BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	196,710	C→T	L55L (CTC→CTT)	yaeL →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	196,710	0	C	T	99.2%	459.1 / ‑5.5	131	L55L (CTC→CTT)	yaeL	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (58/72); total (58/73)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 134 total aligned reads displayed.

ATTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTCGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTCCG  >  NC_000913/196622‑196799

aTTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCa                                                                                       >  2:1739340/1‑93 (MQ=255)

  ttCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCAcc                                                                                     <  2:4484779/93‑1 (MQ=255)

  ttCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCAcc                                                                                     <  2:2046239/93‑1 (MQ=255)

     tGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGaa                                                                                  >  2:3059294/1‑93 (MQ=255)

     tGGGTTGCCCGGCGTTGTGGTGTTCGAGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGATCTGGCGGCGAACTGATAAGCTTGGCGCCGat                                                                                  >  1:4659199/1‑92 (MQ=255)

       ggTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAata                                                                                <  2:1689346/93‑1 (MQ=255)

       ggTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAata                                                                                <  2:4733818/93‑1 (MQ=255)

       ggTTGCCAGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTAATAAGCTTGGCACCGAata                                                                                <  1:79061/93‑1 (MQ=255)

          tGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGt                                                                             >  1:3700777/1‑93 (MQ=255)

           gCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGtt                                                                            <  1:1904925/93‑1 (MQ=255)

           gCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGtt                                                                            <  1:3158500/93‑1 (MQ=255)

            cccGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTa                                                                           <  2:1923392/93‑1 (MQ=255)

              cGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATc                                                                         >  2:2002305/1‑93 (MQ=255)

              cGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATc                                                                         <  1:864479/93‑1 (MQ=255)

              cGGCGTTGTGGTGTTCGCGTTGAGCGGTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATc                                                                         >  1:1331867/1‑93 (MQ=255)

               ggCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCg                                                                        >  2:339180/1‑93 (MQ=255)

                gCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGc                                                                       >  2:4534554/1‑93 (MQ=255)

                gCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGc                                                                       >  2:3399043/1‑93 (MQ=255)

                  gTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGccc                                                                     <  1:1988708/93‑1 (MQ=255)

                  gTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGccc                                                                     <  1:4475667/93‑1 (MQ=255)

                   ttGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCt                                                                    <  2:1878848/93‑1 (MQ=255)

                   ttGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCt                                                                    <  2:3857080/93‑1 (MQ=255)

                    tgtgGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTg                                                                   <  1:4381059/93‑1 (MQ=255)

                     gtggtgTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGa                                                                  >  2:4384407/1‑93 (MQ=255)

                     gtggtgTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGa                                                                  >  2:2901463/1‑93 (MQ=255)

                     gtggtgTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGa                                                                  >  1:4155305/1‑93 (MQ=255)

                     gtggtgTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGa                                                                  >  2:2901464/1‑93 (MQ=255)

                      tggtgTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGAt                                                                 <  2:1505537/93‑1 (MQ=255)

                       gatgtTCGCATTGAGCGTTTCTCAATAAGGTTTGGTAAGGCGAACTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATc                                                                <  1:4215291/91‑1 (MQ=255)

                        gtgtTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATcc                                                               >  2:770468/1‑93 (MQ=255)

                           ttCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGt                                                            >  2:1074389/1‑93 (MQ=255)

                            tCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGtt                                                           <  2:2615186/93‑1 (MQ=255)

                             cgcgTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTg                                                          >  1:2368364/1‑93 (MQ=255)

                              gcgTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTgg                                                         <  2:2147821/93‑1 (MQ=255)

                               cgTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTggg                                                        >  1:3738814/1‑93 (MQ=255)

                                gTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTgcgc                                                       >  1:2168045/1‑93 (MQ=255)

                                gTTGAGAGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGTCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGc                                                       <  1:4744345/93‑1 (MQ=255)

                                    aGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGtt                                                   >  2:842084/1‑93 (MQ=255)

                                     gCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTa                                                  >  1:247913/1‑93 (MQ=255)

                                       gTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATg                                                >  2:2107911/1‑93 (MQ=255)

                                         ttCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTc                                              >  2:2872579/1‑93 (MQ=255)

                                          tctcAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCa                                             >  2:4696592/1‑93 (MQ=255)

                                          tctcAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCa                                             >  2:4230842/1‑93 (MQ=255)

                                             cAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCaaaa                                          <  2:4053624/93‑1 (MQ=255)

                                             cAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCaaaa                                          <  1:1291271/93‑1 (MQ=255)

                                             cAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCaaaa                                          <  1:2454288/93‑1 (MQ=255)

                                             cAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCaaaa                                          <  1:1781077/93‑1 (MQ=255)

                                              aaTAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAAt                                         <  1:1037471/93‑1 (MQ=255)

                                              aaTAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAAt                                         <  1:1484288/93‑1 (MQ=255)

                                                 aGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCt                                      <  1:1151448/93‑1 (MQ=255)

                                                 aGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCt                                      >  2:4011390/1‑93 (MQ=255)

                                                  gggTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCCCCGAATATGTTATCGCCCTGATCCCGTTGGGGGGTTATGTCAAAATGCTg                                     >  1:4101678/1‑93 (MQ=255)

                                                  gggTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTg                                     <  2:2110931/93‑1 (MQ=255)

                                                   ggTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTgg                                    >  2:2905127/1‑93 (MQ=255)

                                                   ggTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTgg                                    <  1:4698543/93‑1 (MQ=255)

                                                     tttGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGAt                                  <  1:398658/93‑1 (MQ=255)

                                                     tttGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGAt                                  <  1:2619279/93‑1 (MQ=255)

                                                     tttGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGAt                                  <  2:4371267/93‑1 (MQ=255)

                                                       tGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGa                                <  2:3570631/93‑1 (MQ=255)

                                                       tGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGa                                <  1:119507/93‑1 (MQ=255)

                                                       tGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGa                                <  1:922559/93‑1 (MQ=255)

                                                       tGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGa                                <  1:119504/93‑1 (MQ=255)

                                                       tGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGa                                <  1:3511216/93‑1 (MQ=255)

                                                        ggTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAg                               <  1:2034720/93‑1 (MQ=255)

                                                        ggTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAg                               <  1:2116576/93‑1 (MQ=255)

                                                         gTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgc                              <  2:573745/93‑1 (MQ=255)

                                                         gTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgc                              <  1:3335963/93‑1 (MQ=255)

                                                         gTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgc                              <  2:2513743/93‑1 (MQ=255)

                                                          tAAGGAGGTCTGGCGGCGAACTTATAAGCTTGGCAACGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcg                             <  2:2992257/93‑1 (MQ=255)

                                                           aaGGCGCTCTGGCGGCGAACTGAGAAGCTTGGCACCGAATATGTTATCGCCCTGATACCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcgc                            <  2:3221741/93‑1 (MQ=255)

                                                            aGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcgcg                           <  2:1302358/93‑1 (MQ=255)

                                                             ggCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcgcgc                          >  1:2646778/1‑93 (MQ=255)

                                                             ggCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGGTGGGCGGTTATGTCAAAATGCTGGATGAgcgcgc                          >  1:1796643/1‑93 (MQ=255)

                                                               cgcTCTGGCGGCGAACTGATAAGCGTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAg                        <  2:1917814/93‑1 (MQ=255)

                                                                 ctctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGaa                      <  2:1108072/93‑1 (MQ=255)

                                                                  tctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAAc                     <  1:2421849/93‑1 (MQ=255)

                                                                   ctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAAcc                    >  1:1262806/1‑93 (MQ=255)

                                                                   ctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAAcc                    <  1:2825848/93‑1 (MQ=255)

                                                                   ctGGCGGCGAACTGATAAGCTCGGCACCGAATATGTTATCGACCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAAcc                    <  2:1275108/93‑1 (MQ=255)

                                                                    tGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCg                   >  2:2032863/1‑93 (MQ=255)

                                                                      gcggcgAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGt                 <  2:2333200/93‑1 (MQ=255)

                                                                      gcggcgAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGt                 <  2:4299543/93‑1 (MQ=255)

                                                                      gcggcgAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGt                 <  2:4085046/93‑1 (MQ=255)

                                                                       cggcgAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTc                >  1:2095688/1‑93 (MQ=255)

                                                                           gAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTCTGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTc            >  2:3778016/1‑93 (MQ=255)

                                                                           gAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTc            >  2:642862/1‑93 (MQ=255)

                                                                            aaCTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTcc           >  1:2238195/1‑93 (MQ=255)

                                                                            aaCTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTcc           <  1:1049785/93‑1 (MQ=255)

                                                                            aaCTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTcc           <  2:2269477/93‑1 (MQ=255)

                                                                               tGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGa        >  1:535832/1‑93 (MQ=255)

                                                                               tGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGa        <  2:689979/93‑1 (MQ=255)

                                                                                gATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGaa       >  2:1510320/1‑93 (MQ=255)

                                                                                gATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGaa       <  1:4697452/93‑1 (MQ=255)

                                                                                gATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGaa       >  1:205881/1‑93 (MQ=255)

                                                                                gATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGaa       >  2:2341114/1‑93 (MQ=255)

                                                                                 aTAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAAc      <  2:2079172/93‑1 (MQ=255)

                                                                                   aaGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTc    >  2:676119/1‑93 (MQ=255)

                                                                                    aGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTcc   >  1:3508505/1‑93 (MQ=255)

                                                                                     gCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTCCg  >  2:3691524/1‑93 (MQ=255)

                                                                                     gCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTCCg  <  1:3849904/93‑1 (MQ=255)

ATTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTCGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTCCG  >  NC_000913/196622‑196799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`