BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,729,644	T→C	M845T (ATG→ACG)	lhr →	Lhr

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,729,644	0	T	C	97.4%	479.6 / ‑1.4	155	M845T (ATG→ACG)	lhr	Lhr
Reads supporting (aligned to +/- strand): ref base T (3/1); new base C (79/71); total (82/73)
Fisher's exact test for biased strand distribution p-value = 6.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 168 total aligned reads displayed.

CTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTAT  >  NC_000913/1729554‑1729732

cTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGc                                                                                        >  1:2494670/1‑93 (MQ=255)

cTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGc                                                                                        <  1:758796/93‑1 (MQ=255)

 tCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGCTGTTTATGATCTTCCCGCACTGGTCGGTTTGAcgcg                                                                                       >  2:939562/1‑93 (MQ=255)

 tCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGAcgcg                                                                                       >  1:1867934/1‑93 (MQ=255)

  cAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGt                                                                                      <  1:4390149/93‑1 (MQ=255)

   aGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTc                                                                                     >  1:4070603/1‑93 (MQ=255)

    gggATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCCGCAAATTATTTATAATCTTCCCGCCCTGGAACGTTTGACGCGTCg                                                                                    >  2:3488296/1‑93 (MQ=255)

        tatCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTg                                                                                <  1:4460475/93‑1 (MQ=255)

          tCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGaa                                                                              <  2:300080/93‑1 (MQ=255)

          tCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGaa                                                                              >  2:4479354/1‑93 (MQ=255)

          tCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGaa                                                                              <  2:4317657/93‑1 (MQ=255)

           ccGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAAc                                                                             <  1:3553316/93‑1 (MQ=255)

            cGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACg                                                                            >  2:2611089/1‑93 (MQ=255)

             ggATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACgg                                                                           <  2:3467197/93‑1 (MQ=255)

               aTTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTg                                                                         <  2:1584508/93‑1 (MQ=255)

                ttttCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTgg                                                                        <  2:448571/93‑1 (MQ=255)

                 tttCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACggcggc                                                                       >  1:1422052/1‑93 (MQ=255)

                 tttCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGc                                                                       <  2:198114/93‑1 (MQ=255)

                 tttCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGc                                                                       <  2:3727241/93‑1 (MQ=255)

                  ttCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCg                                                                      >  2:1228525/1‑93 (MQ=255)

                    ccGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGaa                                                                    >  2:1452071/1‑93 (MQ=255)

                     cGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGANGNNTCGCCTGAACGGTGGCGaca                                                                   >  1:1606253/1‑91 (MQ=255)

                     cGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGaaa                                                                   >  1:4310890/1‑93 (MQ=255)

                      ggTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAAt                                                                  >  1:560338/1‑93 (MQ=255)

                       gTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAAtt                                                                 >  1:3152712/1‑93 (MQ=255)

                       gTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAAtt                                                                 >  1:3152713/1‑93 (MQ=255)

                        tCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTc                                                                <  2:1083542/93‑1 (MQ=255)

                         cATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCa                                                               >  1:2018353/1‑93 (MQ=255)

                         cATTCTCGAAACCCTACGCGAAGGTCTGCAAGAAGTTTATGATCTTCCCGCACTGGGACGTTTGTCGCGTCGCCTGAACGGTGGGGAAATTCa                                                               >  2:1035572/1‑93 (MQ=255)

                          aTTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAACTTCaa                                                              >  2:1513329/1‑93 (MQ=255)

                          aTTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCaa                                                              >  2:2285140/1‑93 (MQ=255)

                           ttCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCaaa                                                             >  2:3799909/1‑93 (MQ=255)

                            tctcGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAat                                                            <  1:2008802/93‑1 (MQ=255)

                            tctcGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGAAGCGTCGCCTGAACGGTGGCGAAATTCAAat                                                            <  1:3124044/93‑1 (MQ=255)

                                  aaCCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGa                                                      >  2:4657648/1‑93 (MQ=255)

                                  aaCCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGa                                                      >  2:4244197/1‑93 (MQ=255)

                                    cccTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATg                                                    >  1:1976639/1‑93 (MQ=255)

                                    cccTACGCGAATGGCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGCACGGTGGCGAAATTCAACTATCCGaat                                                    >  1:3305158/1‑91 (MQ=255)

                                     ccTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGt                                                   >  1:3562248/1‑93 (MQ=255)

                                        aCGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAAc                                                <  2:4286646/93‑1 (MQ=255)

                                         cgcgAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACg                                               <  2:2149135/93‑1 (MQ=255)

                                          gcgAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGa                                              >  2:3961240/1‑93 (MQ=255)

                                          gcgAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGa                                              <  1:1575712/93‑1 (MQ=255)

                                          gcgAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGa                                              <  1:4243357/93‑1 (MQ=255)

                                           cgAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGAc                                             >  1:2704416/1‑93 (MQ=255)

                                            gAATGTCTGCAAGATGTTTATGATCTTCCCGCCCTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGAcc                                            >  1:3667545/1‑93 (MQ=255)

                                            gAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGAcc                                            >  1:338601/1‑93 (MQ=255)

                                            gAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGAcc                                            >  1:2476253/1‑93 (MQ=255)

                                            gAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGAcc                                            <  1:3820666/93‑1 (MQ=255)

                                             aaagTCTGCAAGATGTATATGATCTTCCCGCACTGGAACGTTTGATGCGACGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCa                                           >  2:4214977/4‑93 (MQ=255)

                                             aaTGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCTGATGTAACGACCa                                           >  2:1247646/1‑93 (MQ=255)

                                              aTGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGAacac                                          >  2:2026969/1‑93 (MQ=255)

                                              aTGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCAc                                          <  1:4720238/93‑1 (MQ=255)

                                               tGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACt                                         >  1:1924556/1‑93 (MQ=255)

                                                gtttGCTAGATGTTTATGATCTTCCCGCACTGGAACGTCTGACGCGTCGCCTGTACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTa                                        <  2:4087201/90‑1 (MQ=255)

                                                gTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTa                                        <  1:2659616/93‑1 (MQ=255)

                                                 tCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTAc                                       <  1:3707103/93‑1 (MQ=255)

                                                 tCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAAAGACGACTAc                                       >  1:98180/1‑93 (MQ=255)

                                                   tGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGc                                     >  2:4350664/1‑93 (MQ=255)

                                                    gCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCTGATGTAACGACCACTACGcc                                    >  1:2676439/1‑93 (MQ=255)

                                                     cAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGccc                                   >  1:1481593/1‑93 (MQ=255)

                                                      aaGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGTACGGTGGCGAAATTCAAATATCCGATGTACCGACCACTACGcccc                                  >  2:622534/1‑92 (MQ=255)

                                                      aaGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCt                                  >  1:1244751/1‑93 (MQ=255)

                                                      aaGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCt                                  >  2:2386268/1‑93 (MQ=255)

                                                       aGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGATCGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTc                                 <  2:1647932/93‑1 (MQ=255)

                                                       aGATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTc                                 >  1:1064643/1‑93 (MQ=255)

                                                        gATGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCg                                >  2:3239364/1‑93 (MQ=255)

                                                         aTGTTTATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGc                               >  1:3012757/1‑93 (MQ=255)

                                                            tttATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCtt                            <  1:4213947/93‑1 (MQ=255)

                                                            tttATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCtt                            <  1:1181744/93‑1 (MQ=255)

                                                            tttATGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCtt                            >  2:1169875/1‑93 (MQ=255)

                                                                tGATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGc                        <  2:2840970/93‑1 (MQ=255)

                                                                 gATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGcc                       >  1:3466626/1‑93 (MQ=255)

                                                                 gATCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGcc                       >  1:447198/1‑93 (MQ=255)

                                                                   tCTTCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCcac                     <  1:129126/93‑1 (MQ=255)

                                                                    cTTCCCGCACTGGAACGTTTGACGCGTCGCCTGATCGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCcaca                    <  2:3939930/93‑1 (MQ=255)

                                                                     ttCCCGCACTGGAACGTTTGATGCGTCGCCTGAACGGTGGCGAAATTCAAATATCTGATGTAACGACAACTACGCCCCCACTTTTCTCCACaa                   >  1:3725430/1‑93 (MQ=255)

                                                                     ttCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACaa                   <  1:1014965/93‑1 (MQ=255)

                                                                     ttCCCGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACaa                   <  1:961832/93‑1 (MQ=255)

                                                                       cccGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGt                 <  2:2570323/93‑1 (MQ=255)

                                                                       cccGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGt                 >  1:713310/1‑93 (MQ=255)

                                                                        ccGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTACCGACCACTACGCCCTCGCCTTTCGCCACAAGtt                <  1:246257/93‑1 (MQ=255)

                                                                        ccGCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGtt                >  2:1070392/1‑93 (MQ=255)

                                                                          gCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTa              <  2:3839471/93‑1 (MQ=255)

                                                                          gCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTa              >  2:3791168/1‑93 (MQ=255)

                                                                          gCACTGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTa              >  1:3064184/1‑93 (MQ=255)

                                                                              tGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGt          >  1:3429100/1‑93 (MQ=255)

                                                                              tGGAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGt          <  2:824198/93‑1 (MQ=255)

                                                                               ggAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATcc                                                        <  1:2781510/46‑1 (MQ=255)

                                                                               ggAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATcc                                                        >  2:2781510/1‑46 (MQ=255)

                                                                                gAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGAGCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTc        <  2:4064575/93‑1 (MQ=255)

                                                                                gAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTGCGCCCTCGCCTTTCGCCACAAGTTTATTGTTc        <  2:593305/93‑1 (MQ=255)

                                                                                gAACGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTc        <  1:4051466/93‑1 (MQ=255)

                                                                                   cGTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGc     <  2:2258854/93‑1 (MQ=255)

                                                                                    gTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTTTTCGGCt    >  1:1508246/1‑93 (MQ=255)

                                                                                    gTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCt    <  1:181494/93‑1 (MQ=255)

                                                                                    gTTTGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCt    >  1:292403/1‑93 (MQ=255)

                                                                                     tttGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTa   >  1:568157/1‑93 (MQ=255)

                                                                                     tttGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTa   <  1:1025071/93‑1 (MQ=255)

                                                                                      ttGACGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTAt  >  2:293599/1‑93 (MQ=255)

CTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTAT  >  NC_000913/1729554‑1729732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`