BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,698,072	C→T	R232C (CGT→TGT)	malX →	MalX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,698,072	0	C	T	98.6%	483.2 / ‑5.1	139	R232C (CGT→TGT)	malX	MalX
Reads supporting (aligned to +/- strand): ref base C (0/2); new base T (57/80); total (57/82)
Fisher's exact test for biased strand distribution p-value = 5.13e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.31e-01

Only 100 of 143 total aligned reads displayed.

TGGCCGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAACGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCAA  >  NC_000913/1697982‑1698161

 ggCCGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTc                                                                                        <  1:3058030/93‑1 (MQ=255)

  gCCGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTATCGGTGAATGTct                                                                                       >  2:2148012/1‑93 (MQ=255)

   ccGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTctg                                                                                      >  1:4297761/1‑93 (MQ=255)

     gATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTctgct                                                                                    >  2:3479843/1‑93 (MQ=255)

      aTTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTctgctg                                                                                   >  2:1019682/1‑93 (MQ=255)

       ttttCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGt                                                                                  <  1:3602093/93‑1 (MQ=255)

       ttttCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGt                                                                                  <  1:758911/93‑1 (MQ=255)

            gCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCg                                                                             >  1:1530296/1‑93 (MQ=255)

            gCCATGGGTATACGCGACTAGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGACg                                                                             <  2:4219857/93‑1 (MQ=255)

            gCCATGGGAATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCTGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCg                                                                             >  1:2593807/1‑93 (MQ=255)

             gcATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGt                                                                            <  1:3740867/92‑1 (MQ=255)

             ccATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGt                                                                            >  2:2386192/1‑93 (MQ=255)

              cATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGtt                                                                           >  2:311954/1‑93 (MQ=255)

              cATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGtt                                                                           <  1:3028056/93‑1 (MQ=255)

               aTGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGttt                                                                          >  2:1993144/1‑93 (MQ=255)

               aTGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCAGttt                                                                          >  1:2502054/1‑93 (MQ=255)

                tGGGTATTAGCGGCTTGGGCCATATGATCAAAAGCGCGGGTGATTTCGGACCGATGCTGTTTGTTACCGGTGACTGTCTGCTGTTGCCGTTTg                                                                         >  1:1158042/1‑93 (MQ=255)

                tGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTg                                                                         >  2:925189/1‑93 (MQ=255)

                  ggTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGt                                                                       >  2:1057729/1‑93 (MQ=255)

                   gTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTc                                                                      <  1:3062229/93‑1 (MQ=255)

                    tATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCt                                                                     <  2:8678/93‑1 (MQ=255)

                      ttAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGc                                                                   >  1:2646752/1‑93 (MQ=255)

                      ttAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGc                                                                   >  1:4302327/1‑93 (MQ=255)

                       tAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCa                                                                  <  2:3425772/93‑1 (MQ=255)

                       tAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCa                                                                  >  2:3955261/1‑93 (MQ=255)

                         gCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATc                                                                >  2:3432756/1‑93 (MQ=255)

                         gCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATc                                                                >  2:2872363/1‑93 (MQ=255)

                         gCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATc                                                                <  1:1518698/93‑1 (MQ=255)

                            gCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATcact                                                             >  1:1296881/1‑92 (MQ=255)

                             cTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACAt                                                            >  1:1734698/1‑93 (MQ=255)

                              ttGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACAtt                                                           <  2:2763376/93‑1 (MQ=255)

                              ttGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGCACCGGTGAATGTCTGCTATTGACGTTAGGTCTGCATCACAtt                                                           >  2:4707834/1‑93 (MQ=255)

                               tGGTCCATATCATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCGCATTc                                                          <  2:2463696/93‑1 (MQ=255)

                               tGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTc                                                          <  2:2463695/93‑1 (MQ=255)

                               tGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTc                                                          <  1:2551083/93‑1 (MQ=255)

                                gggCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCt                                                         <  1:3484966/93‑1 (MQ=255)

                                 ggCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCtg                                                        <  1:3419953/93‑1 (MQ=255)

                                  gCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTTCTGTTGCCGTTTGGTCTGCATCACATTCtgg                                                       <  1:2317144/93‑1 (MQ=255)

                                   ccATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTTCCGGTGAATGTCTGTTGTTGCCGTTTGGTCTGCATTACATTCtggt                                                      <  2:3582338/93‑1 (MQ=255)

                                     atatGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCtggtgg                                                    >  2:1217466/1‑93 (MQ=255)

                                      tatGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGc                                                   >  2:2956157/1‑93 (MQ=255)

                                           tAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTaa                                              >  2:756039/1‑93 (MQ=255)

                                           tAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTaa                                              <  1:2607881/93‑1 (MQ=255)

                                             aaCAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAAtt                                            <  1:2446409/93‑1 (MQ=255)

                                             aaCAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAAtt                                            <  2:3332788/93‑1 (MQ=255)

                                             aaCAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAAtt                                            >  2:679403/1‑93 (MQ=255)

                                             aaCAGCGCGGGTGATTTCGGACCGATGCGGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAAtt                                            <  1:1014506/93‑1 (MQ=255)

                                              aCAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTc                                           >  2:4600539/1‑93 (MQ=255)

                                              aCAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTc                                           <  1:1236605/93‑1 (MQ=255)

                                                aGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCgt                                         >  1:398551/1‑92 (MQ=255)

                                                aGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGc                                         <  2:3772707/93‑1 (MQ=255)

                                                 gcgcGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCt                                        >  1:2082554/1‑93 (MQ=255)

                                                  cgcgGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCtt                                       <  2:2522400/93‑1 (MQ=255)

                                                  cgcgGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCtt                                       <  1:2528408/93‑1 (MQ=255)

                                                  cgcgGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCtt                                       <  2:3970827/93‑1 (MQ=255)

                                                   gcgGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCttt                                      <  1:899475/93‑1 (MQ=255)

                                                   gcgGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCttt                                      <  2:3217327/93‑1 (MQ=255)

                                                    cgGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTa                                     >  2:3166207/1‑93 (MQ=255)

                                                      ggTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTAcc                                   <  1:3809244/93‑1 (MQ=255)

                                                      ggTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTAcc                                   >  1:3679498/1‑93 (MQ=255)

                                                      ggTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTAcc                                   <  2:4310228/93‑1 (MQ=255)

                                                      ggTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTAcc                                   >  1:1862895/1‑93 (MQ=255)

                                                        tGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGa                                 <  2:249277/93‑1 (MQ=255)

                                                        tGATGTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGa                                 <  1:397761/93‑1 (MQ=255)

                                                           tttCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGc                              <  1:3149943/93‑1 (MQ=255)

                                                            ttCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCa                             <  1:987038/93‑1 (MQ=255)

                                                            ttCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCa                             <  2:1636677/93‑1 (MQ=255)

                                                             tCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGATGCAg                            <  1:4698149/93‑1 (MQ=255)

                                                              cGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAgg                           <  1:1288256/93‑1 (MQ=255)

                                                              cGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAgg                           <  2:2310906/93‑1 (MQ=255)

                                                              cGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCACTAATTCGCTTTACCGACGCAgg                           <  2:2989963/93‑1 (MQ=255)

                                                                gACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAggcg                         >  2:1331710/1‑93 (MQ=255)

                                                                gACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGGTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAggcg                         >  2:1527/1‑93 (MQ=255)

                                                                 gccGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAggcgg                        <  1:614898/92‑1 (MQ=255)

                                                                 aCCGATGCTGTTTGGTACCGGTGAATGTCTTCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAggcgg                        <  1:4498776/93‑1 (MQ=255)

                                                                 aCCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAggcgg                        >  1:9087/1‑93 (MQ=255)

                                                                   cGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCa                      >  1:4488988/1‑93 (MQ=255)

                                                                    gATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCAc                     >  2:160151/1‑93 (MQ=255)

                                                                     aTGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACg                    >  1:219160/1‑93 (MQ=255)

                                                                       gCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCa                  >  1:979985/1‑93 (MQ=255)

                                                                       gCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCa                  <  1:649438/93‑1 (MQ=255)

                                                                        cTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAg                 <  1:3445051/93‑1 (MQ=255)

                                                                         tGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCTGCACGCAgg                >  1:1297009/1‑93 (MQ=255)

                                                                          gTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGa               <  2:4197350/93‑1 (MQ=255)

                                                                           tttGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGaa              <  1:1370747/93‑1 (MQ=255)

                                                                             tGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCCCGCAGGAAGt            >  1:2519401/1‑93 (MQ=255)

                                                                             tGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGt            >  1:2991881/1‑93 (MQ=255)

                                                                             tGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGt            >  1:2991880/1‑93 (MQ=255)

                                                                             tGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGt            <  2:3422089/93‑1 (MQ=255)

                                                                              ggTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTc           <  1:752568/93‑1 (MQ=255)

                                                                               gTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCt          <  2:2192350/93‑1 (MQ=255)

                                                                               gTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCt          <  2:1120575/93‑1 (MQ=255)

                                                                                tACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTg         <  1:3485242/93‑1 (MQ=255)

                                                                                   cGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCgg      <  1:2856222/93‑1 (MQ=255)

                                                                                     gTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTc    >  1:2592118/1‑93 (MQ=255)

                                                                                      tGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCa   >  1:2774316/1‑93 (MQ=255)

                                                                                      tGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCa   <  1:1015694/93‑1 (MQ=255)

                                                                                       gAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCaa  >  1:392747/1‑93 (MQ=255)

                                                                                       gAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCaa  >  1:1931814/1‑93 (MQ=255)

                                                                                       gAATGTCTGCTGTTGCCGCTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCaa  >  1:2659377/1‑93 (MQ=255)

TGGCCGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAACGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCAA  >  NC_000913/1697982‑1698161

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`