BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,727,504	A→G	T132A (ACT→GCT)	lhr →	Lhr

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,727,504	0	A	G	99.0%	324.5 / ‑5.9	103	T132A (ACT→GCT)	lhr	Lhr
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (48/54); total (49/54)
Fisher's exact test for biased strand distribution p-value = 4.76e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 105 total aligned reads displayed.

GCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTACTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGATG  >  NC_000913/1727418‑1727593

gcAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCg                                                                                     <  2:1232291/93‑1 (MQ=255)

 cAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGa                                                                                    <  1:4125627/93‑1 (MQ=255)

  aaCTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGAt                                                                                   >  2:628420/1‑93 (MQ=255)

  aaCTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGAt                                                                                   >  2:3024671/1‑93 (MQ=255)

   aCTTGCAGATCCCGTTGAAGGGTATTGCCGATGCACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATa                                                                                  <  1:4520029/93‑1 (MQ=255)

   aCTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATa                                                                                  >  1:494539/1‑93 (MQ=255)

   aCTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATa                                                                                  <  1:1833537/93‑1 (MQ=255)

   aCTTGCAGATCCCG‑TGAAAGGTAATTCCGATTAACCGCGGCGGCCGCGCCAAACGGAAATTCATTTTCCCCGAAGGATCCGTGCTGGCGATAc                                                                                 <  2:4619082/93‑1 (MQ=255)

    cTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATAc                                                                                 <  2:1101942/93‑1 (MQ=255)

     ttGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACg                                                                                >  1:1615954/1‑93 (MQ=255)

        cAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCt                                                                             >  2:2969787/1‑93 (MQ=255)

         aGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTg                                                                            >  2:1216737/1‑93 (MQ=255)

            tCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGcac                                                                         <  1:1098522/93‑1 (MQ=255)

            tCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATAAGCCTGcac                                                                         >  2:2326650/1‑93 (MQ=255)

             cccGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGcaca                                                                        <  1:4726523/93‑1 (MQ=255)

             cccGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGcaca                                                                        >  2:3264862/1‑93 (MQ=255)

              ccGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAg                                                                       <  1:4277561/93‑1 (MQ=255)

              ccGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAg                                                                       <  1:3120328/93‑1 (MQ=255)

               cGTTGAAGGGTATTGCCGATGACCGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAgg                                                                      <  2:4393394/93‑1 (MQ=255)

               cGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAgg                                                                      <  1:1057843/93‑1 (MQ=255)

                gTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGa                                                                     <  1:388399/93‑1 (MQ=255)

                gTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGAGCCGTGCTGGCGATACGCCTGCAGAGGa                                                                     >  1:2899264/1‑93 (MQ=255)

                 ttGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGaa                                                                    >  2:2302805/1‑93 (MQ=255)

                 ttGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGaa                                                                    >  1:185848/1‑93 (MQ=255)

                  tGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAAc                                                                   >  1:1549863/1‑93 (MQ=255)

                   gAAGGGTATTGCCGATGAACGGCGGCGGCGCGGGGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTACTGGCGATACGCCTGCACCGGAACg                                                                  >  2:3734092/1‑93 (MQ=255)

                   gAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACg                                                                  >  2:314035/1‑93 (MQ=255)

                    aaGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAAGgc                                                                 >  1:349615/1‑93 (MQ=255)

                     aGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACgca                                                                >  1:3753459/1‑93 (MQ=255)

                     aGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACgca                                                                >  2:1489803/1‑93 (MQ=255)

                     aGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACgca                                                                <  1:1752515/93‑1 (MQ=255)

                      gggTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACgcag                                                               >  2:629345/1‑93 (MQ=255)

                      gggTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACgcag                                                               >  1:1447717/1‑93 (MQ=255)

                        gTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACgcagca                                                             >  2:3942615/1‑93 (MQ=255)

                          aTTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGGGGTACGCCTGCACAGGAACCGAGCaaa                                                           >  2:2990277/1‑93 (MQ=255)

                           ttGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAAc                                                          >  1:3732449/1‑93 (MQ=255)

                           ttGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAAc                                                          <  1:2786481/93‑1 (MQ=255)

                             gCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTc                                                        >  2:2977740/1‑93 (MQ=255)

                             gCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTc                                                        <  2:4319231/93‑1 (MQ=255)

                               cGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCAc                                                      <  1:1536664/93‑1 (MQ=255)

                               cGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCAc                                                      <  2:1238798/93‑1 (MQ=255)

                                gATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCAcc                                                     <  1:3129763/93‑1 (MQ=255)

                                gATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCAcc                                                     >  1:1523610/1‑93 (MQ=255)

                                 aTGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCAccc                                                    <  2:1235276/93‑1 (MQ=255)

                                   gAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTTGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAAAGCAGCACACTCACCCGt                                                  >  2:568543/1‑93 (MQ=255)

                                   gAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGt                                                  <  2:492247/93‑1 (MQ=255)

                                   gAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGt                                                  <  2:4278544/93‑1 (MQ=255)

                                     aCGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTaa                                                <  1:1409168/93‑1 (MQ=255)

                                     aCGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTaa                                                <  2:3884200/93‑1 (MQ=255)

                                       gtcggcggcgCGGCGAAACGGTAGTCTATCTTCGCGTAGGGATCCTTGCTGGCGTTACGTCTGCACTGGAACGTAGCTAACTCACCCGTAATc                                              >  2:4216398/3‑93 (MQ=255)

                                       ggcggcggcGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATc                                              <  2:671182/93‑1 (MQ=255)

                                        gcggcggcgCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATcc                                             >  1:4550162/1‑93 (MQ=255)

                                           gcggcgcggcGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATccgcc                                          <  1:1367968/93‑1 (MQ=255)

                                           gcggcgcggcGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATccgcc                                          <  2:1775626/93‑1 (MQ=255)

                                            cggcgcggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATccgccg                                         <  1:2186152/93‑1 (MQ=255)

                                            cggcgcggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATccgccg                                         <  2:1824611/93‑1 (MQ=255)

                                             ggcgcggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCgg                                        <  1:1718309/93‑1 (MQ=255)

                                             ggcgcggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCgg                                        >  2:1789249/1‑93 (MQ=255)

                                              gcgcggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGa                                       <  2:2967971/93‑1 (MQ=255)

                                               cgcggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGat                                      <  2:2954744/93‑1 (MQ=255)

                                                  ggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATAtt                                   >  2:1051689/1‑93 (MQ=255)

                                                  ggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATAtt                                   <  1:1769560/93‑1 (MQ=255)

                                                  ggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATAtt                                   <  1:910729/93‑1 (MQ=255)

                                                   gcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTc                                  <  2:3034515/93‑1 (MQ=255)

                                                   gcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTc                                  <  2:3506097/93‑1 (MQ=255)

                                                   gcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTc                                  >  1:96824/1‑93 (MQ=255)

                                                   gcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTc                                  >  2:2673696/1‑93 (MQ=255)

                                                    cgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCt                                 <  1:2888973/93‑1 (MQ=255)

                                                      aaaCGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTACTCCGCCGGATATTCTGa                               >  2:2168558/1‑93 (MQ=255)

                                                      aaaCGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGa                               >  2:2462883/1‑93 (MQ=255)

                                                       aaCGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGAt                              <  1:862956/93‑1 (MQ=255)

                                                         cGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATca                            <  2:1536484/93‑1 (MQ=255)

                                                          tgAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATcac                           >  2:123633/2‑93 (MQ=255)

                                                           gAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATcccc                          >  2:3831853/1‑93 (MQ=255)

                                                           gAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATcacc                          <  2:448452/93‑1 (MQ=255)

                                                           gAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATcacc                          >  2:3831854/1‑93 (MQ=255)

                                                            aaGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATcacca                         >  1:2430030/1‑93 (MQ=255)

                                                             aGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATcaccac                        <  1:2278623/93‑1 (MQ=255)

                                                             aGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATcaccac                        >  2:4613999/1‑93 (MQ=255)

                                                              gTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACcaca                       <  1:2221486/93‑1 (MQ=255)

                                                              gTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTAATCACcaca                       <  1:119594/93‑1 (MQ=255)

                                                              gTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGGAATCCGCCGGATATCCTGATCACcaca                       >  1:4207405/1‑93 (MQ=255)

                                                               tCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCacac                      <  1:1114254/93‑1 (MQ=255)

                                                               tCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCacac                      >  1:1641868/1‑93 (MQ=255)

                                                                 aaTCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACAccc                    <  2:3288011/93‑1 (MQ=255)

                                                                 aaTCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACAccc                    <  1:3024442/93‑1 (MQ=255)

                                                                 aaTCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACAccc                    >  2:2469083/1‑93 (MQ=255)

                                                                   tCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGa                  >  1:4369234/1‑93 (MQ=255)

                                                                   tCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGa                  >  1:1809469/1‑93 (MQ=255)

                                                                    cTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGaa                 <  2:2116095/93‑1 (MQ=255)

                                                                     ttCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAAt                >  1:4128214/1‑93 (MQ=255)

                                                                        gcgTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCAc             <  2:3731159/93‑1 (MQ=255)

                                                                         cgTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCAct            >  1:3181589/1‑93 (MQ=255)

                                                                          gTAGGGATCCGTGCTGGGGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCActc           <  1:434302/93‑1 (MQ=255)

                                                                          gTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCActc           >  1:682230/1‑93 (MQ=255)

                                                                            aGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGCATCACTCTa         >  1:2370623/1‑93 (MQ=255)

                                                                              ggATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATc       <  2:1008364/93‑1 (MQ=255)

                                                                               gATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAACCCGCCGGATATTCTGATCACCCCCCCCGAATCACTCTATCt      <  1:480723/93‑1 (MQ=255)

                                                                                 tCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGa    <  2:640136/93‑1 (MQ=255)

                                                                                   cGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGATg  <  1:923871/93‑1 (MQ=255)

GCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTACTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGATG  >  NC_000913/1727418‑1727593

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`