BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,779,462	T→C	V15A (GTT→GCT)	ydiS →	YdiS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,779,462	0	T	C	99.0%	324.1 / NA	102	V15A (GTT→GCT)	ydiS	YdiS
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (56/45); total (57/45)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 113 total aligned reads displayed.

TCAACCACATCTCCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGTTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCGGATGTAAAAA  >  NC_000913/1779372‑1779549

tCAACCACATCTCCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTg                                                                                       >  2:848775/1‑93 (MQ=255)

tCAACCACATCTCCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTg                                                                                       <  1:3771118/93‑1 (MQ=255)

tCAACCACATCTCCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTg                                                                                       >  1:1390997/1‑93 (MQ=255)

 cAACCACATCTCCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGc                                                                                      <  1:3975371/93‑1 (MQ=255)

 cAACCACACCTCCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGc                                                                                      <  2:4161510/93‑1 (MQ=255)

    ccACATCTCCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTgg                                                                                   >  2:649049/1‑93 (MQ=255)

    ccACATCTCCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTgg                                                                                   >  2:649048/1‑93 (MQ=255)

     cacaTCTCCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGt                                                                                  <  1:4280036/93‑1 (MQ=255)

      acaTCTCCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTa                                                                                 >  2:895468/1‑93 (MQ=255)

      acaTCTCCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGCGAGGGCGCTGCTGGTa                                                                                 >  2:103475/1‑93 (MQ=255)

      acaTCTCCCGCTATAGACGCAGCGGGAAGGGAGCATAACGCATATCGGATGACAAATTTGATGCCATTGTGGTCGAAGCGGGCGCTGCTGGTa                                                                                 <  2:4211993/93‑1 (MQ=255)

       caTCTCCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAg                                                                                >  1:2760634/1‑93 (MQ=255)

        aTCTCCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGc                                                                               >  2:3622923/1‑93 (MQ=255)

        aTCTCCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGc                                                                               <  2:2880281/93‑1 (MQ=255)

         tctcCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCg                                                                              >  1:3764821/1‑93 (MQ=255)

         tctcCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCg                                                                              >  1:2856613/1‑93 (MQ=255)

          cccccGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGt                                                                             <  1:2987468/91‑1 (MQ=255)

           tcCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGtt                                                                            <  2:1773681/93‑1 (MQ=255)

           tcCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGtt                                                                            >  1:589820/1‑93 (MQ=255)

            cccGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTg                                                                           >  2:3282109/1‑93 (MQ=255)

             ccGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGc                                                                          >  2:1170252/1‑93 (MQ=255)

             ccGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGc                                                                          <  1:2667644/93‑1 (MQ=255)

             ccGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGc                                                                          <  2:4677901/93‑1 (MQ=255)

             ccGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGc                                                                          <  2:2037440/93‑1 (MQ=255)

               gCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCg                                                                        <  1:2107791/93‑1 (MQ=255)

               gCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCg                                                                        >  2:1373048/1‑93 (MQ=255)

                cTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGc                                                                       >  1:3899120/1‑93 (MQ=255)

                cTGAAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGCCAACTGTGATCGCATTGTGCTCGTTCCGGGCGCTGCTGGCAGCGTTGCCGc                                                                       >  1:3899121/1‑93 (MQ=255)

                     aaCGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTgg                                                                  >  1:1204457/1‑93 (MQ=255)

                     aaCGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTgg                                                                  >  2:4654713/1‑93 (MQ=255)

                        gCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTct                                                               >  2:3684801/1‑92 (MQ=255)

                        gCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCa                                                               <  2:2016655/93‑1 (MQ=255)

                        gCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCa                                                               <  2:1243072/93‑1 (MQ=255)

                          aGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATg                                                             <  2:706715/93‑1 (MQ=255)

                             gggAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCa                                                          >  2:4301943/1‑93 (MQ=255)

                             gggAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCa                                                          <  1:2693858/93‑1 (MQ=255)

                              ggAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCAc                                                         <  2:4396502/93‑1 (MQ=255)

                              ggAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCAc                                                         >  2:4487112/1‑93 (MQ=255)

                               gAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACg                                                        <  2:3940137/93‑1 (MQ=255)

                                aaGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGa                                                       <  2:597469/93‑1 (MQ=255)

                                 aGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAg                                                      <  2:3254400/93‑1 (MQ=255)

                                 aGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAg                                                      >  2:1865585/1‑93 (MQ=255)

                                 aGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAg                                                      >  1:2263644/1‑93 (MQ=255)

                                 aGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAg                                                      >  1:3012716/1‑93 (MQ=255)

                                  gggAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGc                                                     >  1:3534698/1‑93 (MQ=255)

                                   ggAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGcc                                                    <  2:2181892/93‑1 (MQ=255)

                                    gAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCg                                                   <  2:406006/93‑1 (MQ=255)

                                     aGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCgg                                                  >  1:3844183/1‑93 (MQ=255)

                                      gCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCggg                                                 >  2:3317314/1‑93 (MQ=255)

                                      gCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCACTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCggg                                                 <  2:264518/93‑1 (MQ=255)

                                       cATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGc                                                <  1:614866/93‑1 (MQ=255)

                                        aTAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCt                                               <  1:1472004/93‑1 (MQ=255)

                                        aTAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCt                                               >  1:4548602/1‑93 (MQ=255)

                                         tAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTg                                              >  1:74265/1‑93 (MQ=255)

                                          aaCGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTgg                                             <  1:135178/93‑1 (MQ=255)

                                          aaCGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGGCATGGCACGAGCCGGGCTgg                                             >  2:1283232/1‑93 (MQ=255)

                                           aCGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTggt                                            >  2:1775837/1‑92 (MQ=255)

                                           aCGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGa                                            <  2:3128800/93‑1 (MQ=255)

                                           aCGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGa                                            <  2:937388/93‑1 (MQ=255)

                                            cGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGAt                                           <  2:4300529/93‑1 (MQ=255)

                                             gCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATg                                          >  2:1367575/1‑93 (MQ=255)

                                               aTGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTc                                        <  1:2028534/93‑1 (MQ=255)

                                                tGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTcc                                       <  2:3421309/93‑1 (MQ=255)

                                                tGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCACGGCACGAGCCGGGCTGGATGTcc                                       >  1:887936/1‑93 (MQ=255)

                                                 gTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCt                                      >  1:1372287/1‑93 (MQ=255)

                                                    ggATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTggg                                   >  1:1258724/1‑92 (MQ=255)

                                                    ggATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTggg                                   >  2:1515502/1‑92 (MQ=255)

                                                    ggATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCAAGAGCCGGGCTGGATGGCCTggg                                   >  2:857528/1‑92 (MQ=255)

                                                     gATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTg                                  >  1:1108509/1‑93 (MQ=255)

                                                       tGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGAt                                >  2:4253924/1‑93 (MQ=255)

                                                        gACAAATTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATa                               >  2:2403651/1‑93 (MQ=255)

                                                           aaaTTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGaa                            <  1:2635167/93‑1 (MQ=255)

                                                           aaaTTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGaa                            <  2:3114977/93‑1 (MQ=255)

                                                            aaTTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAAc                           >  1:2073245/1‑93 (MQ=255)

                                                            aaTTTGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAAc                           <  2:4200250/93‑1 (MQ=255)

                                                              tttGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAAcgc                         >  2:2076798/1‑93 (MQ=255)

                                                              tttGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAAcgc                         >  1:1260641/1‑93 (MQ=255)

                                                                tGATGCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACgcgg                       <  2:2337356/93‑1 (MQ=255)

                                                                    gCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGAc                   >  2:4095991/1‑93 (MQ=255)

                                                                    gCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGAc                   >  2:2190631/1‑93 (MQ=255)

                                                                    gCCATTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGAc                   <  2:1805024/93‑1 (MQ=255)

                                                                      cATTGGGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGGGATAGAACGCGGCGACAg                 >  2:595905/1‑93 (MQ=255)

                                                                       aTTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGt                >  2:3987014/1‑93 (MQ=255)

                                                                       aTTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGt                >  2:3114092/1‑93 (MQ=255)

                                                                       aTTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGt                <  1:77746/93‑1 (MQ=255)

                                                                       aTTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGt                >  2:3114089/1‑93 (MQ=255)

                                                                       aTTGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGt                <  1:2001719/93‑1 (MQ=255)

                                                                       aTTGTGGTAGGGGGGGGCGCTGCAGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGAATGTCCTGGTGATAGAACGCAGCGACacc                >  2:3114233/1‑91 (MQ=255)

                                                                        ttGTGGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTg               >  2:1071936/1‑93 (MQ=255)

                                                                          gtgGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGcc             >  1:2211785/1‑93 (MQ=255)

                                                                          gtgGTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGcc             <  2:2244991/93‑1 (MQ=255)

                                                                          gtgGTCGGTGCGGGCGCTGCTGGTAGCGTTGCAGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGcc             <  2:3545050/93‑1 (MQ=255)

                                                                            ggTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGACGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCgg           >  1:3017311/1‑93 (MQ=255)

                                                                             gTCGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCGGa          <  2:3416886/93‑1 (MQ=255)

                                                                               cGGTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCGGATg        <  1:1315493/93‑1 (MQ=255)

                                                                                ggTGCGGGGGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCGGgtgt       >  2:2207352/1‑93 (MQ=255)

                                                                                ggTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCGGATGt       >  2:2280162/1‑93 (MQ=255)

                                                                                 gTGCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCGGATGTa      <  1:4368143/93‑1 (MQ=255)

                                                                                   gCGGGCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCGGATGTaaa    >  2:237177/1‑93 (MQ=255)

                                                                                     gggCGCTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCGGATGTaaaaa  >  1:1017152/1‑93 (MQ=255)

TCAACCACATCTCCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGTTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCGGATGTAAAAA  >  NC_000913/1779372‑1779549

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`