BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,757,874	T→C	H225R (CAT→CGT)	b1680 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,757,874	0	T	C	100.0%	382.5 / NA	116	H225R (CAT→CGT)	b1680	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (80/36); total (80/36)

Only 100 of 119 total aligned reads displayed.

AGAACCGCCCCCTTCCCACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTATGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATCCACCAGCACTTTT  >  NC_000913/1757786‑1757963

aGAACCGCCCCCTTCCCACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGccc                                                                                       >  1:1256912/1‑93 (MQ=255)

 gAACCGCCCCCTTCCCACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCg                                                                                      <  1:3941587/93‑1 (MQ=255)

  aaCCGCCCCCTTCCCACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCgg                                                                                     >  1:612436/1‑93 (MQ=255)

   aCCGCCCCCTTCCCACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGga                                                                                    <  2:3289544/93‑1 (MQ=255)

    ccGCCCCCTTCACACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGgag                                                                                   >  2:2649868/1‑93 (MQ=255)

      gCCCCCTTCCCACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGaa                                                                                 >  1:168240/1‑93 (MQ=255)

      gCCCCCTTCCCACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGaa                                                                                 <  1:2170519/93‑1 (MQ=255)

       gccccTTCCCACGGCGGCATCTCCTGCAACATGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAac                                                                                <  1:2915243/92‑1 (MQ=255)

       cccccTTCCCACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAac                                                                                >  1:3747752/1‑93 (MQ=255)

        ccccTTCCCACGGCGGCATCTCCTGCATCAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAaca                                                                               <  1:4438253/93‑1 (MQ=255)

         cccTTCCCACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAacac                                                                              >  2:1897619/1‑93 (MQ=255)

           cTTCCCACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGt                                                                            >  2:2416778/1‑93 (MQ=255)

           cTTCCCACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGt                                                                            <  2:3191803/93‑1 (MQ=255)

            ttCCCACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTa                                                                           >  1:3704631/1‑93 (MQ=255)

            ttCCCACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTa                                                                           >  1:1227485/1‑93 (MQ=255)

               ccACGGCGGCATCTCCTGCAACATGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTaaaa                                                                        <  2:2591866/93‑1 (MQ=255)

               ccACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTaaaa                                                                        >  2:4587399/1‑93 (MQ=255)

                cACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAg                                                                       <  2:1244216/93‑1 (MQ=255)

                cACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAg                                                                       <  1:3119025/93‑1 (MQ=255)

                 aCGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGACTGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGt                                                                      >  1:58419/1‑93 (MQ=255)

                   ggcggcATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCg                                                                    >  2:2067136/1‑93 (MQ=255)

                    gcggcATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGc                                                                   >  1:3734788/1‑93 (MQ=255)

                    gcggcATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGc                                                                   >  1:127261/1‑93 (MQ=255)

                    gcggcATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGc                                                                   >  1:899678/1‑93 (MQ=255)

                     cggcATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACTCCCGGAGAACACGTAAAAGTCGCa                                                                  >  2:2749852/1‑93 (MQ=255)

                      ggcATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCaa                                                                 >  2:766635/1‑93 (MQ=255)

                       gcATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAAt                                                                <  1:4203378/93‑1 (MQ=255)

                       gcATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAAt                                                                <  2:3344205/93‑1 (MQ=255)

                       gcATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAAt                                                                >  2:897072/1‑93 (MQ=255)

                       gcATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAAt                                                                >  1:202933/1‑93 (MQ=255)

                        cATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATc                                                               >  2:1250650/1‑93 (MQ=255)

                         aTCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATcc                                                              >  1:1761916/1‑93 (MQ=255)

                          tctcCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCa                                                             >  1:4227134/1‑93 (MQ=255)

                           ctcCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAg                                                            <  2:3475558/93‑1 (MQ=255)

                            tcCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGCCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAgc                                                           <  2:1987134/93‑1 (MQ=255)

                              cTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAgcgc                                                         >  1:407907/1‑93 (MQ=255)

                              cTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAgcgc                                                         >  2:4108919/1‑93 (MQ=255)

                              cTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAgcgc                                                         >  2:2659238/1‑93 (MQ=255)

                               tGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGcc                                                        >  1:3838619/1‑93 (MQ=255)

                               tGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGcc                                                        <  2:2855958/93‑1 (MQ=255)

                               tGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGcc                                                        <  2:3736801/93‑1 (MQ=255)

                                 caacaaGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTg                                                      >  1:1995773/1‑93 (MQ=255)

                                  aacaaGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGa                                                     >  2:648959/1‑93 (MQ=255)

                                    caaGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAAc                                                   >  1:1968053/1‑93 (MQ=255)

                                     aaGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACa                                                  >  2:1401766/1‑93 (MQ=255)

                                      aGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACAt                                                 <  1:3354240/93‑1 (MQ=255)

                                      aGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACAt                                                 >  1:4232316/1‑93 (MQ=255)

                                       ggCTTCTTTCACGTAAAGAATGCCACTTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTCACAGTCGCAATCCAGCGCCTGAAAATc                                                >  1:1760820/1‑93 (MQ=255)

                                       ggCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATc                                                >  2:3172534/1‑93 (MQ=255)

                                       ggCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATc                                                >  1:3676335/1‑93 (MQ=255)

                                       ggCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATc                                                >  1:2669153/1‑93 (MQ=255)

                                         cttcttTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCa                                              <  2:149122/93‑1 (MQ=255)

                                         cttcttTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCa                                              >  2:3923723/1‑93 (MQ=255)

                                           tcttTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCAcc                                            >  2:2944416/1‑93 (MQ=255)

                                            cttTCACATAAAGAATGCCAATTCCGCTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCAcag                                           >  2:1368265/1‑91 (MQ=255)

                                             tttCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCgg                                          >  2:3579059/1‑93 (MQ=255)

                                             tttCACATAAAGAATGCCAATTCCGGAGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCga                                          >  2:1267206/1‑92 (MQ=255)

                                                cacaTAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGgatg                                       >  2:1897662/1‑93 (MQ=255)

                                                    tAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGc                                   >  2:666998/1‑93 (MQ=255)

                                                     aaaGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCa                                  >  2:2232258/1‑93 (MQ=255)

                                                      aaGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCAt                                 >  2:499408/1‑93 (MQ=255)

                                                      aaGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCAt                                 >  2:499407/1‑93 (MQ=255)

                                                       aGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCACTCCAGCGCCTGAACATCCACCGGATGATGCATc                                >  1:4575640/1‑93 (MQ=255)

                                                       aGAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATc                                <  2:1442322/93‑1 (MQ=255)

                                                        gAATGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCa                               >  2:47378/1‑93 (MQ=255)

                                                         aaTGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCAc                              <  1:2570035/93‑1 (MQ=255)

                                                          aTGCCAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCAcc                             >  1:736217/1‑93 (MQ=255)

                                                             ccAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGcc                          <  1:4092553/93‑1 (MQ=255)

                                                              cAATTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCt                         >  1:4703830/1‑93 (MQ=255)

                                                               aaTTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTg                        <  2:730525/93‑1 (MQ=255)

                                                                cttCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGa                       <  1:33678/92‑1 (MQ=255)

                                                                aTTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGa                       >  1:1898717/1‑93 (MQ=255)

                                                                aTTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGa                       >  1:4423752/1‑93 (MQ=255)

                                                                aTTCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGa                       >  2:2151470/1‑93 (MQ=255)

                                                                 ttCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAg                      >  1:3591656/1‑93 (MQ=255)

                                                                 ttCCGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAg                      <  1:316426/93‑1 (MQ=255)

                                                                   ccGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAgcg                    <  2:1454517/93‑1 (MQ=255)

                                                                   ccGGTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAgcg                    >  2:2133317/1‑93 (MQ=255)

                                                                     ggTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGcc                  <  2:3696419/93‑1 (MQ=255)

                                                                     ggTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGcc                  >  2:1369349/1‑93 (MQ=255)

                                                                      gTGGGGCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGGGCCa                 >  1:2957024/1‑93 (MQ=255)

                                                                        ggggCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATc               >  2:2992588/1‑93 (MQ=255)

                                                                         gggCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATcc              >  2:3184242/1‑93 (MQ=255)

                                                                         gggCCATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATcc              >  2:3184241/1‑93 (MQ=255)

                                                                             cATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATccacca          <  1:1895772/93‑1 (MQ=255)

                                                                             cATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATccacca          >  2:1829145/1‑93 (MQ=255)

                                                                             cATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATccacca          <  2:4557441/93‑1 (MQ=255)

                                                                             cATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATccacca          >  1:2505126/1‑93 (MQ=255)

                                                                             cATACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATccacca          >  1:2100478/1‑93 (MQ=255)

                                                                              aTACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATCCACCAg         >  2:3162356/1‑93 (MQ=255)

                                                                              aTACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATCCACCAg         >  2:2210636/1‑93 (MQ=255)

                                                                               tACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATCCACCAGc        >  1:2816096/1‑93 (MQ=255)

                                                                               tACAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATCCACCAGc        >  2:4345194/1‑93 (MQ=255)

                                                                                 cAGTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATCCACCAGCAc      <  2:1776724/93‑1 (MQ=255)

                                                                                   gTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATCCACCAGCACtt    >  1:1766750/1‑93 (MQ=255)

                                                                                   gTTTACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATCCACCAGCACtt    <  1:3640851/93‑1 (MQ=255)

                                                                                    tttACGCCCGGAGAACACGTAGAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATCCACCAGCACttt   <  2:470680/93‑1 (MQ=255)

                                                                                    tttACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATCCACCAGCACttt   <  2:2869389/93‑1 (MQ=255)

                                                                                     ttACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATCCACCAGCACtttt  <  2:2949336/93‑1 (MQ=255)

                                                                                     ttACGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATCCACCAGCACtttt  <  2:3910781/93‑1 (MQ=255)

AGAACCGCCCCCTTCCCACGGCGGCATCTCCTGCAACAAGGCTTCTTTCACATAAAGAATGCCAATTCCGGTGGGGCCATACAGTTTATGCCCGGAGAACACGTAAAAGTCGCAATCCAGCGCCTGAACATCCACCGGATGATGCATCACCGCCTGAGCGCCATCCACCAGCACTTTT  >  NC_000913/1757786‑1757963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`