BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,684,672	A→G	intergenic (‑60/+83)	fumC ← / ← fumA	fumarase C/fumarase A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,684,672	0	A	G	100.0%	416.0 / NA	125	intergenic (‑60/+83)	fumC/fumA	fumarase C/fumarase A
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (50/75); total (50/75)

Only 100 of 129 total aligned reads displayed.

TCGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTAGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTATTTC  >  NC_000913/1684582‑1684761

tCGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGc                                                                                         >  2:779606/1‑93 (MQ=255)

tCGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGc                                                                                         >  2:236500/1‑93 (MQ=255)

tCGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGc                                                                                         >  2:236499/1‑93 (MQ=255)

tCGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGc                                                                                         <  2:1287009/93‑1 (MQ=255)

 cGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCt                                                                                        <  1:235195/93‑1 (MQ=255)

  gAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTc                                                                                       <  1:1095798/93‑1 (MQ=255)

   aaTCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCa                                                                                      >  2:4250316/1‑93 (MQ=255)

   aaTCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCa                                                                                      >  2:3819017/1‑93 (MQ=255)

   aaTCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCa                                                                                      >  1:3286166/1‑93 (MQ=255)

    aTCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCAc                                                                                     >  1:3892930/1‑93 (MQ=255)

     tCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACt                                                                                    >  2:3525785/1‑93 (MQ=255)

     tCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACt                                                                                    >  1:887774/1‑93 (MQ=255)

     tCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACt                                                                                    >  2:2007486/1‑93 (MQ=255)

       tttttCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACtta                                                                                  <  2:1796360/93‑1 (MQ=255)

       tttttCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACtta                                                                                  <  2:1560563/93‑1 (MQ=255)

        ttttCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACttat                                                                                 >  2:1435398/1‑93 (MQ=255)

               tGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTAc                                                                          >  2:1352295/1‑93 (MQ=255)

               tGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTAc                                                                          <  1:2634429/93‑1 (MQ=255)

               tGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTAc                                                                          >  1:3457504/1‑93 (MQ=255)

               tGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTAc                                                                          >  2:3244002/1‑93 (MQ=255)

               tGCGTACTGTACTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTAc                                                                          <  1:167554/93‑1 (MQ=255)

                gCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTAcc                                                                         <  2:3029980/93‑1 (MQ=255)

                 cGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCa                                                                        <  1:867538/93‑1 (MQ=255)

                 cGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCa                                                                        <  1:334376/93‑1 (MQ=255)

                 cGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCa                                                                        <  1:3109390/93‑1 (MQ=255)

                   tACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCAtt                                                                      >  1:2960321/1‑93 (MQ=255)

                   tACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCAtt                                                                      >  2:1675744/1‑93 (MQ=255)

                    tcTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCAttt                                                                     <  1:4065325/92‑1 (MQ=255)

                    aCTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCAttt                                                                     <  2:4388402/93‑1 (MQ=255)

                     cTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTg                                                                    <  1:4114123/93‑1 (MQ=255)

                        tATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATa                                                                 >  1:484584/1‑93 (MQ=255)

                         aTTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATaa                                                                <  1:2832134/93‑1 (MQ=255)

                            cATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACaa                                                             >  1:4545191/1‑93 (MQ=255)

                            cATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACaa                                                             <  1:1964462/93‑1 (MQ=255)

                            cATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACaa                                                             >  1:126442/1‑93 (MQ=255)

                            cATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACaa                                                             >  1:2680000/1‑93 (MQ=255)

                             aTGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACaaa                                                            <  2:1869562/93‑1 (MQ=255)

                             aTGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACaaa                                                            >  2:3707308/1‑93 (MQ=255)

                              tGACCTGCTCCTCTCCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAAt                                                           <  2:414663/93‑1 (MQ=255)

                              tGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAAt                                                           <  1:3495061/93‑1 (MQ=255)

                              tGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAAt                                                           <  2:168436/93‑1 (MQ=255)

                                cccTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGt                                                         <  2:161443/92‑1 (MQ=255)

                                 ccTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGtt                                                        <  1:621864/93‑1 (MQ=255)

                                 ccTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGtt                                                        <  1:2253386/93‑1 (MQ=255)

                                 ccTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGtt                                                        <  2:4513940/93‑1 (MQ=255)

                                   tGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTg                                                      >  2:2773348/1‑93 (MQ=255)

                                   tGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTg                                                      <  2:1355860/93‑1 (MQ=255)

                                    gCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTgg                                                     <  1:291444/93‑1 (MQ=255)

                                    gCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTgg                                                     >  1:445261/1‑93 (MQ=255)

                                    gCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTgg                                                     >  1:445092/1‑93 (MQ=255)

                                    gCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTgg                                                     <  1:1242802/93‑1 (MQ=255)

                                     ctcctcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGt                                                    <  1:4666059/93‑1 (MQ=255)

                                     ctcctcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGt                                                    <  2:3536137/93‑1 (MQ=255)

                                      tcctcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTc                                                   <  2:2676805/93‑1 (MQ=255)

                                       cctcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCt                                                  <  2:4602182/93‑1 (MQ=255)

                                        ctcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCtt                                                 >  1:958510/1‑93 (MQ=255)

                                         tcACCTGATTATTTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCttt                                                <  1:2813500/93‑1 (MQ=255)

                                         tcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCttt                                                <  1:133195/93‑1 (MQ=255)

                                         tcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCttt                                                >  2:1434261/1‑93 (MQ=255)

                                          cACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTc                                               <  2:1579021/93‑1 (MQ=255)

                                           aCCTTATTAATTTGTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTATCATTTGATAACAAATGTTTGGTCTTTCg                                              <  1:3375706/93‑1 (MQ=255)

                                            ccTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGt                                             <  2:4716308/93‑1 (MQ=255)

                                              tGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGc                                           >  1:2039978/1‑93 (MQ=255)

                                               gATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGcc                                          <  1:4412770/93‑1 (MQ=255)

                                                    aTTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTa                                     >  1:4429763/1‑93 (MQ=255)

                                                      tttttCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTaaa                                   <  2:1929949/93‑1 (MQ=255)

                                                       ttttCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTaaaa                                  <  2:3454093/93‑1 (MQ=255)

                                                        tttctttcTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTaaaaa                                 <  2:2988798/93‑1 (MQ=255)

                                                        tttctttcTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTaaaaa                                 <  1:2279920/93‑1 (MQ=255)

                                                        tttctttcTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTaaaaa                                 <  1:3074443/93‑1 (MQ=255)

                                                        tttctttcTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTAGATAACAAATGTTTGGTCTTTCGTGCCATGTaaaaa                                 <  1:1326605/93‑1 (MQ=255)

                                                           ttttctGTTTTGCTTTCGTTAAGCAACTTTTGGATCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAAc                              <  2:1019332/92‑1 (MQ=255)

                                                           tcttctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAAc                              <  2:2957969/91‑1 (MQ=255)

                                                            tttctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAAcc                             <  1:3212308/93‑1 (MQ=255)

                                                            tttctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAAcc                             <  1:949315/93‑1 (MQ=255)

                                                             ttctGTTTTGCTTTCGTTAAGCAGCTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCg                            <  1:1803645/93‑1 (MQ=255)

                                                              tctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGc                           >  1:3173755/1‑93 (MQ=255)

                                                                tGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGccc                         >  1:2350666/1‑93 (MQ=255)

                                                                 gTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGcccc                        >  1:4550784/1‑93 (MQ=255)

                                                                  ttttGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCg                       >  2:294284/1‑93 (MQ=255)

                                                                  ttttGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCg                       >  2:49989/1‑93 (MQ=255)

                                                                      gCTTTCGTTAAGCAGCGTTTGGCTCACTTATTATGTAGCATTTGATAACAAATGTTTGGTCGTTCGTGCCATGTAAAAAAACCGCCCCGAAgg                   <  1:688510/93‑1 (MQ=255)

                                                                      gCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAgg                   <  1:3604146/93‑1 (MQ=255)

                                                                       cTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAggg                  <  1:2439633/93‑1 (MQ=255)

                                                                          tCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGggcgg               >  2:3122266/1‑93 (MQ=255)

                                                                           cGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGggcggc              >  2:3126786/1‑93 (MQ=255)

                                                                            gTTAATCAAGTTGTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGct             <  1:568275/93‑1 (MQ=255)

                                                                            gTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGct             >  2:716413/1‑93 (MQ=255)

                                                                             ttAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGctc            <  1:2139686/93‑1 (MQ=255)

                                                                                aGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAGACCGCCCCGAAGGGCGGCTCTGt         <  2:4317492/93‑1 (MQ=255)

                                                                                aGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGt         >  1:2223017/1‑93 (MQ=255)

                                                                                aGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGt         >  1:2223014/1‑93 (MQ=255)

                                                                                 gCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGtt        <  1:850036/93‑1 (MQ=255)

                                                                                 gCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGtt        >  1:1091603/1‑93 (MQ=255)

                                                                                   aaCTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTa      <  1:1365941/93‑1 (MQ=255)

                                                                                   aaCTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTa      <  2:256805/93‑1 (MQ=255)

                                                                                    aCTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTAt     <  2:1048595/93‑1 (MQ=255)

                                                                                     cTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTAtt    <  2:2398232/93‑1 (MQ=255)

                                                                                       tttGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTATTTc  <  2:4090276/93‑1 (MQ=255)

                                                                                       tttGGCTCACTTATTATTTACCATTTGATAACAAATGTTGGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTATTTc  <  2:887774/93‑1 (MQ=255)

TCGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTAGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTATTTC  >  NC_000913/1684582‑1684761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`