt                                                         >  1:1843641/1‑93 (MQ=255)
                                aTCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCtttttt                                                        >  1:3771178/1‑93 (MQ=255)
                                   ggCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACg                                                     >  2:3557078/1‑93 (MQ=255)
                                   ggCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACg                                                     >  2:622251/1‑93 (MQ=255)
                                    gCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACgg                                                    >  2:4500595/1‑93 (MQ=255)
                                     cTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGa                                                   <  2:4143259/93‑1 (MQ=255)
                                      ttttGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGac                                                  >  1:1573809/1‑93 (MQ=255)
                                      ttttGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGac                                                  >  2:2368826/1‑93 (MQ=255)
                                      ttttGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTCTTTCCGCGTTAAGCTTTTTTACGGac                                                  <  1:922544/93‑1 (MQ=255)
                                        ttGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGacac                                                <  1:2047906/93‑1 (MQ=255)
                                        ttGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGacac                                                <  2:2082404/93‑1 (MQ=255)
                                           ttCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGcc                                             <  2:768346/93‑1 (MQ=255)
                                           ttCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGcc                                             <  1:643828/93‑1 (MQ=255)
                                            tCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCg                                            <  2:710786/93‑1 (MQ=255)
                                            tCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACACCg                                            <  1:1492745/93‑1 (MQ=255)
                                              cGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGa                                          <  2:1431159/93‑1 (MQ=255)
                                               gCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGaa                                         >  1:3271773/1‑93 (MQ=255)
                                                cATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAAt                                        >  1:3004676/1‑93 (MQ=255)
                                                cATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAAt                                        <  1:862323/93‑1 (MQ=255)
                                                cATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAAt                                        <  2:1443985/93‑1 (MQ=255)
                                                 aTGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAAtt                                       <  2:1027201/93‑1 (MQ=255)
                                                 aTGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAAtt                                       <  2:2180225/93‑1 (MQ=255)
                                                  tGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTg                                      >  2:2787915/1‑93 (MQ=255)
                                                  tGGGGATACTGGCTGTGCACAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTg                                      <  1:4358605/93‑1 (MQ=255)
                                                    gggATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTgcg                                    >  2:587148/1‑93 (MQ=255)
                                                    gggATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTgcg                                    >  1:1355555/1‑93 (MQ=255)
                                                    gggATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTgcg                                    <  2:3810034/93‑1 (MQ=255)
                                                      gATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGcc                                  <  1:392380/93‑1 (MQ=255)
                                                      gATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGcc                                  <  2:4455975/93‑1 (MQ=255)
                                                        tACTGGCTGTGCGCAGTCATCGCCAACGTCTACTGTCTGGTGATCGTTTTTTCAGCGCTAAGCTTTTTTACGGACACCCCGGTACTgcgacag                                >  2:380406/1‑89 (MQ=255)
                                                          cTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGtt                              <  1:1830135/93‑1 (MQ=255)
                                                          cTGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGtt                              >  1:2207278/1‑93 (MQ=255)
                                                           tGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGttt                             <  1:2486205/93‑1 (MQ=255)
                                                           tGGCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGttt                             <  2:1256877/93‑1 (MQ=255)
                                                            tgCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTg                            <  1:770697/92‑1 (MQ=255)
                                                             gCTGTGCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTgg                           >  2:1148446/1‑93 (MQ=255)
                                                                gtgCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGa                        >  1:1014303/1‑93 (MQ=255)
                                                                 tgCGCAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGAt                       <  2:4660948/93‑1 (MQ=255)
                                                                    gcAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGt                    >  1:2948040/1‑93 (MQ=255)
                                                                    gcAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGt                    >  1:2014730/1‑93 (MQ=255)
                                                                    gcAGTCATCGCCAACGTCTCCTGTCTGGGGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGaagta                    >  1:1170580/1‑89 (MQ=255)
                                                                     cAGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTa                   <  2:3349569/93‑1 (MQ=255)
                                                                      aGTCATCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTaa                  <  2:6865/93‑1 (MQ=255)
                                                                        tCATCGCCAACGTCTCCTTTCTGGGGATCGTTTTTTCCGCCTTAATCTTTTTTACGGACACGCCGCCATTGCGCCTTTTTGGCGATGGAAAtc                >  2:3561610/1‑92 (MQ=255)
                                                                        tCATCGCCAACGTCTCCTATCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATa                <  2:2935010/93‑1 (MQ=255)
                                                                          ctCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCTGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATAcc              <  2:1799266/92‑1 (MQ=255)
                                                                          aTCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATAcc              <  1:3168957/93‑1 (MQ=255)
                                                                           tCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCt             >  2:2496121/1‑93 (MQ=255)
                                                                           tCGCCAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCt             >  1:2032524/1‑93 (MQ=255)
                                                                              ccAACGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCTGGc          >  2:1286904/1‑93 (MQ=255)
                                                                                atcGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCTGGCaa        >  2:4184367/3‑93 (MQ=255)
                                                                                 aCGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCTGGCAAt       >  2:1282263/1‑93 (MQ=255)
                                                                                 aCGTCTCCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCTGGCAAt       >  2:2185638/1‑93 (MQ=255)
                                                                                  cGTCTCCTGTCTGGTGATCGTTTATTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCTGGCAATc      <  2:2584419/93‑1 (MQ=255)
                                                                                    tctcCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCTGGCAATCGa    >  2:2960307/1‑93 (MQ=255)
                                                                                    tctcCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCTGGCAATCGa    >  1:3082961/1‑93 (MQ=255)
                                                                                     ctcCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCTGGCAATCGAt   <  2:2760405/93‑1 (MQ=255)
                                                                                     ctcCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCTGGCAATCGAt   >  1:435407/1‑93 (MQ=255)
                                                                                     ctcCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCTGGCAATCGAt   <  2:1665406/93‑1 (MQ=255)
                                                                                      tcCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCTGGCAATCGATa  <  2:539296/93‑1 (MQ=255)
                                                                                      tcCTGTCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCTGGCAATCGATa  >  2:1872770/1‑93 (MQ=255)
                                                                                          |                                                                                        
TTACCTATGCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTATCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCTGGCAATCGATA  >  NC_000913/1677795‑1677973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: